Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ARHGAP19 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 84986 Rho GTPase activating protein 19 chr10 - 99051930 - 99057430 99052430 Transcription Factor Binding Sites   Download all TFBS in the ARHGAP19 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 99051804 99051821 8.0E-06 AGTGTCAAGATTGAATAA 18 POU3F3_POU_DBD_monomeric_12_1 SELEX + 99052511 99052522 8.0E-06 TTTAATATATTA 12 ESR2_MA0258.1 JASPAR + 99051672 99051689 2.0E-06 TAAAGTCATGATGTCCTG 18 POU5F1P1_POU_DBD_monomeric_9_1 SELEX + 99052529 99052537 6.0E-06 TATTCAAAT 9 POU5F1P1_POU_DBD_monomeric_9_1 SELEX + 99052716 99052724 3.0E-06 TATGTAAAT 9 SOX9_HMG_full_dimeric_17_3 SELEX + 99052535 99052551 9.0E-06 AATGACTAACCGTCATT 17 SOX9_HMG_full_dimeric_17_3 SELEX - 99052535 99052551 2.0E-06 AATGACGGTTAGTCATT 17 POU2F3_POU_DBD_monomeric_9_1 SELEX + 99052529 99052537 6.0E-06 TATTCAAAT 9 POU2F3_POU_DBD_monomeric_9_1 SELEX + 99052716 99052724 4.0E-06 TATGTAAAT 9 POU1F1_POU_DBD_monomeric_14_1 SELEX + 99052714 99052727 1.0E-06 GATATGTAAATCAG 14 SOX15_HMG_full_dimeric_15_3 SELEX + 99052536 99052550 4.0E-06 ATGACTAACCGTCAT 15 POU2F2_POU_DBD_monomeric_11_1 SELEX + 99052715 99052725 3.0E-06 ATATGTAAATC 11 POU3F4_POU_DBD_monomeric_9_1 SELEX + 99052716 99052724 4.0E-06 TATGTAAAT 9 IRF7_IRF_DBD_trimeric_17_1 SELEX + 99051735 99051751 3.0E-06 AAGAAGAAAATCTATTG 17 Pou2f2_POU_DBD_monomeric_9_1 SELEX + 99052529 99052537 4.0E-06 TATTCAAAT 9 Pou2f2_POU_DBD_monomeric_9_1 SELEX + 99052716 99052724 5.0E-06 TATGTAAAT 9 Barhl1_homeodomain_DBD_monomeric_10_1 SELEX - 99052507 99052516 1.0E-06 ATTAAACGGT 10 POU3F3_POU_DBD_monomeric_13_1 SELEX + 99052714 99052726 7.0E-06 GATATGTAAATCA 13 Sox17_HMG_DBD_dimeric_15_2 SELEX + 99052536 99052550 8.0E-06 ATGACTAACCGTCAT 15 SOX2_HMG_full_dimeric_15_1 SELEX + 99052536 99052550 3.0E-06 ATGACTAACCGTCAT 15 ESR1_MA0112.2 JASPAR - 99051674 99051693 2.0E-06 AGTCCAGGACATCATGACTT 20 BARHL2_homeodomain_full_monomeric_10_1 SELEX - 99052507 99052516 1.0E-06 ATTAAACGGT 10 SOX14_HMG_DBD_dimeric_15_1 SELEX + 99052536 99052550 8.0E-06 ATGACTAACCGTCAT 15 NRL_bZIP_DBD_monomeric_11_1 SELEX - 99052389 99052399 8.0E-06 AGTTTGCTGAC 11 HESX1_homeodomain_DBD_dimeric_15_1 SELEX + 99051911 99051925 3.0E-06 CTAATTGACACTCAA 15 POU3F1_POU_DBD_monomeric_12_1 SELEX + 99052715 99052726 1.0E-06 ATATGTAAATCA 12 MTF1_C2H2_DBD_monomeric_14_1 SELEX - 99051974 99051987 8.0E-06 GTTGCACACAGCGC 14 POU2F1_POU_DBD_monomeric_12_1 SELEX + 99052714 99052725 5.0E-06 GATATGTAAATC 12 SOX18_HMG_full_dimeric_15_3 SELEX + 99052536 99052550 5.0E-06 ATGACTAACCGTCAT 15 MAFK_bZIP_full_monomeric_12_1 SELEX - 99052389 99052400 7.0E-06 AAGTTTGCTGAC 12 ETV6_ETS_full_dimeric_15_1 SELEX - 99052014 99052028 1.0E-06 GAGGAAACGGAAGTC 15 POU3F2_POU_DBD_monomeric_12_1 SELEX + 99052715 99052726 1.0E-06 ATATGTAAATCA 12 V_FOXP1_01_M00987 TRANSFAC + 99052434 99052453 0.0E+00 ATATTTGGATTGGCTAATAT 20 V_TGIF_01_M00418 TRANSFAC + 99051757 99051767 3.0E-06 AGTTGTCATTA 11 V_DBX1_01_M01483 TRANSFAC + 99052513 99052529 1.0E-05 TAATATATTATTGGTCT 17 V_E2F4_04_M02847 TRANSFAC + 99052042 99052058 3.0E-06 GTCTCGGCGCCAAAGCG 17 V_AR_02_M00953 TRANSFAC - 99051649 99051675 1.0E-05 TTTATTTCCACAGGATGTTCTTTCCTA 27 V_ZFP410_04_M02936 TRANSFAC + 99052402 99052418 3.0E-06 TTTCACCGCCCCACCTT 17 V_ZFP410_04_M02936 TRANSFAC - 99052579 99052595 7.0E-06 CTTCCCCGCCCCTCCCT 17 V_NF1_Q6_01_M00806 TRANSFAC - 99052143 99052159 9.0E-06 CTGGACTCCAGCCAAAC 17 V_ESR1_01_M02261 TRANSFAC - 99051674 99051693 2.0E-06 AGTCCAGGACATCATGACTT 20 V_ZFX_01_M01593 TRANSFAC - 99052604 99052619 1.0E-06 CGGCAGGCCTCGGGGC 16 V_MTF1_Q4_M00650 TRANSFAC - 99051974 99051987 1.0E-05 GTTGCACACAGCGC 14 V_MAFB_05_M02775 TRANSFAC - 99052384 99052400 0.0E+00 AAGTTTGCTGACGAAGA 17 V_OCT1_Q5_01_M00930 TRANSFAC - 99052716 99052726 1.0E-06 TGATTTACATA 11 V_ZTA_Q2_M00711 TRANSFAC - 99051980 99051992 2.0E-06 TCACTGTTGCACA 13 V_EGR_Q6_M00807 TRANSFAC - 99052423 99052433 6.0E-06 GTGGGGGCGGG 11 V_POU2F3_01_M01476 TRANSFAC + 99052526 99052541 9.0E-06 GTCTATTCAAATGACT 16 V_POU2F3_01_M01476 TRANSFAC + 99052713 99052728 5.0E-06 TGATATGTAAATCAGG 16 V_FOXO3A_Q1_M01137 TRANSFAC - 99052449 99052460 5.0E-06 TGAAAACATATT 12 V_HNF3_Q6_01_M01012 TRANSFAC + 99052516 99052533 6.0E-06 TATATTATTGGTCTATTC 18 V_STAT6_01_M00494 TRANSFAC - 99051666 99051673 7.0E-06 TATTTCCA 8 V_STAT6_01_M00494 TRANSFAC - 99051822 99051829 7.0E-06 TATTTCCA 8 V_SPZ1_01_M00446 TRANSFAC + 99052135 99052149 2.0E-06 AGCGGGGGGTTTGGC 15 V_PITX2_Q6_M02114 TRANSFAC + 99050915 99050924 5.0E-06 TATAAACCCA 10 V_AREB6_04_M00415 TRANSFAC + 99051905 99051913 8.0E-06 CTGTTTCTA 9 V_CETS1P54_02_M00074 TRANSFAC - 99051656 99051668 8.0E-06 CCACAGGATGTTC 13 V_BARBIE_01_M00238 TRANSFAC - 99050766 99050780 9.0E-06 GTTTAAAGGTGGATG 15 V_HNF1_C_M00206 TRANSFAC - 99052529 99052545 8.0E-06 GGTTAGTCATTTGAATA 17 V_NFY_C_M00209 TRANSFAC + 99052438 99052451 6.0E-06 TTGGATTGGCTAAT 14 V_PR_Q2_M00960 TRANSFAC + 99051652 99051661 0.0E+00 GAAAGAACAT 10 V_HOXB13_01_M01467 TRANSFAC - 99052514 99052529 7.0E-06 AGACCAATAATATATT 16 V_EVI1_01_M00078 TRANSFAC - 99051799 99051814 1.0E-05 AGATTGAATAAGACAA 16 V_MAZ_Q6_01_M02023 TRANSFAC + 99052578 99052591 1.0E-05 GAGGGAGGGGCGGG 14 V_E2F2_04_M02846 TRANSFAC + 99052042 99052058 4.0E-06 GTCTCGGCGCCAAAGCG 17 V_ISRE_01_M00258 TRANSFAC + 99052627 99052641 1.0E-06 TAGTTTCTCATTTTG 15 V_GR_01_M00955 TRANSFAC - 99051649 99051675 5.0E-06 TTTATTTCCACAGGATGTTCTTTCCTA 27 V_DAX1_01_M01248 TRANSFAC - 99052656 99052675 9.0E-06 GAACCTAAAGGTCTGTGGAA 20 V_PNR_01_M01650 TRANSFAC + 99052675 99052688 3.0E-06 CAAGTCAGAAATCA 14 V_HB24_01_M01399 TRANSFAC - 99052511 99052525 1.0E-06 CAATAATATATTAAA 15 V_TBP_06_M02814 TRANSFAC + 99052510 99052525 1.0E-06 GTTTAATATATTATTG 16 V_OCT4_02_M01124 TRANSFAC + 99052630 99052644 7.0E-06 TTTCTCATTTTGATG 15 V_OCT_Q6_M00795 TRANSFAC - 99052716 99052726 1.0E-06 TGATTTACATA 11 V_LIM1_01_M01418 TRANSFAC - 99051906 99051922 6.0E-06 AGTGTCAATTAGAAACA 17 V_TFIII_Q6_M00706 TRANSFAC + 99052577 99052585 6.0E-06 AGAGGGAGG 9 V_FXR_IR1_Q6_M00767 TRANSFAC - 99050911 99050923 2.0E-06 GGGTTTATATCCT 13 V_OCT2_01_M01368 TRANSFAC + 99052713 99052728 4.0E-06 TGATATGTAAATCAGG 16 V_CAAT_C_M00200 TRANSFAC - 99052125 99052149 7.0E-06 GCCAAACCCCCCGCTCGGTCCTGCC 25 V_OCT1_Q6_M00195 TRANSFAC + 99052713 99052727 2.0E-06 TGATATGTAAATCAG 15 V_PARP_Q3_M01211 TRANSFAC + 99051821 99051830 2.0E-06 TTGGAAATAG 10 V_DMRT7_01_M01151 TRANSFAC - 99051900 99051913 7.0E-06 TAGAAACAGTGTTG 14 V_TBP_04_M02918 TRANSFAC - 99051783 99051797 8.0E-06 CCATTTAAAGCTAGC 15 V_ETS1_B_M00339 TRANSFAC - 99051652 99051666 6.0E-06 ACAGGATGTTCTTTC 15 V_OCT1_06_M00162 TRANSFAC - 99052714 99052727 8.0E-06 CTGATTTACATATC 14 V_SP1_Q2_01_M00933 TRANSFAC - 99052583 99052592 7.0E-06 CCCCGCCCCT 10 V_CMAF_01_M01070 TRANSFAC - 99052382 99052400 1.0E-06 AAGTTTGCTGACGAAGATG 19 V_DMRT5_01_M01150 TRANSFAC - 99051901 99051915 8.0E-06 ATTAGAAACAGTGTT 15 V_ESR2_01_M02377 TRANSFAC + 99051672 99051689 2.0E-06 TAAAGTCATGATGTCCTG 18

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.