Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

OR6A2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 8590 olfactory receptor, family 6, subfamily A, member 2 chr11 - 6816639 - 6822139 6817139 Transcription Factor Binding Sites   Download all TFBS in the OR6A2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NKX2-8_homeodomain_full_monomeric_9_1 SELEX + 6820735 6820743 3.0E-06 CCACTTGAA 9 POU3F2_POU_DBD_monomeric_13_1 SELEX - 6820842 6820854 5.0E-06 TTTGCATACATTT 13 POU5F1P1_POU_DBD_monomeric_9_1 SELEX + 6820847 6820855 8.0E-06 TATGCAAAA 9 POU2F3_POU_DBD_monomeric_9_1 SELEX + 6820847 6820855 8.0E-06 TATGCAAAA 9 Pou2f2_POU_DBD_monomeric_9_1 SELEX + 6820847 6820855 7.0E-06 TATGCAAAA 9 FOXB1_forkhead_DBD_putative-multimer_14_1 SELEX + 6820881 6820894 9.0E-06 AGATGATACAGAGA 14 MAFK_bZIP_full_dimeric_15_1 SELEX - 6820787 6820801 9.0E-06 TTGATGAGTCAGTGA 15 NKX2-3_homeodomain_full_monomeric_10_1 SELEX + 6820734 6820743 1.0E-06 ACCACTTGAA 10 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 6820897 6820911 4.0E-06 AGGAAGAGAAAGTGG 15 V_POU3F3_01_M03090 TRANSFAC + 6820843 6820859 5.0E-06 AATGTATGCAAAAAAAG 17 V_OCT1_Q5_01_M00930 TRANSFAC - 6820847 6820857 3.0E-06 TTTTTTGCATA 11 V_OCTAMER_01_M01324 TRANSFAC + 6820843 6820859 5.0E-06 AATGTATGCAAAAAAAG 17 V_IRF2_Q6_M01882 TRANSFAC - 6820897 6820912 9.0E-06 GAGGAAGAGAAAGTGG 16 V_OCT1_01_M00135 TRANSFAC + 6820842 6820860 6.0E-06 AAATGTATGCAAAAAAAGT 19 V_NKX25_Q6_M02108 TRANSFAC + 6820734 6820744 5.0E-06 ACCACTTGAAG 11 V_POU2F3_01_M01476 TRANSFAC + 6820844 6820859 9.0E-06 ATGTATGCAAAAAAAG 16 V_PU1_Q4_M01172 TRANSFAC + 6820898 6820916 5.0E-06 CACTTTCTCTTCCTCCCAT 19 V_AP1_Q6_M00174 TRANSFAC - 6820859 6820869 6.0E-06 GATGACTCAAC 11 V_TST1_01_M00133 TRANSFAC + 6820833 6820847 0.0E+00 GAGGATTTAAAATGT 15 V_AP1_Q6_01_M00925 TRANSFAC - 6820860 6820868 2.0E-06 ATGACTCAA 9 V_IRF_Q6_M00772 TRANSFAC + 6820896 6820910 1.0E-06 TCCACTTTCTCTTCC 15 V_NKX22_02_M01372 TRANSFAC + 6820731 6820747 1.0E-06 TTGACCACTTGAAGAGG 17 V_ISRE_01_M00258 TRANSFAC + 6820898 6820912 1.0E-05 CACTTTCTCTTCCTC 15 V_OCT1_04_M00138 TRANSFAC + 6820840 6820862 2.0E-06 TAAAATGTATGCAAAAAAAGTTG 23 V_TEL2_Q6_M00678 TRANSFAC + 6815236 6815245 1.0E-06 TTACTTCCTG 10 V_AP1_C_M00199 TRANSFAC - 6820790 6820798 3.0E-06 ATGAGTCAG 9 V_OCT1_B_M00342 TRANSFAC + 6820847 6820856 5.0E-06 TATGCAAAAA 10 V_AP1_Q2_01_M00924 TRANSFAC - 6820856 6820867 9.0E-06 TGACTCAACTTT 12 V_OCT_Q6_M00795 TRANSFAC - 6820847 6820857 2.0E-06 TTTTTTGCATA 11 V_ICSBP_Q6_M00699 TRANSFAC - 6820898 6820909 3.0E-06 GAAGAGAAAGTG 12 V_MAF_Q6_01_M00983 TRANSFAC - 6820790 6820800 4.0E-06 TGATGAGTCAG 11 V_MAF_Q6_01_M00983 TRANSFAC + 6820858 6820868 7.0E-06 AGTTGAGTCAT 11 V_AP1_Q4_01_M00926 TRANSFAC + 6820861 6820868 1.0E-05 TGAGTCAT 8 V_GATA1_05_M00346 TRANSFAC + 6820753 6820762 2.0E-06 GCAGATAACA 10 V_POU5F1_01_M01307 TRANSFAC + 6820847 6820856 2.0E-06 TATGCAAAAA 10 V_EHF_06_M02745 TRANSFAC - 6815236 6815250 5.0E-06 AGGTGCAGGAAGTAA 15 V_OCT2_01_M01368 TRANSFAC + 6820844 6820859 5.0E-06 ATGTATGCAAAAAAAG 16 V_PITX1_01_M01484 TRANSFAC + 6820829 6820845 6.0E-06 AGGAGAGGATTTAAAAT 17 V_FRA1_Q5_M01267 TRANSFAC + 6820861 6820868 1.0E-05 TGAGTCAT 8 V_NRF2_Q4_M00821 TRANSFAC - 6820789 6820801 1.0E-06 TTGATGAGTCAGT 13 V_IRF1_Q6_01_M01881 TRANSFAC + 6820898 6820911 5.0E-06 CACTTTCTCTTCCT 14 V_NFE2_01_M00037 TRANSFAC + 6820788 6820798 8.0E-06 CACTGACTCAT 11 V_GATA5_03_M02756 TRANSFAC + 6820750 6820766 9.0E-06 TCAGCAGATAACAGAAT 17 V_CMAF_01_M01070 TRANSFAC - 6820742 6820760 9.0E-06 TTATCTGCTGATTCCTCTT 19

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.