Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

CST7 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 8530 cystatin F (leukocystatin) chr20 + 24924865 - 24930365 24929865 Transcription Factor Binding Sites   Download all TFBS in the CST7 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HOXD12_homeodomain_DBD_monomeric_9_1 SELEX + 24929529 24929537 9.0E-06 GTAATTAAA 9 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX + 24929529 24929538 2.0E-06 GTAATTAAAA 10 Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX + 24929529 24929538 1.0E-06 GTAATTAAAA 10 EMX2_homeodomain_DBD_dimeric_14_1 SELEX + 24929522 24929535 2.0E-06 AACTTAAGTAATTA 14 EMX2_homeodomain_DBD_dimeric_14_1 SELEX - 24929522 24929535 5.0E-06 TAATTACTTAAGTT 14 POU3F2_POU_DBD_monomeric_13_1 SELEX + 24932238 24932250 3.0E-06 TGAGAATAAATTA 13 POU3F4_POU_DBD_monomeric_11_1 SELEX + 24932240 24932250 4.0E-06 AGAATAAATTA 11 PDX1_homeodomain_DBD_monomeric_8_1 SELEX + 24929529 24929536 5.0E-06 GTAATTAA 8 ZNF232_C2H2_full_monomeric_19_1 SELEX + 24929537 24929555 7.0E-06 AAGAAAAAGGAAAATCAAG 19 ISX_homeodomain_DBD_dimeric_13_1 SELEX + 24929524 24929536 9.0E-06 CTTAAGTAATTAA 13 IRF7_IRF_DBD_trimeric_17_1 SELEX + 24929541 24929557 3.0E-06 AAAAGGAAAATCAAGTG 17 HOXA1_homeodomain_DBD_monomeric_10_1 SELEX + 24929528 24929537 2.0E-06 AGTAATTAAA 10 HOXB5_homeodomain_DBD_monomeric_10_1 SELEX + 24929528 24929537 2.0E-06 AGTAATTAAA 10 Dlx2_homeodomain_DBD_monomeric_8_1 SELEX + 24929529 24929536 5.0E-06 GTAATTAA 8 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX + 24929528 24929537 4.0E-06 AGTAATTAAA 10 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX + 24929529 24929537 7.0E-06 GTAATTAAA 9 Hoxa2_homeodomain_DBD_monomeric_10_1 SELEX + 24929528 24929537 5.0E-06 AGTAATTAAA 10 HOXB2_homeodomain_DBD_monomeric_10_1 SELEX + 24929528 24929537 1.0E-06 AGTAATTAAA 10 HOXC11_homeodomain_full_monomeric_11_2 SELEX + 24929528 24929538 3.0E-06 AGTAATTAAAA 11 Pou2f2_POU_DBD_dimeric_14_1 SELEX - 24929566 24929579 6.0E-06 CAGGAATTTTCAAA 14 SP1_MA0079.2 JASPAR - 24932280 24932289 7.0E-06 CCCCGCCCCC 10 Creb3l2_bZIP_DBD_dimeric_13_1 SELEX + 24932511 24932523 8.0E-06 TGCCATGTCATCC 13 MEOX2_homeodomain_DBD_monomeric_10_1 SELEX + 24929528 24929537 0.0E+00 AGTAATTAAA 10 SP4_C2H2_full_monomeric_17_1 SELEX + 24929815 24929831 4.0E-06 CTAGCCCCGCCCCTGCC 17 ATF4_bZIP_DBD_dimeric_13_1 SELEX - 24929629 24929641 9.0E-06 TCCTGATGCAATG 13 Atf4_bZIP_DBD_dimeric_14_1 SELEX - 24929629 24929642 4.0E-06 ATCCTGATGCAATG 14 VAX1_homeodomain_DBD_monomeric_8_1 SELEX - 24929529 24929536 9.0E-06 TTAATTAC 8 MIXL1_homeodomain_full_monomeric_10_1 SELEX + 24929528 24929537 8.0E-06 AGTAATTAAA 10 MAFK_bZIP_DBD_dimeric_21_1 SELEX - 24929762 24929782 1.0E-05 GTTTTGCTGCTGAATCATTTT 21 GSX2_homeodomain_DBD_monomeric_10_1 SELEX + 24929528 24929537 2.0E-06 AGTAATTAAA 10 EN1_homeodomain_full_dimeric_14_1 SELEX - 24929522 24929535 6.0E-06 TAATTACTTAAGTT 14 Hoxd3_homeodomain_DBD_monomeric_10_1 SELEX + 24929528 24929537 2.0E-06 AGTAATTAAA 10 HOXB3_homeodomain_DBD_monomeric_10_1 SELEX + 24929528 24929537 0.0E+00 AGTAATTAAA 10 Hltf_MA0109.1 JASPAR + 24929698 24929707 2.0E-06 AAACTTTTAT 10 VAX2_homeodomain_DBD_monomeric_8_1 SELEX - 24929529 24929536 5.0E-06 TTAATTAC 8 MEOX1_homeodomain_full_monomeric_10_1 SELEX + 24929528 24929537 5.0E-06 AGTAATTAAA 10 GSX1_homeodomain_DBD_monomeric_10_1 SELEX + 24929528 24929537 4.0E-06 AGTAATTAAA 10 REST_MA0138.2 JASPAR + 24932409 24932429 6.0E-06 TTCAGAACCTAGGAAATTGCC 21 EMX1_homeodomain_DBD_dimeric_14_1 SELEX + 24929522 24929535 4.0E-06 AACTTAAGTAATTA 14 EMX1_homeodomain_DBD_dimeric_14_1 SELEX - 24929522 24929535 6.0E-06 TAATTACTTAAGTT 14 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX + 24929528 24929538 2.0E-06 AGTAATTAAAA 11 MNX1_homeodomain_DBD_monomeric_10_1 SELEX + 24929528 24929537 0.0E+00 AGTAATTAAA 10 NFE2L2_MA0150.1 JASPAR + 24929765 24929775 2.0E-06 ATGATTCAGCA 11 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX + 24929528 24929538 1.0E-06 AGTAATTAAAA 11 Meox2_homeodomain_DBD_monomeric_8_1 SELEX - 24929529 24929536 9.0E-06 TTAATTAC 8 V_RUSH1A_02_M01107 TRANSFAC + 24929698 24929707 2.0E-06 AAACTTTTAT 10 V_HOXA9_01_M01351 TRANSFAC + 24929526 24929542 3.0E-06 TAAGTAATTAAAAGAAA 17 V_TST1_02_M01316 TRANSFAC - 24929522 24929538 1.0E-06 TTTTAATTACTTAAGTT 17 V_TST1_02_M01316 TRANSFAC + 24929523 24929539 3.0E-06 ACTTAAGTAATTAAAAG 17 V_MSX3_01_M01341 TRANSFAC + 24929524 24929539 5.0E-06 CTTAAGTAATTAAAAG 16 V_DBX1_01_M01483 TRANSFAC + 24929526 24929542 0.0E+00 TAAGTAATTAAAAGAAA 17 V_AML_Q6_M00769 TRANSFAC + 24930556 24930570 0.0E+00 ATGCCTGTGGTTAGC 15 V_HMGIY_Q3_M01010 TRANSFAC - 24929542 24929556 2.0E-06 ACTTGATTTTCCTTT 15 V_NKX29_01_M01352 TRANSFAC - 24929522 24929538 1.0E-06 TTTTAATTACTTAAGTT 17 V_NKX29_01_M01352 TRANSFAC + 24929523 24929539 9.0E-06 ACTTAAGTAATTAAAAG 17 V_BCL6_01_M01183 TRANSFAC - 24929527 24929542 9.0E-06 TTTCTTTTAATTACTT 16 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC - 24929564 24929575 0.0E+00 AATTTTCAAAAG 12 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC + 24932242 24932253 8.0E-06 AATAAATTACAG 12 V_STAT_Q6_M00777 TRANSFAC + 24932486 24932498 3.0E-06 ATCTCTTCTGGGA 13 V_SP1_Q6_01_M00931 TRANSFAC - 24929818 24929827 4.0E-06 GGGGCGGGGC 10 V_ISL2_01_M01328 TRANSFAC - 24929522 24929537 1.0E-06 TTTAATTACTTAAGTT 16 V_ISL2_01_M01328 TRANSFAC - 24929548 24929563 1.0E-05 CAAAATCACTTGATTT 16 V_IRF2_Q6_M01882 TRANSFAC + 24929538 24929553 6.0E-06 AGAAAAAGGAAAATCA 16 V_NFAT3_Q3_M01734 TRANSFAC - 24929544 24929553 3.0E-06 TGATTTTCCT 10 V_CEBP_Q2_M00190 TRANSFAC + 24929628 24929641 8.0E-06 ACATTGCATCAGGA 14 V_SP1_03_M02281 TRANSFAC - 24932280 24932289 7.0E-06 CCCCGCCCCC 10 V_SPZ1_01_M00446 TRANSFAC + 24932269 24932283 7.0E-06 TGAGGGGGGTAGGGG 15 V_DLX2_01_M01468 TRANSFAC - 24929524 24929539 3.0E-06 CTTTTAATTACTTAAG 16 V_HOXC6_01_M01406 TRANSFAC - 24929524 24929540 5.0E-06 TCTTTTAATTACTTAAG 17 V_HOXC6_01_M01406 TRANSFAC + 24929525 24929541 1.0E-06 TTAAGTAATTAAAAGAA 17 V_AREB6_04_M00415 TRANSFAC + 24932461 24932469 8.0E-06 CTGTTTCTT 9 V_LHX3A_01_M00510 TRANSFAC + 24929527 24929536 2.0E-06 AAGTAATTAA 10 V_TCFAP2E_04_M02926 TRANSFAC + 24929530 24929543 4.0E-06 TAATTAAAAGAAAA 14 V_NRSE_B_M00325 TRANSFAC + 24932409 24932429 1.0E-06 TTCAGAACCTAGGAAATTGCC 21 V_GC_01_M00255 TRANSFAC - 24929816 24929829 8.0E-06 CAGGGGCGGGGCTA 14 V_HELIOSA_02_M01004 TRANSFAC + 24929541 24929551 1.0E-06 AAAAGGAAAAT 11 V_HOXA6_01_M01392 TRANSFAC - 24929524 24929539 4.0E-06 CTTTTAATTACTTAAG 16 V_DBX2_01_M01360 TRANSFAC - 24929526 24929541 2.0E-06 TTCTTTTAATTACTTA 16 V_GFI1_01_M00250 TRANSFAC - 24929545 24929568 2.0E-06 AAAAGCAAAATCACTTGATTTTCC 24 V_NFAT_Q6_M00302 TRANSFAC + 24929541 24929552 4.0E-06 AAAAGGAAAATC 12 V_NKX61_01_M00424 TRANSFAC - 24929527 24929539 2.0E-06 CTTTTAATTACTT 13 V_SP4_03_M02810 TRANSFAC - 24932275 24932291 2.0E-06 TTCCCCGCCCCCTACCC 17 V_KROX_Q6_M00982 TRANSFAC - 24932275 24932288 3.0E-06 CCCGCCCCCTACCC 14 V_ZBP89_Q4_M01816 TRANSFAC + 24929669 24929678 2.0E-06 TCCTCCCCCA 10 V_HOXB9_01_M01426 TRANSFAC + 24929526 24929541 9.0E-06 TAAGTAATTAAAAGAA 16 V_SP1_Q6_M00196 TRANSFAC - 24929817 24929829 4.0E-06 CAGGGGCGGGGCT 13 V_HOXA1_01_M01487 TRANSFAC + 24929524 24929539 7.0E-06 CTTAAGTAATTAAAAG 16 V_MAZ_Q6_01_M02023 TRANSFAC - 24929782 24929795 1.0E-06 TGGGGAGGGGAGTG 14 V_IRF_Q6_M00772 TRANSFAC - 24929540 24929554 2.0E-06 TTGATTTTCCTTTTT 15 V_CDX1_01_M01373 TRANSFAC + 24929525 24929540 2.0E-06 TTAAGTAATTAAAAGA 16 V_IRF3_06_M02871 TRANSFAC + 24930488 24930501 1.0E-06 TGAGAAAGGTCTAA 14 V_OCT1_04_M00138 TRANSFAC + 24929536 24929558 7.0E-06 AAAGAAAAAGGAAAATCAAGTGA 23 V_OCT1_08_M01354 TRANSFAC - 24929526 24929541 5.0E-06 TTCTTTTAATTACTTA 16 V_PIT1_01_M01465 TRANSFAC - 24929522 24929538 3.0E-06 TTTTAATTACTTAAGTT 17 V_PIT1_01_M01465 TRANSFAC + 24929523 24929539 4.0E-06 ACTTAAGTAATTAAAAG 17 V_PEBP_Q6_M00984 TRANSFAC - 24930556 24930570 1.0E-06 GCTAACCACAGGCAT 15 V_NCX_02_M01420 TRANSFAC + 24929526 24929542 0.0E+00 TAAGTAATTAAAAGAAA 17 V_NCX_02_M01420 TRANSFAC - 24929527 24929543 4.0E-06 TTTTCTTTTAATTACTT 17 V_STAT4_Q5_M02117 TRANSFAC + 24929533 24929542 2.0E-06 TTAAAAGAAA 10 V_ARID3A_04_M02735 TRANSFAC + 24929525 24929541 9.0E-06 TTAAGTAATTAAAAGAA 17 V_LHX3b_01_M01971 TRANSFAC + 24929527 24929536 2.0E-06 AAGTAATTAA 10 V_NKX63_01_M01470 TRANSFAC - 24929525 24929541 4.0E-06 TTCTTTTAATTACTTAA 17 V_ISGF4G_04_M02875 TRANSFAC - 24929578 24929591 2.0E-06 GAAAAACATTAGCA 14 V_NKX23_01_M01457 TRANSFAC + 24929523 24929538 5.0E-06 ACTTAAGTAATTAAAA 16 V_NKX23_01_M01457 TRANSFAC - 24929523 24929538 2.0E-06 TTTTAATTACTTAAGT 16 V_KAISO_01_M01119 TRANSFAC + 24929574 24929583 1.0E-06 TTCCTGCTAA 10 V_NEUROD_02_M01288 TRANSFAC + 24930598 24930609 7.0E-06 TTCCTGCTGGCT 12 V_SP4_Q5_M01273 TRANSFAC + 24929818 24929828 8.0E-06 GCCCCGCCCCT 11 V_SP4_Q5_M01273 TRANSFAC - 24932280 24932290 9.0E-06 TCCCCGCCCCC 11 V_HOXB7_01_M01396 TRANSFAC - 24929524 24929539 4.0E-06 CTTTTAATTACTTAAG 16 V_GFI1_Q6_M01067 TRANSFAC - 24929551 24929563 2.0E-06 CAAAATCACTTGA 13 V_BRN4_01_M01473 TRANSFAC - 24929522 24929538 1.0E-06 TTTTAATTACTTAAGTT 17 V_BRN4_01_M01473 TRANSFAC + 24929523 24929539 3.0E-06 ACTTAAGTAATTAAAAG 17 V_HOXB8_01_M01451 TRANSFAC + 24929525 24929540 3.0E-06 TTAAGTAATTAAAAGA 16 V_IPF1_05_M01255 TRANSFAC + 24929528 24929539 5.0E-06 AGTAATTAAAAG 12 V_NKX3A_02_M01383 TRANSFAC - 24929522 24929538 2.0E-06 TTTTAATTACTTAAGTT 17 V_NKX3A_02_M01383 TRANSFAC + 24929523 24929539 5.0E-06 ACTTAAGTAATTAAAAG 17 V_EBNA1_01_M01745 TRANSFAC - 24930451 24930466 8.0E-06 AATAGAAGATGCTTCC 16 V_MSX1_02_M01412 TRANSFAC - 24929526 24929541 2.0E-06 TTCTTTTAATTACTTA 16 V_LMX1B_01_M01363 TRANSFAC - 24929525 24929541 8.0E-06 TTCTTTTAATTACTTAA 17 V_FPM315_01_M01587 TRANSFAC - 24929666 24929677 0.0E+00 GGGGGAGGAGGA 12 V_PADS_C_M00211 TRANSFAC - 24932642 24932650 8.0E-06 AGTGGTCTC 9 V_REST_02_M02256 TRANSFAC + 24932409 24932429 6.0E-06 TTCAGAACCTAGGAAATTGCC 21 V_ZFP281_01_M01597 TRANSFAC - 24929668 24929678 9.0E-06 TGGGGGAGGAG 11 V_SRF_06_M02916 TRANSFAC + 24929532 24929548 1.0E-06 ATTAAAAGAAAAAGGAA 17 V_VAX1_01_M01397 TRANSFAC - 24929524 24929539 3.0E-06 CTTTTAATTACTTAAG 16 V_HOXD8_01_M01432 TRANSFAC + 24929526 24929542 0.0E+00 TAAGTAATTAAAAGAAA 17 V_EKLF_Q5_M01874 TRANSFAC - 24929850 24929859 9.0E-06 CCCCACCCTG 10 V_MOX1_01_M01443 TRANSFAC - 24929524 24929539 7.0E-06 CTTTTAATTACTTAAG 16 V_HOXA7_03_M01394 TRANSFAC + 24929526 24929541 2.0E-06 TAAGTAATTAAAAGAA 16 V_HOXD3_01_M01338 TRANSFAC + 24929524 24929539 5.0E-06 CTTAAGTAATTAAAAG 16 V_SP1_Q2_01_M00933 TRANSFAC + 24929819 24929828 7.0E-06 CCCCGCCCCT 10 V_SP1_Q2_01_M00933 TRANSFAC - 24932280 24932289 4.0E-06 CCCCGCCCCC 10 V_NFE2L2_01_M02263 TRANSFAC + 24929765 24929775 2.0E-06 ATGATTCAGCA 11 V_LHX5_01_M01353 TRANSFAC + 24929525 24929541 6.0E-06 TTAAGTAATTAAAAGAA 17 V_HOXA10_01_M01464 TRANSFAC + 24929526 24929541 0.0E+00 TAAGTAATTAAAAGAA 16 V_HMX3_02_M01413 TRANSFAC + 24929525 24929541 8.0E-06 TTAAGTAATTAAAAGAA 17 V_DLX1_01_M01439 TRANSFAC + 24929524 24929537 4.0E-06 CTTAAGTAATTAAA 14 V_SP1_Q4_01_M00932 TRANSFAC - 24929817 24929829 5.0E-06 CAGGGGCGGGGCT 13 V_ATATA_B_M00311 TRANSFAC - 24929523 24929532 9.0E-06 TTACTTAAGT 10 V_SEF1_C_M00214 TRANSFAC + 24930549 24930567 3.0E-06 CAGCCACATGCCTGTGGTT 19 V_NF1_Q6_M00193 TRANSFAC - 24929748 24929765 1.0E-05 TTTTGGCCAGAAGCTCTT 18 V_NANOG_02_M01247 TRANSFAC + 24929532 24929551 3.0E-06 ATTAAAAGAAAAAGGAAAAT 20 V_HOXC9_01_M01416 TRANSFAC + 24929525 24929540 5.0E-06 TTAAGTAATTAAAAGA 16 V_OCT4_01_M01125 TRANSFAC - 24929559 24929573 5.0E-06 TTTTCAAAAGCAAAA 15 V_HOXC8_01_M01321 TRANSFAC + 24929524 24929539 3.0E-06 CTTAAGTAATTAAAAG 16 V_IPF1_06_M01438 TRANSFAC + 24929526 24929541 7.0E-06 TAAGTAATTAAAAGAA 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.