Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

PSKH2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 85481 protein serine kinase H2 chr8 - 87081351 - 87086851 87081851 Transcription Factor Binding Sites   Download all TFBS in the PSKH2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints MSX2_homeodomain_DBD_dimeric_18_1 SELEX - 87085482 87085499 6.0E-06 CTACTTAGAAGCTCATTA 18 SOX10_HMG_full_dimeric_15_3 SELEX - 87081441 87081455 2.0E-06 TTGAAATGTAGTCAT 15 BARX1_homeodomain_DBD_dimeric_17_1 SELEX - 87085471 87085487 7.0E-06 TCATTATTATTTGTTTA 17 TBR1_TBX_DBD_monomeric_10_1 SELEX + 87085424 87085433 6.0E-06 ACGTGTGAAA 10 SOX21_HMG_DBD_dimeric_13_2 SELEX - 87081442 87081454 4.0E-06 TGAAATGTAGTCA 13 FOXF2_MA0030.1 JASPAR + 87085465 87085478 8.0E-06 TTCCCATAAACAAA 14 FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 87085471 87085482 6.0E-06 TAAACAAATAAT 12 FOXL1_forkhead_full_dimeric_13_1 SELEX + 87085469 87085481 1.0E-06 CATAAACAAATAA 13 SOX9_HMG_full_dimeric_17_3 SELEX - 87081440 87081456 1.0E-06 TTTGAAATGTAGTCATC 17 POU1F1_POU_DBD_monomeric_14_1 SELEX + 87079226 87079239 4.0E-06 TAAATGCTAATTTA 14 SOX7_HMG_full_dimeric_17_2 SELEX - 87081440 87081456 2.0E-06 TTTGAAATGTAGTCATC 17 POU2F2_POU_DBD_monomeric_11_1 SELEX + 87079227 87079237 8.0E-06 AAATGCTAATT 11 POU3F3_POU_DBD_monomeric_13_1 SELEX + 87079226 87079238 1.0E-06 TAAATGCTAATTT 13 POU6F2_POU_DBD_dimeric_16_1 SELEX + 87085481 87085496 3.0E-06 ATAATGAGCTTCTAAG 16 POU6F2_POU_DBD_dimeric_16_1 SELEX - 87085481 87085496 2.0E-06 CTTAGAAGCTCATTAT 16 Sox17_HMG_DBD_dimeric_15_2 SELEX - 87081441 87081455 5.0E-06 TTGAAATGTAGTCAT 15 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 87085470 87085480 1.0E-06 ATAAACAAATA 11 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX + 87085470 87085483 7.0E-06 ATAAACAAATAATA 14 FOXI1_MA0042.1 JASPAR - 87085472 87085483 2.0E-06 TATTATTTGTTT 12 Lhx3_MA0135.1 JASPAR + 87079282 87079294 6.0E-06 GAATTAATCATAT 13 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 87085470 87085480 1.0E-06 ATAAACAAATA 11 MAFK_bZIP_DBD_dimeric_21_1 SELEX + 87079226 87079246 5.0E-06 TAAATGCTAATTTATCGCTAT 21 MAFK_bZIP_DBD_dimeric_21_1 SELEX - 87079226 87079246 9.0E-06 ATAGCGATAAATTAGCATTTA 21 Msx3_homeodomain_DBD_dimeric_18_1 SELEX - 87079226 87079243 7.0E-06 GCGATAAATTAGCATTTA 18 Msx3_homeodomain_DBD_dimeric_18_1 SELEX - 87085482 87085499 6.0E-06 CTACTTAGAAGCTCATTA 18 HESX1_homeodomain_DBD_dimeric_15_1 SELEX - 87079225 87079239 7.0E-06 TAAATTAGCATTTAC 15 POU3F1_POU_DBD_monomeric_12_1 SELEX + 87079227 87079238 2.0E-06 AAATGCTAATTT 12 Foxd3_MA0041.1 JASPAR - 87085431 87085442 8.0E-06 CATTGTTGGTTT 12 Foxd3_MA0041.1 JASPAR - 87085472 87085483 1.0E-06 TATTATTTGTTT 12 LHX9_homeodomain_DBD_dimeric_13_1 SELEX + 87079226 87079238 3.0E-06 TAAATGCTAATTT 13 POU2F1_POU_DBD_monomeric_12_1 SELEX + 87079226 87079237 9.0E-06 TAAATGCTAATT 12 SOX18_HMG_full_dimeric_15_3 SELEX - 87081441 87081455 8.0E-06 TTGAAATGTAGTCAT 15 Sox3_HMG_DBD_dimeric_17_3 SELEX - 87081440 87081456 3.0E-06 TTTGAAATGTAGTCATC 17 POU3F2_POU_DBD_monomeric_12_1 SELEX + 87079227 87079238 2.0E-06 AAATGCTAATTT 12 MSX1_homeodomain_DBD_dimeric_18_1 SELEX - 87079226 87079243 6.0E-06 GCGATAAATTAGCATTTA 18 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 87085467 87085484 9.0E-06 CCCATAAACAAATAATAA 18 MSX1_homeodomain_DBD_dimeric_18_1 SELEX - 87085482 87085499 7.0E-06 CTACTTAGAAGCTCATTA 18 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 87085468 87085480 6.0E-06 CCATAAACAAATA 13 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 87085472 87085484 6.0E-06 AAACAAATAATAA 13 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 87085470 87085483 1.0E-06 ATAAACAAATAATA 14 V_DBX1_01_M01483 TRANSFAC + 87085471 87085487 0.0E+00 TAAACAAATAATAATGA 17 V_FREAC7_01_M00293 TRANSFAC + 87085465 87085480 2.0E-06 TTCCCATAAACAAATA 16 V_TCF3_01_M01594 TRANSFAC - 87081446 87081458 1.0E-06 CCTTTGAAATGTA 13 V_SRY_07_M02813 TRANSFAC + 87085474 87085489 4.0E-06 ACAAATAATAATGAGC 16 V_MAFK_03_M02776 TRANSFAC + 87079224 87079238 9.0E-06 TGTAAATGCTAATTT 15 V_EVI1_04_M00081 TRANSFAC - 87079282 87079296 2.0E-06 TGATATGATTAATTC 15 V_FOXD3_01_M00130 TRANSFAC - 87085472 87085483 0.0E+00 TATTATTTGTTT 12 V_SPDEF_04_M02915 TRANSFAC - 87085493 87085508 1.0E-06 AAAGACATCCTACTTA 16 V_MEF2_02_M00231 TRANSFAC + 87079059 87079080 5.0E-06 TTAGTAATCTTAAATAGATTCT 22 V_SRY_02_M00160 TRANSFAC + 87085470 87085481 9.0E-06 ATAAACAAATAA 12 V_OTX_Q1_M01117 TRANSFAC - 87079283 87079290 5.0E-06 GATTAATT 8 V_OCT1_01_M00135 TRANSFAC + 87079223 87079241 3.0E-06 TTGTAAATGCTAATTTATC 19 V_POU2F3_01_M01476 TRANSFAC + 87079225 87079240 6.0E-06 GTAAATGCTAATTTAT 16 V_POU1F1_Q6_M00744 TRANSFAC - 87079283 87079292 5.0E-06 ATGATTAATT 10 V_FOXO3A_Q1_M01137 TRANSFAC + 87085469 87085480 3.0E-06 CATAAACAAATA 12 V_HNF3_Q6_01_M01012 TRANSFAC - 87085468 87085485 0.0E+00 ATTATTATTTGTTTATGG 18 V_FOXJ1_03_M02750 TRANSFAC + 87085467 87085482 2.0E-06 CCCATAAACAAATAAT 16 V_HFH4_01_M00742 TRANSFAC - 87085471 87085483 0.0E+00 TATTATTTGTTTA 13 V_AIRE_02_M01000 TRANSFAC + 87085488 87085512 0.0E+00 GCTTCTAAGTAGGATGTCTTTGTGT 25 V_SOX21_03_M02803 TRANSFAC - 87085474 87085489 7.0E-06 GCTCATTATTATTTGT 16 V_STAT4_Q4_M01666 TRANSFAC + 87085465 87085478 1.0E-06 TTCCCATAAACAAA 14 V_TCF3_04_M02816 TRANSFAC + 87081446 87081462 7.0E-06 TACATTTCAAAGGGATG 17 V_ZFP105_03_M02827 TRANSFAC + 87085473 87085487 1.0E-06 AACAAATAATAATGA 15 V_GATA3_05_M02859 TRANSFAC - 87079281 87079302 4.0E-06 TTTGTTTGATATGATTAATTCT 22 V_OLF1_01_M00261 TRANSFAC + 87085342 87085363 4.0E-06 TCCTTTTCCCCAAGGTGTAGGG 22 V_IRF3_Q3_M01279 TRANSFAC + 87079084 87079096 2.0E-06 CCCTTTTCCCTTT 13 V_HNF3_Q6_M00791 TRANSFAC + 87085470 87085482 0.0E+00 ATAAACAAATAAT 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 87085470 87085480 0.0E+00 TATTTGTTTAT 11 V_PBX1_01_M00096 TRANSFAC + 87079284 87079292 1.0E-05 ATTAATCAT 9 V_OCT1_04_M00138 TRANSFAC + 87079221 87079243 5.0E-06 CTTTGTAAATGCTAATTTATCGC 23 V_OCT1_08_M01354 TRANSFAC + 87085476 87085491 9.0E-06 AAATAATAATGAGCTT 16 V_PIT1_01_M01465 TRANSFAC + 87079279 87079295 4.0E-06 ACAGAATTAATCATATC 17 V_MEF2_Q6_01_M00941 TRANSFAC + 87085392 87085403 9.0E-06 GGCTCTTTTAAG 12 V_NCX_02_M01420 TRANSFAC + 87085471 87085487 1.0E-06 TAAACAAATAATAATGA 17 V_NKX63_01_M01470 TRANSFAC + 87085476 87085492 9.0E-06 AAATAATAATGAGCTTC 17 V_AML2_Q3_01_M01854 TRANSFAC - 87086142 87086152 5.0E-06 CCTCACCATAG 11 V_SOX15_03_M02799 TRANSFAC - 87079266 87079282 8.0E-06 CTGTGAACAAATGAGTT 17 V_POU6F1_02_M01462 TRANSFAC + 87085477 87085493 0.0E+00 AATAATAATGAGCTTCT 17 V_BRN4_01_M01473 TRANSFAC + 87079279 87079295 3.0E-06 ACAGAATTAATCATATC 17 V_OCT2_01_M01368 TRANSFAC + 87079225 87079240 4.0E-06 GTAAATGCTAATTTAT 16 V_TCF4_Q5_M00671 TRANSFAC - 87081451 87081458 1.0E-05 CCTTTGAA 8 V_FOX_Q2_M00809 TRANSFAC - 87085471 87085483 0.0E+00 TATTATTTGTTTA 13 V_PBX1_03_M01017 TRANSFAC + 87079291 87079302 3.0E-06 ATATCAAACAAA 12 V_BBX_03_M02739 TRANSFAC - 87079273 87079287 8.0E-06 TAATTCTGTGAACAA 15 V_OCT1_07_M00248 TRANSFAC + 87079226 87079237 1.0E-06 TAAATGCTAATT 12 V_HFH3_01_M00289 TRANSFAC - 87085471 87085483 1.0E-06 TATTATTTGTTTA 13 V_POU6F1_03_M01479 TRANSFAC + 87085477 87085493 0.0E+00 AATAATAATGAGCTTCT 17 V_FOXJ2_01_M00422 TRANSFAC + 87085464 87085481 8.0E-06 CTTCCCATAAACAAATAA 18 V_FOXJ2_01_M00422 TRANSFAC + 87085468 87085485 0.0E+00 CCATAAACAAATAATAAT 18 V_HOXD8_01_M01432 TRANSFAC + 87085471 87085487 3.0E-06 TAAACAAATAATAATGA 17 V_FOXO4_01_M00472 TRANSFAC + 87085470 87085480 1.0E-06 ATAAACAAATA 11 V_EHF_07_M02849 TRANSFAC + 87086133 87086148 1.0E-05 AATAAGTTCCTATGGT 16 V_STAT1_05_M01260 TRANSFAC - 87085455 87085476 5.0E-06 TGTTTATGGGAAGAAAACTGTG 22 V_SOX14_03_M02798 TRANSFAC + 87085474 87085489 3.0E-06 ACAAATAATAATGAGC 16 V_SOX14_03_M02798 TRANSFAC - 87085474 87085489 3.0E-06 GCTCATTATTATTTGT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.