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SCIN


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
85477 scinderin chr7 +12605202 - 12610702 12610202

Transcription Factor Binding Sites

 
Download all TFBS in the SCIN promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
MESP1_bHLH_DBD_dimeric_10_1 SELEX - 12609510 12609519 4.0E-06 AACACCTGCT 10
PAX6_PAX_DBD_monomeric_19_1 SELEX - 12609403 12609421 4.0E-06 TTTTATGCTTGGCCGGACT 19
SOX10_HMG_full_dimeric_15_3 SELEX - 12606857 12606871 4.0E-06 TTCAATTTCAGTGAT 15
IRF7_IRF_DBD_dimeric_14_1 SELEX - 12606803 12606816 1.0E-06 ATGAAAGTGAAATT 14
IRF7_IRF_DBD_dimeric_14_1 SELEX + 12606861 12606874 6.0E-06 CTGAAATTGAAACT 14
IRF7_IRF_DBD_dimeric_14_1 SELEX + 12606867 12606880 4.0E-06 TTGAAACTGAAATT 14
ZNF713_C2H2_full_monomeric_17_1 SELEX + 12609418 12609434 6.0E-06 AAAATTACAGCCACAAA 17
FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 12609474 12609490 8.0E-06 GAAAACAACAACAAAAA 17
IRF8_IRF_full_dimeric_14_1 SELEX - 12606803 12606816 4.0E-06 ATGAAAGTGAAATT 14
IRF8_IRF_full_dimeric_14_1 SELEX + 12606861 12606874 2.0E-06 CTGAAATTGAAACT 14
IRF8_IRF_full_dimeric_14_1 SELEX + 12606867 12606880 1.0E-06 TTGAAACTGAAATT 14
Mafb_bZIP_DBD_monomeric_12_1 SELEX + 12609903 12609914 6.0E-06 TAAACGCTGACT 12
SOX8_HMG_full_dimeric_17_1 SELEX - 12606856 12606872 1.0E-06 TTTCAATTTCAGTGATC 17
IRF7_IRF_DBD_trimeric_17_1 SELEX - 12606797 12606813 6.0E-06 AAAGTGAAATTCCCTCT 17
Sox1_HMG_DBD_dimeric_13_1 SELEX + 12606858 12606870 5.0E-06 TCACTGAAATTGA 13
Sox1_HMG_DBD_dimeric_13_1 SELEX - 12606858 12606870 1.0E-06 TCAATTTCAGTGA 13
OTX2_homeodomain_DBD_dimeric_15_1 SELEX - 12609983 12609997 0.0E+00 GCTAATCCTCTTATT 15
LEF1_HMG_DBD_monomeric_15_1 SELEX - 12606806 12606820 3.0E-06 ATAGATGAAAGTGAA 15
IRF1_MA0050.1 JASPAR + 12606863 12606874 2.0E-06 GAAATTGAAACT 12
TCF4_bHLH_full_dimeric_10_1 SELEX - 12609510 12609519 7.0E-06 AACACCTGCT 10
NR2E1_nuclearreceptor_full_dimeric_14_1 SELEX + 12612702 12612715 2.0E-06 AAGTAAAATAGTCA 14
SOX14_HMG_DBD_dimeric_13_1 SELEX - 12606858 12606870 1.0E-06 TCAATTTCAGTGA 13
Mafb_bZIP_DBD_dimeric_17_1 SELEX - 12609905 12609921 9.0E-06 AGAGTTGAGTCAGCGTT 17
Otx1_homeodomain_DBD_dimeric_15_1 SELEX - 12609983 12609997 1.0E-06 GCTAATCCTCTTATT 15
TBX20_TBX_full_dimeric_16_1 SELEX + 12612656 12612671 8.0E-06 AAGTGTTCTTGTGTCA 16
Foxd3_MA0041.1 JASPAR + 12606928 12606939 3.0E-06 TTATATTTTTTT 12
IRF9_IRF_full_trimeric_15_1 SELEX + 12606860 12606874 1.0E-06 ACTGAAATTGAAACT 15
IRF9_IRF_full_trimeric_15_1 SELEX + 12606866 12606880 1.0E-06 ATTGAAACTGAAATT 15
PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 12606801 12606815 4.0E-06 TGAAAGTGAAATTCC 15
PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 12612637 12612651 5.0E-06 AAAAAATGAGAGTAC 15
IRF4_IRF_full_dimeric_15_1 SELEX + 12606861 12606875 1.0E-06 CTGAAATTGAAACTG 15
IRF4_IRF_full_dimeric_15_1 SELEX + 12606867 12606881 4.0E-06 TTGAAACTGAAATTG 15
SRY_HMG_DBD_dimeric_13_1 SELEX - 12606858 12606870 5.0E-06 TCAATTTCAGTGA 13
CPEB1_RRM_full_monomeric_8_1 SELEX - 12606832 12606839 4.0E-06 AATAAAAA 8
IRF5_IRF_full_dimeric_14_1 SELEX + 12606861 12606874 5.0E-06 CTGAAATTGAAACT 14
IRF5_IRF_full_dimeric_14_1 SELEX + 12606867 12606880 3.0E-06 TTGAAACTGAAATT 14
RUNX1_MA0002.2 JASPAR + 12612599 12612609 1.0E-06 TTCTGTGGTTA 11
IRF3_IRF_full_trimeric_21_1 SELEX + 12606855 12606875 6.0E-06 TGATCACTGAAATTGAAACTG 21
IRF3_IRF_full_trimeric_21_1 SELEX + 12606861 12606881 0.0E+00 CTGAAATTGAAACTGAAATTG 21
Sox1_HMG_DBD_dimeric_15_1 SELEX - 12606857 12606871 8.0E-06 TTCAATTTCAGTGAT 15
MSC_bHLH_full_dimeric_10_1 SELEX - 12612741 12612750 9.0E-06 AAGAGCTGTT 10
TCF3_bHLH_DBD_dimeric_10_1 SELEX - 12609510 12609519 2.0E-06 AACACCTGCT 10
IRF2_MA0051.1 JASPAR + 12606862 12606879 2.0E-06 TGAAATTGAAACTGAAAT 18
V_FOXP1_01_M00987 TRANSFAC + 12606924 12606943 8.0E-06 GTTCTTATATTTTTTTTCGT 20
V_FOXP1_01_M00987 TRANSFAC - 12609418 12609437 9.0E-06 CTGTTTGTGGCTGTAATTTT 20
V_FOXP1_01_M00987 TRANSFAC + 12609471 12609490 9.0E-06 GGGTTTTTGTTGTTGTTTTC 20
V_FOXP1_01_M00987 TRANSFAC + 12609477 12609496 2.0E-06 TTGTTGTTGTTTTCATCTTT 20
V_OBOX6_01_M01445 TRANSFAC + 12609984 12609998 2.0E-06 ATAAGAGGATTAGCG 15
V_FOXP3_Q4_M00992 TRANSFAC - 12606817 12606833 8.0E-06 AAGAAGCTTTGGCATAG 17
V_AR_02_M00953 TRANSFAC + 12609834 12609860 7.0E-06 TAGCAGAGGAAGCCTTGTTCTAAGAAT 27
V_GATA1_Q6_M02004 TRANSFAC + 12606971 12606985 3.0E-06 TCTACAGATAAGGAA 15
V_BCL6B_03_M02740 TRANSFAC + 12609848 12609863 9.0E-06 TTGTTCTAAGAATTAT 16
V_RHOX11_01_M01347 TRANSFAC + 12609509 12609525 7.0E-06 AAGCAGGTGTTAAGAGA 17
V_OBOX1_01_M01450 TRANSFAC + 12609984 12610000 5.0E-06 ATAAGAGGATTAGCGAG 17
V_FOXD3_01_M00130 TRANSFAC + 12606928 12606939 3.0E-06 TTATATTTTTTT 12
V_BCL6_01_M01183 TRANSFAC - 12612891 12612906 8.0E-06 TAACCAAATGTTCTTT 16
V_HP1SITEFACTOR_Q6_M00725 TRANSFAC + 12612708 12612719 0.0E+00 AATAGTCAACAG 12
V_HOXA13_02_M01297 TRANSFAC - 12606832 12606840 4.0E-06 AAATAAAAA 9
V_FOXJ1_04_M02854 TRANSFAC - 12609474 12609488 5.0E-06 AAACAACAACAAAAA 15
V_ZTA_Q2_M00711 TRANSFAC + 12609904 12609916 8.0E-06 AAACGCTGACTCA 13
V_IRF_Q6_01_M00972 TRANSFAC - 12606804 12606814 1.0E-06 GAAAGTGAAAT 11
V_IRF_Q6_01_M00972 TRANSFAC + 12606863 12606873 3.0E-06 GAAATTGAAAC 11
V_IRF_Q6_01_M00972 TRANSFAC + 12606869 12606879 2.0E-06 GAAACTGAAAT 11
V_IRF2_Q6_M01882 TRANSFAC - 12606801 12606816 1.0E-06 ATGAAAGTGAAATTCC 16
V_IRF2_Q6_M01882 TRANSFAC + 12606861 12606876 1.0E-06 CTGAAATTGAAACTGA 16
V_IRF2_Q6_M01882 TRANSFAC + 12606867 12606882 0.0E+00 TTGAAACTGAAATTGA 16
V_P50P50_Q3_M01223 TRANSFAC + 12606798 12606810 1.0E-06 GAGGGAATTTCAC 13
V_STAT5B_01_M00459 TRANSFAC - 12609848 12609862 5.0E-06 TAATTCTTAGAACAA 15
V_TCFAP2E_04_M02926 TRANSFAC - 12606931 12606944 2.0E-06 GACGAAAAAAAATA 14
V_TCFAP2E_04_M02926 TRANSFAC + 12612627 12612640 1.0E-06 TTAGAGAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC + 12612628 12612641 1.0E-06 TAGAGAAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC + 12612629 12612642 6.0E-06 AGAGAAAAAAAAAA 14
V_LDSPOLYA_B_M00317 TRANSFAC - 12605192 12605207 2.0E-06 AGTGTGTTTTCTCTCT 6
V_RHOX11_02_M01384 TRANSFAC + 12609509 12609525 5.0E-06 AAGCAGGTGTTAAGAGA 17
V_STAT4_Q4_M01666 TRANSFAC - 12606897 12606910 8.0E-06 TTAAGATAATTTAA 14
V_TAL1_GATA1_01_M02243 TRANSFAC + 12606965 12606982 2.0E-06 TTTCAGTCTACAGATAAG 18
V_COMP1_01_M00057 TRANSFAC + 12609985 12610008 1.0E-06 TAAGAGGATTAGCGAGAGAAGGGG 24
V_SOX13_03_M02797 TRANSFAC - 12609854 12609869 5.0E-06 TCTAGAATAATTCTTA 16
V_TCF3_04_M02816 TRANSFAC - 12606805 12606821 5.0E-06 CATAGATGAAAGTGAAA 17
V_TCF3_04_M02816 TRANSFAC + 12606840 12606856 9.0E-06 TCTTCAACAAAGAAATG 17
V_PR_Q2_M00960 TRANSFAC + 12609876 12609885 1.0E-06 GAAAGAACAG 10
V_PR_Q2_M00960 TRANSFAC + 12612890 12612899 4.0E-06 AAAAGAACAT 10
V_ZFP105_03_M02827 TRANSFAC - 12606829 12606843 1.0E-06 AAGAAATAAAAAGAA 15
V_ZFP105_03_M02827 TRANSFAC - 12609474 12609488 2.0E-06 AAACAACAACAAAAA 15
V_ZFP105_03_M02827 TRANSFAC - 12609477 12609491 2.0E-06 TGAAAACAACAACAA 15
V_ZFP105_03_M02827 TRANSFAC + 12612631 12612645 3.0E-06 AGAAAAAAAAAATGA 15
V_ZFP105_03_M02827 TRANSFAC + 12612632 12612646 9.0E-06 GAAAAAAAAAATGAG 15
V_RUNX1_01_M02257 TRANSFAC + 12612599 12612609 1.0E-06 TTCTGTGGTTA 11
V_HOXB9_01_M01426 TRANSFAC - 12605270 12605285 4.0E-06 GGATCCATTAAACTCC 16
V_FOXK1_04_M02856 TRANSFAC - 12609472 12609486 9.0E-06 ACAACAACAAAAACC 15
V_FOXK1_04_M02856 TRANSFAC - 12609475 12609489 0.0E+00 AAAACAACAACAAAA 15
V_E47_02_M00071 TRANSFAC + 12609507 12609522 6.0E-06 GGAAGCAGGTGTTAAG 16
V_IRF_Q6_M00772 TRANSFAC - 12606863 12606877 0.0E+00 TTCAGTTTCAATTTC 15
V_IRF_Q6_M00772 TRANSFAC - 12606869 12606883 2.0E-06 CTCAATTTCAGTTTC 15
V_ISRE_01_M00258 TRANSFAC - 12606861 12606875 0.0E+00 CAGTTTCAATTTCAG 15
V_USF_02_M00122 TRANSFAC + 12606954 12606967 3.0E-06 AGAACACATGATTT 14
V_USF_02_M00122 TRANSFAC - 12606954 12606967 3.0E-06 AAATCATGTGTTCT 14
V_PITX3_01_M01343 TRANSFAC + 12609986 12610001 3.0E-06 AAGAGGATTAGCGAGA 16
V_OCT1_08_M01354 TRANSFAC - 12606895 12606910 9.0E-06 TTAAGATAATTTAAAA 16
Tal1_Gata1_MA0140.1 JASPAR + 12606965 12606982 2.0E-06 TTTCAGTCTACAGATAAG 18
V_IRF4_03_M02768 TRANSFAC + 12606863 12606877 6.0E-06 GAAATTGAAACTGAA 15
V_TCF7_03_M02817 TRANSFAC - 12606805 12606821 5.0E-06 CATAGATGAAAGTGAAA 17
V_TCF7_03_M02817 TRANSFAC - 12609481 12609497 9.0E-06 GAAAGATGAAAACAACA 17
V_MAFK_Q3_M02022 TRANSFAC - 12609906 12609916 5.0E-06 TGAGTCAGCGT 11
V_STAT4_Q5_M02117 TRANSFAC + 12612904 12612913 2.0E-06 TTAAAGGAAA 10
V_ISGF3G_03_M02771 TRANSFAC + 12606862 12606876 0.0E+00 TGAAATTGAAACTGA 15
V_BLIMP1_Q6_M01066 TRANSFAC - 12606801 12606816 3.0E-06 ATGAAAGTGAAATTCC 16
V_ICSBP_Q6_M00699 TRANSFAC + 12606864 12606875 9.0E-06 AAATTGAAACTG 12
V_HOXD9_Q2_M01834 TRANSFAC + 12609412 12609421 4.0E-06 AAGCATAAAA 10
V_GR_Q6_02_M01836 TRANSFAC - 12612891 12612903 6.0E-06 CCAAATGTTCTTT 13
V_ELF1_Q6_M00746 TRANSFAC + 12610001 12610012 7.0E-06 AGAAGGGGAAAT 12
V_MTF1_06_M02882 TRANSFAC - 12609483 12609496 6.0E-06 AAAGATGAAAACAA 14
V_MTF1_06_M02882 TRANSFAC + 12612629 12612642 4.0E-06 AGAGAAAAAAAAAA 14
V_IRF5_03_M02769 TRANSFAC + 12606862 12606876 9.0E-06 TGAAATTGAAACTGA 15
V_AP4_01_M00005 TRANSFAC + 12609530 12609547 8.0E-06 AACCACAGCTCCTGAACT 18
V_FAC1_01_M00456 TRANSFAC - 12609474 12609487 0.0E+00 AACAACAACAAAAA 14
V_FOXL1_02_M02857 TRANSFAC - 12609479 12609494 8.0E-06 AGATGAAAACAACAAC 16
V_PITX1_01_M01484 TRANSFAC + 12609984 12610000 4.0E-06 ATAAGAGGATTAGCGAG 17
V_RHOX11_05_M03099 TRANSFAC + 12609509 12609525 5.0E-06 AAGCAGGTGTTAAGAGA 17
V_IRF1_Q6_01_M01881 TRANSFAC + 12606802 12606815 1.0E-06 GAATTTCACTTTCA 14
V_IRF1_Q6_01_M01881 TRANSFAC - 12606862 12606875 1.0E-06 CAGTTTCAATTTCA 14
V_IRF1_Q6_01_M01881 TRANSFAC - 12606868 12606881 0.0E+00 CAATTTCAGTTTCA 14
V_STAT5A_01_M00457 TRANSFAC - 12609848 12609862 8.0E-06 TAATTCTTAGAACAA 15
V_SRF_06_M02916 TRANSFAC - 12606928 12606944 7.0E-06 GACGAAAAAAAATATAA 17
V_SRF_06_M02916 TRANSFAC - 12606930 12606946 7.0E-06 CTGACGAAAAAAAATAT 17
V_SRF_06_M02916 TRANSFAC + 12612625 12612641 3.0E-06 CTTTAGAGAAAAAAAAA 17
V_SRF_06_M02916 TRANSFAC + 12612626 12612642 3.0E-06 TTTAGAGAAAAAAAAAA 17
V_SRF_06_M02916 TRANSFAC + 12612627 12612643 2.0E-06 TTAGAGAAAAAAAAAAT 17
V_SRF_06_M02916 TRANSFAC + 12612629 12612645 1.0E-06 AGAGAAAAAAAAAATGA 17
V_SRF_06_M02916 TRANSFAC + 12612630 12612646 8.0E-06 GAGAAAAAAAAAATGAG 17
V_SRF_06_M02916 TRANSFAC + 12612684 12612700 1.0E-05 GGAGAGAAAAAAAGCTT 17
V_GSC_01_M01428 TRANSFAC - 12609985 12610001 1.0E-06 TCTCGCTAATCCTCTTA 17
V_PR_02_M00957 TRANSFAC - 12609873 12609899 5.0E-06 GGGTGGAGCAATACCTGTTCTTTCTGG 27
V_SOX15_04_M02903 TRANSFAC - 12612774 12612788 1.0E-05 TTGGATGAAATTCTG 15
V_MEF2_01_M00006 TRANSFAC + 12609851 12609866 7.0E-06 TTCTAAGAATTATTCT 16
V_GATA5_03_M02756 TRANSFAC + 12606971 12606987 2.0E-06 TCTACAGATAAGGAAAC 17
V_HOXA10_01_M01464 TRANSFAC - 12606829 12606844 3.0E-06 GAAGAAATAAAAAGAA 16
V_SOX5_07_M02909 TRANSFAC + 12609853 12609869 9.0E-06 CTAAGAATTATTCTAGA 17
V_GATA6_04_M02757 TRANSFAC + 12606971 12606987 8.0E-06 TCTACAGATAAGGAAAC 17
V_OBOX6_02_M03068 TRANSFAC + 12609984 12609998 2.0E-06 ATAAGAGGATTAGCG 15
V_RHOX11_06_M03100 TRANSFAC + 12609509 12609525 7.0E-06 AAGCAGGTGTTAAGAGA 17
V_TCF3_05_M02920 TRANSFAC - 12606931 12606945 0.0E+00 TGACGAAAAAAAATA 15
V_TCF3_05_M02920 TRANSFAC + 12612628 12612642 4.0E-06 TAGAGAAAAAAAAAA 15
V_TCF3_05_M02920 TRANSFAC + 12612629 12612643 0.0E+00 AGAGAAAAAAAAAAT 15
V_DTYPEPA_B_M00334 TRANSFAC - 12605273 12605282 6.0E-06 TCCATTAAAC 10
V_PAX2_02_M00486 TRANSFAC - 12605271 12605279 3.0E-06 ATTAAACTC 9
V_SPI1_02_M02043 TRANSFAC + 12610004 12610013 8.0E-06 AGGGGAAATA 10
V_PAX6_01_M00097 TRANSFAC - 12609404 12609424 9.0E-06 TAATTTTATGCTTGGCCGGAC 21
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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