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RDH16


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
8608 retinol dehydrogenase 16 (all-trans) chr12 -57350918 - 57356418 57351418

Transcription Factor Binding Sites

 
Download all TFBS in the RDH16 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
FOXC1_forkhead_DBD_monomeric_11_1 SELEX - 57351413 57351423 9.0E-06 AGAATAAATAT 11
EWSR1-FLI1_MA0149.1 JASPAR + 57349580 57349597 1.0E-06 GGAAGAAAGCAAGGTTGC 18
SOX15_HMG_full_dimeric_15_3 SELEX + 57349528 57349542 8.0E-06 ATCAGTAACATTTTT 15
TFAP2B_TFAP_DBD_dimeric_12_1 SELEX + 57351351 57351362 6.0E-06 AGCCCTCAGGCA 12
REL_MA0101.1 JASPAR + 57349555 57349564 9.0E-06 GGGGAATTCC 10
ATF4_bZIP_DBD_dimeric_13_1 SELEX - 57349592 57349604 6.0E-06 GGGTGACGCAACC 13
Atf4_bZIP_DBD_dimeric_14_1 SELEX - 57349592 57349605 5.0E-06 GGGGTGACGCAACC 14
HNF4A_nuclearreceptor_full_dimeric_15_1 SELEX + 57349693 57349707 1.0E-05 TAGTCCCAAGTTCAC 15
PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 57349398 57349412 6.0E-06 AAAGAGGGAGAGTGA 15
TFAP2C_TFAP_full_dimeric_12_1 SELEX + 57351351 57351362 8.0E-06 AGCCCTCAGGCA 12
TFAP2A_TFAP_DBD_dimeric_12_1 SELEX + 57351351 57351362 6.0E-06 AGCCCTCAGGCA 12
Tcfap2a_TFAP_DBD_dimeric_12_1 SELEX + 57351351 57351362 8.0E-06 AGCCCTCAGGCA 12
FOXO1_forkhead_DBD_dimeric_14_1 SELEX - 57351407 57351420 1.0E-05 ATAAATATGTTGCA 14
V_MTF1_01_M01242 TRANSFAC + 57351463 57351482 3.0E-06 TCATGCACACCTTTGCACAC 20
V_TAXCREB_01_M00114 TRANSFAC - 57349593 57349607 3.0E-06 GTGGGGTGACGCAAC 15
V_CDX2_Q5_01_M01659 TRANSFAC - 57349537 57349547 1.0E-05 TCTATAAAAAT 11
V_EVI1_05_M00082 TRANSFAC + 57349391 57349401 1.0E-05 AGACAAGAAAG 11
V_BTEB3_Q5_M01865 TRANSFAC - 57349619 57349631 9.0E-06 CAGAGGGTGGAGT 13
V_XFD1_01_M00267 TRANSFAC - 57351410 57351423 8.0E-06 AGAATAAATATGTT 14
V_SMAD3_Q6_01_M01888 TRANSFAC + 57351258 57351270 5.0E-06 GGACAGACACAGA 13
V_CREB_Q4_M00178 TRANSFAC - 57349592 57349603 8.0E-06 GGTGACGCAACC 12
V_RELBP52_01_M01239 TRANSFAC + 57349555 57349564 6.0E-06 GGGGAATTCC 10
V_P50P50_Q3_M01223 TRANSFAC + 57349554 57349566 8.0E-06 AGGGGAATTCCAA 13
V_EAR2_Q2_M01728 TRANSFAC + 57351437 57351450 8.0E-06 TGCTCTTTGAACTG 14
V_MAF_Q6_M00648 TRANSFAC + 57349457 57349472 7.0E-06 TTGGGGGAACTTGGGA 16
V_HOXD13_01_M01404 TRANSFAC - 57349535 57349550 1.0E-06 CTTTCTATAAAAATGT 16
V_CETS1P54_02_M00074 TRANSFAC - 57349472 57349484 2.0E-06 AAACAGGATGTTT 13
V_ELF4_04_M02850 TRANSFAC - 57349533 57349549 5.0E-06 TTTCTATAAAAATGTTA 17
V_TST1_01_M00133 TRANSFAC + 57349555 57349569 5.0E-06 GGGGAATTCCAATGC 15
V_GATA3_05_M02859 TRANSFAC - 57351499 57351520 8.0E-06 GTAGGAAGATAGTATCTTCCTA 22
V_CREL_01_M00053 TRANSFAC + 57349555 57349564 9.0E-06 GGGGAATTCC 10
V_MAZ_Q6_01_M02023 TRANSFAC - 57349647 57349660 1.0E-06 GTAGGAGGAGAGGG 14
V_HNF3ALPHA_Q6_M00724 TRANSFAC + 57351414 57351424 8.0E-06 TATTTATTCTG 11
V_TATA_C_M00216 TRANSFAC - 57349538 57349547 1.0E-06 TCTATAAAAA 10
V_NFE4_Q5_M02105 TRANSFAC + 57349645 57349656 5.0E-06 CACCCTCTCCTC 12
V_EVI1_Q3_M02002 TRANSFAC - 57349392 57349400 6.0E-06 TTTCTTGTC 9
V_GR_Q6_M00192 TRANSFAC - 57351320 57351338 2.0E-06 ACAGCCCTCTGTGTTCTTA 19
V_XFD2_01_M00268 TRANSFAC - 57351410 57351423 8.0E-06 AGAATAAATATGTT 14
V_NKX3A_01_M00451 TRANSFAC - 57351152 57351163 8.0E-06 AGATAAGTATGT 12
V_TAL1_01_M01591 TRANSFAC - 57349389 57349401 7.0E-06 CTTTCTTGTCTCT 13
V_GATA3_02_M00350 TRANSFAC - 57351156 57351165 8.0E-06 AGAGATAAGT 10
V_CREB_Q2_M00177 TRANSFAC - 57349592 57349603 5.0E-06 GGTGACGCAACC 12
V_TBX15_02_M01264 TRANSFAC - 57351475 57351492 1.0E-06 AGGACTTGAGGTGTGCAA 18
V_PITX2_Q2_M00482 TRANSFAC + 57349691 57349701 7.0E-06 TTTAGTCCCAA 11
V_SREBP1_02_M00221 TRANSFAC + 57349597 57349607 2.0E-06 CGTCACCCCAC 11
V_EWSR1FLI1_01_M02252 TRANSFAC + 57349580 57349597 1.0E-06 GGAAGAAAGCAAGGTTGC 18
V_EFC_Q6_M00626 TRANSFAC - 57349482 57349495 7.0E-06 AAACACTTGGGAAA 14
V_AP2ALPHA_02_M01045 TRANSFAC - 57351350 57351364 1.0E-06 AATGCCTGAGGGCTT 15
V_DMRT1_01_M01146 TRANSFAC + 57349530 57349544 9.0E-06 CAGTAACATTTTTAT 15
V_SEF1_C_M00214 TRANSFAC + 57351324 57351342 0.0E+00 AACACAGAGGGCTGTGGTA 19
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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