Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

PIGY Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 84992 phosphatidylinositol glycan anchor biosynthesis, class Y chr4 - 89444452 - 89449952 89444952 Transcription Factor Binding Sites   Download all TFBS in the PIGY promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR + 89447559 89447577 0.0E+00 TTTCCACTAGATGGCATCA 19 NF-kappaB_MA0061.1 JASPAR + 89449486 89449495 3.0E-06 GGGACTTTCC 10 Rxrb_nuclearreceptor_DBD_dimeric_14_1 SELEX - 89449512 89449525 8.0E-06 TAGGTGAAAGGTTG 14 IRF7_IRF_DBD_dimeric_14_1 SELEX + 89449152 89449165 9.0E-06 CCAAAAGTGAAAGG 14 SPIC_ETS_full_monomeric_14_1 SELEX + 89444059 89444072 8.0E-06 AAAAACCGGAAGGC 14 BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 89444116 89444132 1.0E-06 ACATTAGAAATCATTTA 17 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 89444941 89444951 1.0E-05 GCCCCGCCCCC 11 FOXF2_MA0030.1 JASPAR - 89448969 89448982 4.0E-06 CGTTCGTAAACAAA 14 POU5F1P1_POU_DBD_monomeric_9_1 SELEX + 89449170 89449178 8.0E-06 TATGCAAAA 9 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX + 89445026 89445037 0.0E+00 GCTTTTCCCACG 12 SRY_HMG_DBD_dimeric_16_1 SELEX + 89447670 89447685 6.0E-06 GACAACACTTATTTTT 16 POU2F3_POU_DBD_monomeric_9_1 SELEX + 89449170 89449178 8.0E-06 TATGCAAAA 9 FOXO1_forkhead_DBD_monomeric_8_1 SELEX - 89448970 89448977 7.0E-06 GTAAACAA 8 GMEB2_SAND_DBD_dimer-of-dimers_14_1 SELEX - 89445224 89445237 8.0E-06 GAGGTAACCACGTA 14 Pou2f2_POU_DBD_monomeric_9_1 SELEX + 89449170 89449178 7.0E-06 TATGCAAAA 9 FOXD2_forkhead_DBD_dimeric_14_1 SELEX + 89447589 89447602 1.0E-06 AACTAACATTTATC 14 Pax4_MA0068.1 JASPAR - 89447663 89447692 3.0E-06 AAAAATAAAAAATAAGTGTTGTCAAACTAA 30 Pax4_MA0068.1 JASPAR - 89449551 89449580 8.0E-06 AAAAATGTCCAAGTATTACTGTTACCACCT 30 Barhl1_homeodomain_DBD_monomeric_10_1 SELEX - 89444136 89444145 7.0E-06 CTTAAACGGT 10 E2F7_E2F_DBD_dimeric_14_1 SELEX + 89449190 89449203 5.0E-06 GTTTCACGCCAATT 14 TFAP2B_TFAP_DBD_dimeric_12_1 SELEX + 89445062 89445073 2.0E-06 AGCCCCAGGGCA 12 IRF1_MA0050.1 JASPAR - 89447640 89447651 2.0E-06 CAAAATGAAAGT 12 IRF1_MA0050.1 JASPAR + 89449154 89449165 5.0E-06 AAAAGTGAAAGG 12 RFX2_RFX_DBD_dimeric_15_1 SELEX + 89449164 89449178 0.0E+00 GGTTGCTATGCAAAA 15 FOXD3_forkhead_DBD_dimeric_14_1 SELEX + 89447589 89447602 3.0E-06 AACTAACATTTATC 14 RELA_MA0107.1 JASPAR + 89449486 89449495 6.0E-06 GGGACTTTCC 10 SP1_MA0079.2 JASPAR + 89444942 89444951 7.0E-06 CCCCGCCCCC 10 NFAT5_NFAT_DBD_dimeric_14_1 SELEX - 89449484 89449497 5.0E-06 ATGGAAAGTCCCTA 14 NFIX_NFI_full_monomeric_9_2 SELEX + 89447648 89447656 8.0E-06 TTTGCCAAT 9 BARHL2_homeodomain_full_monomeric_10_1 SELEX - 89444136 89444145 9.0E-06 CTTAAACGGT 10 RARA_nuclearreceptor_full_dimeric_17_1 SELEX - 89449319 89449335 8.0E-06 AGGGCAGTTGCAGGTCA 17 RFX3_RFX_DBD_dimeric_15_1 SELEX + 89449164 89449178 1.0E-06 GGTTGCTATGCAAAA 15 SP4_C2H2_full_monomeric_17_1 SELEX + 89444938 89444954 2.0E-06 CAGGCCCCGCCCCCTGG 17 NFATC1_NFAT_full_dimeric_20_1 SELEX - 89447547 89447566 1.0E-06 AGTGGAAAATTTATTTTGAC 20 CTCF_C2H2_full_monomeric_17_1 SELEX - 89447560 89447576 1.0E-06 GATGCCATCTAGTGGAA 17 SOX15_HMG_full_dimeric_15_1 SELEX + 89445114 89445128 1.0E-05 AACTAAACCAGTGTT 15 NR2C2_nuclearreceptor_DBD_dimeric_14_1 SELEX - 89449512 89449525 9.0E-06 TAGGTGAAAGGTTG 14 PRDM4_C2H2_full_monomeric_13_1 SELEX - 89447506 89447518 0.0E+00 TTTCAATGCCCCC 13 Foxd3_MA0041.1 JASPAR - 89447588 89447599 9.0E-06 AAATGTTAGTTC 12 LHX9_homeodomain_DBD_dimeric_13_1 SELEX + 89445758 89445770 7.0E-06 TAACTGCTCATTT 13 ELK1_MA0028.1 JASPAR + 89444061 89444070 5.0E-06 AAACCGGAAG 10 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 89447638 89447652 9.0E-06 GCAAAATGAAAGTAA 15 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 89449153 89449167 1.0E-06 CAAAAGTGAAAGGTT 15 Evi1_MA0029.1 JASPAR - 89447607 89447620 7.0E-06 AAGAAAAGATCAAG 14 FEV_MA0156.1 JASPAR - 89449201 89449208 1.0E-05 CAGGAAAT 8 TFAP2C_TFAP_full_dimeric_12_1 SELEX + 89445062 89445073 1.0E-06 AGCCCCAGGGCA 12 SPDEF_ETS_full_putative-multimer_16_1 SELEX - 89448931 89448946 7.0E-06 TCAGCAAGGAGGATAA 16 TBX21_TBX_full_dimeric_19_1 SELEX - 89449303 89449321 2.0E-06 TCACACCCCCAGGGCCTGA 19 SOX18_HMG_full_dimeric_15_3 SELEX + 89447633 89447647 6.0E-06 AAGACTTACTTTCAT 15 RORA_nuclearreceptor_DBD_dimeric_20_1 SELEX - 89449319 89449338 2.0E-06 CACAGGGCAGTTGCAGGTCA 20 SPI1_ETS_full_monomeric_14_1 SELEX + 89444059 89444072 8.0E-06 AAAAACCGGAAGGC 14 FOXO3_forkhead_full_monomeric_8_1 SELEX - 89448970 89448977 7.0E-06 GTAAACAA 8 TFAP2A_TFAP_DBD_dimeric_12_1 SELEX + 89445062 89445073 8.0E-06 AGCCCCAGGGCA 12 Sox3_HMG_DBD_dimeric_17_1 SELEX + 89445113 89445129 7.0E-06 AAACTAAACCAGTGTTT 17 HMBOX1_homeodomain_DBD_monomeric_10_1 SELEX + 89443901 89443910 4.0E-06 ACTAGTTAAA 10 Tcfap2a_TFAP_DBD_dimeric_12_1 SELEX + 89445062 89445073 9.0E-06 AGCCCCAGGGCA 12 Tcfap2a_TFAP_DBD_dimeric_12_1 SELEX - 89445062 89445073 9.0E-06 TGCCCTGGGGCT 12 IRF2_MA0051.1 JASPAR - 89447635 89447652 3.0E-06 GCAAAATGAAAGTAAGTC 18 IRF2_MA0051.1 JASPAR + 89449153 89449170 1.0E-06 CAAAAGTGAAAGGTTGCT 18 Zfx_MA0146.1 JASPAR - 89444938 89444951 8.0E-06 GGGGGCGGGGCCTG 14 V_NFAT_Q4_01_M00935 TRANSFAC - 89447556 89447565 0.0E+00 GTGGAAAATT 10 V_NFKAPPAB65_01_M00052 TRANSFAC + 89449486 89449495 7.0E-06 GGGACTTTCC 10 V_NFKB_C_M00208 TRANSFAC + 89449485 89449496 0.0E+00 AGGGACTTTCCA 12 V_NFKB_Q6_01_M00774 TRANSFAC - 89449485 89449500 1.0E-06 GAGATGGAAAGTCCCT 16 V_CDX2_Q5_01_M01659 TRANSFAC + 89445500 89445510 3.0E-06 TCTATAAATGA 11 V_EVI1_05_M00082 TRANSFAC - 89444047 89444057 9.0E-06 AGCCAAGATAA 11 V_XFD1_01_M00267 TRANSFAC - 89448967 89448980 4.0E-06 TTCGTAAACAAAGT 14 V_CEBP_Q3_M00770 TRANSFAC + 89445741 89445752 7.0E-06 GACTTTGGCAAA 12 V_ZFX_01_M01593 TRANSFAC + 89444867 89444882 1.0E-06 GACCAGGCCTCACCGC 16 V_ZFX_01_M01593 TRANSFAC + 89444935 89444950 2.0E-06 GGGCAGGCCCCGCCCC 16 V_EVI1_04_M00081 TRANSFAC + 89444253 89444267 8.0E-06 TAAAAGGAAAAAAAA 15 V_FOXD3_01_M00130 TRANSFAC - 89447588 89447599 6.0E-06 AAATGTTAGTTC 12 V_FOXO4_02_M00476 TRANSFAC + 89448967 89448980 1.0E-06 ACTTTGTTTACGAA 14 V_FOXJ2_02_M00423 TRANSFAC + 89444031 89444044 0.0E+00 ACAACAATACTTTT 14 V_SP1_Q6_01_M00931 TRANSFAC - 89444941 89444950 4.0E-06 GGGGCGGGGC 10 V_ZTA_Q2_M00711 TRANSFAC - 89447544 89447556 3.0E-06 TTATTTTGACTCA 13 V_EGR_Q6_M00807 TRANSFAC + 89444164 89444174 3.0E-06 GTGGGGGCGGC 11 V_IRF_Q6_01_M00972 TRANSFAC + 89449154 89449164 0.0E+00 AAAAGTGAAAG 11 V_IRF2_Q6_M01882 TRANSFAC - 89447638 89447653 0.0E+00 GGCAAAATGAAAGTAA 16 V_IRF2_Q6_M01882 TRANSFAC + 89449152 89449167 6.0E-06 CCAAAAGTGAAAGGTT 16 V_NFAT3_Q3_M01734 TRANSFAC + 89447555 89447564 7.0E-06 AAATTTTCCA 10 V_FOXO3A_Q1_M01137 TRANSFAC + 89447548 89447559 6.0E-06 TCAAAATAAATT 12 V_RFX4_03_M02789 TRANSFAC - 89449162 89449176 1.0E-06 TTGCATAGCAACCTT 15 V_FOXJ1_03_M02750 TRANSFAC - 89448965 89448980 5.0E-06 TTCGTAAACAAAGTGC 16 V_SP1_03_M02281 TRANSFAC + 89444942 89444951 7.0E-06 CCCCGCCCCC 10 V_NFY_Q6_01_M00775 TRANSFAC - 89449112 89449124 3.0E-06 GCTGGACCAATCA 13 V_NFAT2_01_M01748 TRANSFAC - 89447557 89447565 8.0E-06 GTGGAAAAT 9 V_TCFAP2E_04_M02926 TRANSFAC + 89444254 89444267 0.0E+00 AAAAGGAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 89445308 89445321 6.0E-06 TACATGAAACAAAT 14 V_CDX_Q5_M00991 TRANSFAC - 89444099 89444116 4.0E-06 TACCACCAGGTTTATGAA 18 V_NKX62_Q2_M00489 TRANSFAC + 89447550 89447561 7.0E-06 AAAATAAATTTT 12 V_CETS1P54_02_M00074 TRANSFAC - 89449199 89449211 1.0E-06 ATACAGGAAATTG 13 V_TAL1_GATA1_01_M02243 TRANSFAC + 89444140 89444157 5.0E-06 TTTAAGAACACAGATAAG 18 V_ELF4_04_M02850 TRANSFAC + 89447546 89447562 3.0E-06 AGTCAAAATAAATTTTC 17 V_HMBOX1_01_M01456 TRANSFAC + 89443897 89443913 0.0E+00 AAAAACTAGTTAAAGAG 17 V_BACH1_01_M00495 TRANSFAC + 89447540 89447554 8.0E-06 GAAATGAGTCAAAAT 15 V_GC_01_M00255 TRANSFAC - 89444939 89444952 0.0E+00 AGGGGGCGGGGCCT 14 V_SOX7_03_M02807 TRANSFAC - 89447646 89447667 1.0E-06 ACTAAGAAACAATTGGCAAAAT 22 V_HELIOSA_02_M01004 TRANSFAC + 89444254 89444264 0.0E+00 AAAAGGAAAAA 11 V_NFAT_Q6_M00302 TRANSFAC + 89444254 89444265 3.0E-06 AAAAGGAAAAAA 12 V_NFAT_Q6_M00302 TRANSFAC - 89447556 89447567 1.0E-06 TAGTGGAAAATT 12 V_XFD3_01_M00269 TRANSFAC + 89447544 89447557 8.0E-06 TGAGTCAAAATAAA 14 V_ZBED6_01_M01598 TRANSFAC - 89444820 89444831 0.0E+00 CAGGCTCGCCTC 12 V_IRF2_01_M00063 TRANSFAC + 89449153 89449165 0.0E+00 CAAAAGTGAAAGG 13 V_IRF2_01_M00063 TRANSFAC + 89449174 89449186 1.0E-05 CAAAAGCGAGACT 13 V_SP4_03_M02810 TRANSFAC + 89444940 89444956 3.0E-06 GGCCCCGCCCCCTGGTC 17 V_KROX_Q6_M00982 TRANSFAC - 89444161 89444174 5.0E-06 GCCGCCCCCACGCC 14 V_AP1_Q6_01_M00925 TRANSFAC + 89445752 89445760 9.0E-06 ATGACTTAA 9 V_NFKB_Q6_M00194 TRANSFAC + 89449484 89449497 1.0E-06 TAGGGACTTTCCAT 14 V_TBX5_02_M01020 TRANSFAC + 89449472 89449481 3.0E-06 TAAGGTGTTG 10 V_SP1_Q6_M00196 TRANSFAC - 89444940 89444952 0.0E+00 AGGGGGCGGGGCC 13 V_OCT1_05_M00161 TRANSFAC + 89444037 89444050 4.0E-06 ATACTTTTCATTAT 14 V_IRC900814_04_M02870 TRANSFAC + 89447512 89447527 5.0E-06 ATTGAAATTTGTGAAC 16 V_IRF_Q6_M00772 TRANSFAC + 89447637 89447651 3.0E-06 CTTACTTTCATTTTG 15 V_IRF_Q6_M00772 TRANSFAC - 89449154 89449168 5.0E-06 CAACCTTTCACTTTT 15 V_RFXDC2_03_M02790 TRANSFAC - 89449162 89449176 2.0E-06 TTGCATAGCAACCTT 15 V_OCT1_04_M00138 TRANSFAC - 89447577 89447599 5.0E-06 AAATGTTAGTTCAAATACTAAAT 23 Tal1_Gata1_MA0140.1 JASPAR + 89444140 89444157 5.0E-06 TTTAAGAACACAGATAAG 18 V_TAL1BETAE47_01_M00065 TRANSFAC - 89449221 89449236 9.0E-06 ATACACAGATGGTGAT 16 V_GR_Q6_M00192 TRANSFAC - 89444142 89444160 9.0E-06 CAGCTTATCTGTGTTCTTA 19 V_SOX12_04_M02900 TRANSFAC - 89447614 89447629 3.0E-06 AATCACAGAAAGAAAA 16 V_MEF2_04_M00233 TRANSFAC + 89447540 89447561 9.0E-06 GAAATGAGTCAAAATAAATTTT 22 V_ISGF3G_03_M02771 TRANSFAC - 89447638 89447652 9.0E-06 GCAAAATGAAAGTAA 15 V_TBP_06_M02814 TRANSFAC + 89445423 89445438 0.0E+00 CCAAAATATATAAATT 16 V_TBP_06_M02814 TRANSFAC - 89445423 89445438 7.0E-06 AATTTATATATTTTGG 16 V_TBP_06_M02814 TRANSFAC - 89445425 89445440 2.0E-06 AGAATTTATATATTTT 16 V_CTCF_02_M01259 TRANSFAC + 89447556 89447575 0.0E+00 AATTTTCCACTAGATGGCAT 20 V_CTCF_01_M01200 TRANSFAC + 89447558 89447577 6.0E-06 TTTTCCACTAGATGGCATCA 20 V_OCT1_B_M00342 TRANSFAC + 89449170 89449179 8.0E-06 TATGCAAAAG 10 V_ICSBP_Q6_M00699 TRANSFAC - 89447639 89447650 1.0E-06 AAAATGAAAGTA 12 V_CETS1P54_03_M01078 TRANSFAC - 89449197 89449212 4.0E-06 TATACAGGAAATTGGC 16 V_IRF7_01_M00453 TRANSFAC - 89447637 89447654 4.0E-06 TGGCAAAATGAAAGTAAG 18 V_SP4_Q5_M01273 TRANSFAC + 89444941 89444951 1.0E-06 GCCCCGCCCCC 11 V_SOX15_03_M02799 TRANSFAC - 89447649 89447665 3.0E-06 TAAGAAACAATTGGCAA 17 V_TBP_01_M00471 TRANSFAC + 89445431 89445438 8.0E-06 TATAAATT 8 V_EOMES_04_M02851 TRANSFAC + 89449470 89449485 7.0E-06 AATAAGGTGTTGGCTA 16 V_TAL1ALPHAE47_01_M00066 TRANSFAC - 89449221 89449236 9.0E-06 ATACACAGATGGTGAT 16 V_OCT1_Q6_M00195 TRANSFAC + 89445426 89445440 9.0E-06 AAATATATAAATTCT 15 V_HDX_01_M01333 TRANSFAC + 89444117 89444133 0.0E+00 CATTAGAAATCATTTAG 17 V_RBPJK_01_M01112 TRANSFAC - 89445029 89445039 6.0E-06 CCCGTGGGAAA 11 V_HNF1B_01_M01425 TRANSFAC - 89443898 89443914 8.0E-06 CCTCTTTAACTAGTTTT 17 V_FOXO3_01_M00477 TRANSFAC + 89448967 89448980 1.0E-06 ACTTTGTTTACGAA 14 V_PITX2_Q2_M00482 TRANSFAC - 89447622 89447632 8.0E-06 TGTAATCACAG 11 V_OCT1_06_M00162 TRANSFAC + 89447637 89447650 9.0E-06 CTTACTTTCATTTT 14 V_SOX21_04_M02907 TRANSFAC + 89447650 89447666 6.0E-06 TGCCAATTGTTTCTTAG 17 V_IRF1_Q6_01_M01881 TRANSFAC + 89447639 89447652 2.0E-06 TACTTTCATTTTGC 14 V_IRF1_Q6_01_M01881 TRANSFAC - 89449153 89449166 2.0E-06 ACCTTTCACTTTTG 14 V_SOX8_03_M02808 TRANSFAC + 89445261 89445277 4.0E-06 TTATGTATTGTACCGAA 17 V_NFKAPPAB_01_M00054 TRANSFAC + 89449486 89449495 3.0E-06 GGGACTTTCC 10 V_SRF_06_M02916 TRANSFAC + 89444251 89444267 9.0E-06 CTTAAAAGGAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 89444254 89444270 1.0E-05 AAAAGGAAAAAAAAAAA 17 V_FOXO1_04_M01969 TRANSFAC - 89445132 89445151 8.0E-06 GAAAACCCAGACACCTTGAC 20 V_FOXO1_01_M00473 TRANSFAC - 89448969 89448978 5.0E-06 CGTAAACAAA 10 V_IRF1_01_M00062 TRANSFAC + 89449153 89449165 1.0E-06 CAAAAGTGAAAGG 13 V_RFX3_04_M02788 TRANSFAC - 89449158 89449180 4.0E-06 GCTTTTGCATAGCAACCTTTCAC 23 V_SRY_05_M02917 TRANSFAC - 89447650 89447666 3.0E-06 CTAAGAAACAATTGGCA 17 V_SP1_Q2_01_M00933 TRANSFAC + 89444942 89444951 4.0E-06 CCCCGCCCCC 10 V_SP1_Q4_01_M00932 TRANSFAC - 89444940 89444952 0.0E+00 AGGGGGCGGGGCC 13 V_BARX1_01_M01340 TRANSFAC - 89447647 89447662 6.0E-06 GAAACAATTGGCAAAA 16 V_GFI1_Q6_01_M02010 TRANSFAC + 89447622 89447631 8.0E-06 CTGTGATTAC 10 V_SOX5_04_M02910 TRANSFAC + 89447570 89447584 6.0E-06 TGGCATCATTTAGTA 15 V_FEV_01_M02269 TRANSFAC - 89449201 89449208 1.0E-05 CAGGAAAT 8 V_DEC_Q1_M00997 TRANSFAC + 89445235 89445247 1.0E-06 CTCCAAGTGAAGT 13 V_FOXK1_03_M02752 TRANSFAC - 89448966 89448982 3.0E-06 CGTTCGTAAACAAAGTG 17 V_PAX4_04_M00380 TRANSFAC + 89445425 89445454 1.0E-05 AAAATATATAAATTCTTCCTGCCTGAGACC 30 V_NANOG_02_M01247 TRANSFAC + 89444252 89444271 8.0E-06 TTAAAAGGAAAAAAAAAAAG 20 V_PPARG_01_M00512 TRANSFAC - 89449508 89449528 2.0E-06 CAGTAGGTGAAAGGTTGTCTT 21

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.