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SYDE1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
85360 synapse defective 1, Rho GTPase, homolog 1 (C. elegans) chr19 +15213213 - 15218713 15218213

Transcription Factor Binding Sites

 
Download all TFBS in the SYDE1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
EWSR1-FLI1_MA0149.1 JASPAR + 15218632 15218649 6.0E-06 GGGTGGAGGGGAGGAGGG 18
EWSR1-FLI1_MA0149.1 JASPAR + 15219302 15219319 5.0E-06 GGAAGACAGGAGGGAGGG 18
SP1_MA0079.2 JASPAR - 15218641 15218650 9.0E-06 CCCCTCCTCC 10
znf143_MA0088.1 JASPAR + 15217900 15217919 5.0E-06 CATCACCCAGAGTCCCATCC 20
ZSCAN4_C2H2_full_monomeric_15_1 SELEX + 15219169 15219183 4.0E-06 AACACACACAGGAAA 15
TEAD3_TEA_DBD_dimeric_17_1 SELEX - 15218108 15218124 2.0E-06 ACATTCCGGGAATGCTT 17
FEV_MA0156.1 JASPAR + 15218601 15218608 1.0E-05 CAGGAAAT 8
TEAD1_TEA_full_dimeric_17_1 SELEX - 15218108 15218124 1.0E-06 ACATTCCGGGAATGCTT 17
Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 15218085 15218097 5.0E-06 GAAAAAAAAAAAA 13
Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 15218086 15218098 6.0E-06 AAAAAAAAAAAAA 13
FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 15218085 15218098 8.0E-06 GAAAAAAAAAAAAA 14
V_HMGIY_Q3_M01010 TRANSFAC - 15218086 15218100 1.0E-05 ACTTTTTTTTTTTTT 15
V_EVI1_04_M00081 TRANSFAC + 15218084 15218098 4.0E-06 GGAAAAAAAAAAAAA 15
V_SP1_03_M02281 TRANSFAC - 15218641 15218650 9.0E-06 CCCCTCCTCC 10
V_SP1_02_M01303 TRANSFAC + 15218140 15218150 3.0E-06 GGGGCGGGGGG 11
V_SP1_02_M01303 TRANSFAC + 15218170 15218180 3.0E-06 GGGGCGGGGAG 11
V_PU1_Q4_M01172 TRANSFAC - 15218078 15218096 1.0E-06 TTTTTTTTTTTCCCCTTTC 19
V_TCFAP2E_04_M02926 TRANSFAC + 15218080 15218093 2.0E-06 AAGGGGAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC + 15218085 15218098 3.0E-06 GAAAAAAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC + 15218086 15218099 4.0E-06 AAAAAAAAAAAAAG 14
V_ELF4_04_M02850 TRANSFAC + 15218082 15218098 6.0E-06 GGGGAAAAAAAAAAAAA 17
V_ELF4_04_M02850 TRANSFAC + 15218084 15218100 1.0E-06 GGAAAAAAAAAAAAAGT 17
V_ELF4_04_M02850 TRANSFAC + 15218085 15218101 5.0E-06 GAAAAAAAAAAAAAGTT 17
V_ELF4_04_M02850 TRANSFAC + 15218086 15218102 9.0E-06 AAAAAAAAAAAAAGTTT 17
V_ZNF219_01_M01122 TRANSFAC - 15218141 15218152 5.0E-06 CGCCCCCCGCCC 12
V_ZFP105_03_M02827 TRANSFAC + 15218084 15218098 4.0E-06 GGAAAAAAAAAAAAA 15
V_ZFP105_03_M02827 TRANSFAC + 15218085 15218099 2.0E-06 GAAAAAAAAAAAAAG 15
V_ZFP105_03_M02827 TRANSFAC + 15218086 15218100 2.0E-06 AAAAAAAAAAAAAGT 15
V_ZFP105_03_M02827 TRANSFAC + 15218087 15218101 1.0E-06 AAAAAAAAAAAAGTT 15
V_IRF3_Q3_M01279 TRANSFAC - 15218080 15218092 9.0E-06 TTTTTTTCCCCTT 13
V_MAZ_Q6_01_M02023 TRANSFAC + 15218169 15218182 8.0E-06 CGGGGCGGGGAGGG 14
V_MAZ_Q6_01_M02023 TRANSFAC + 15218633 15218646 6.0E-06 GGTGGAGGGGAGGA 14
V_AP2BETA_Q3_M01858 TRANSFAC - 15219099 15219114 3.0E-06 GGGAAGGCCTGGGGGG 16
V_STAF_02_M00264 TRANSFAC + 15217901 15217921 5.0E-06 ATCACCCAGAGTCCCATCCAG 21
V_SP4_Q5_M01273 TRANSFAC - 15218139 15218149 7.0E-06 CCCCCGCCCCG 11
V_ZFP187_04_M02934 TRANSFAC - 15219263 15219278 0.0E+00 GGGCCCTTGTCCCTCA 16
V_MTF1_06_M02882 TRANSFAC + 15218086 15218099 1.0E-06 AAAAAAAAAAAAAG 14
V_FAC1_01_M00456 TRANSFAC + 15218085 15218098 9.0E-06 GAAAAAAAAAAAAA 14
V_CNOT3_01_M01253 TRANSFAC - 15218190 15218199 4.0E-06 GGCCGCGCCG 10
V_CAAT_C_M00200 TRANSFAC - 15217847 15217871 9.0E-06 TCCAAATCGCAGCCTCCACGTATCC 25
V_FPM315_01_M01587 TRANSFAC + 15218638 15218649 4.0E-06 AGGGGAGGAGGG 12
V_STAT_01_M00223 TRANSFAC + 15218113 15218121 7.0E-06 TTCCCGGAA 9
V_ETS1_B_M00339 TRANSFAC + 15218600 15218614 7.0E-06 ACAGGAAATGGGGCC 15
V_SRF_06_M02916 TRANSFAC + 15218081 15218097 6.0E-06 AGGGGAAAAAAAAAAAA 17
V_SRF_06_M02916 TRANSFAC + 15218082 15218098 0.0E+00 GGGGAAAAAAAAAAAAA 17
V_SRF_06_M02916 TRANSFAC + 15218083 15218099 1.0E-06 GGGAAAAAAAAAAAAAG 17
V_SRF_06_M02916 TRANSFAC + 15218084 15218100 0.0E+00 GGAAAAAAAAAAAAAGT 17
V_SRF_06_M02916 TRANSFAC + 15218085 15218101 0.0E+00 GAAAAAAAAAAAAAGTT 17
V_SRF_06_M02916 TRANSFAC + 15218086 15218102 0.0E+00 AAAAAAAAAAAAAGTTT 17
V_EWSR1FLI1_01_M02252 TRANSFAC + 15218632 15218649 6.0E-06 GGGTGGAGGGGAGGAGGG 18
V_EWSR1FLI1_01_M02252 TRANSFAC + 15219302 15219319 5.0E-06 GGAAGACAGGAGGGAGGG 18
V_TCF3_05_M02920 TRANSFAC + 15218080 15218094 3.0E-06 AAGGGGAAAAAAAAA 15
V_TCF3_05_M02920 TRANSFAC + 15218081 15218095 0.0E+00 AGGGGAAAAAAAAAA 15
V_TCF3_05_M02920 TRANSFAC + 15218082 15218096 0.0E+00 GGGGAAAAAAAAAAA 15
V_TCF3_05_M02920 TRANSFAC + 15218083 15218097 4.0E-06 GGGAAAAAAAAAAAA 15
V_FEV_01_M02269 TRANSFAC + 15218601 15218608 1.0E-05 CAGGAAAT 8
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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