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LSM10 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 84967 LSM10, U7 small nuclear RNA associated chr1 - 36862993 - 36868493 36863493 Transcription Factor Binding Sites   Download all TFBS in the LSM10 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SOX10_HMG_full_dimeric_14_1 SELEX + 36868311 36868324 4.0E-06 TAAATATTCAGTCT 14 POU2F1_POU_DBD_dimeric_14_1 SELEX + 36868309 36868322 3.0E-06 TTTAAATATTCAGT 14 POU2F1_POU_DBD_dimeric_14_1 SELEX - 36868309 36868322 1.0E-06 ACTGAATATTTAAA 14 SPIC_ETS_full_monomeric_14_1 SELEX + 36863262 36863275 1.0E-06 TAAATGGGGAAGAA 14 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 36866704 36866714 3.0E-06 AACACGCCCCC 11 FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 36863758 36863769 2.0E-06 TAAGAAAACAAA 12 POU3F4_POU_DBD_monomeric_11_1 SELEX - 36868310 36868320 9.0E-06 TGAATATTTAA 11 FOXC1_forkhead_DBD_monomeric_11_1 SELEX + 36863758 36863768 1.0E-05 TAAGAAAACAA 11 NFIL3_MA0025.1 JASPAR - 36868446 36868456 5.0E-06 TTATGTAAGTA 11 SOX8_HMG_DBD_dimeric_14_1 SELEX + 36868311 36868324 1.0E-06 TAAATATTCAGTCT 14 SPIB_ETS_DBD_monomeric_14_1 SELEX + 36863262 36863275 9.0E-06 TAAATGGGGAAGAA 14 Tcfcp2l1_MA0145.1 JASPAR - 36867122 36867135 7.0E-06 CCAGACTCAGCCAG 14 Pou2f2_POU_DBD_dimeric_14_1 SELEX + 36868309 36868322 4.0E-06 TTTAAATATTCAGT 14 Pou2f2_POU_DBD_dimeric_14_1 SELEX - 36868309 36868322 2.0E-06 ACTGAATATTTAAA 14 SP1_MA0079.2 JASPAR - 36866698 36866707 7.0E-06 CCCCGCCCCC 10 POU2F3_POU_DBD_dimeric_12_1 SELEX + 36868310 36868321 5.0E-06 TTAAATATTCAG 12 POU2F3_POU_DBD_dimeric_12_1 SELEX - 36868310 36868321 3.0E-06 CTGAATATTTAA 12 znf143_MA0088.1 JASPAR + 36863548 36863567 0.0E+00 CAATCCCCAGAATGCTTCGC 20 SOX9_HMG_full_dimeric_16_3 SELEX + 36863032 36863047 3.0E-06 ATGAATCTGCGATCAA 16 PBX1_MA0070.1 JASPAR + 36863041 36863052 1.0E-05 CGATCAAGCAAA 12 POU3F1_POU_DBD_monomeric_12_2 SELEX - 36868310 36868321 7.0E-06 CTGAATATTTAA 12 Hltf_MA0109.1 JASPAR - 36868451 36868460 6.0E-06 AAACTTATGT 10 POU5F1P1_POU_DBD_monomeric_12_1 SELEX + 36868310 36868321 6.0E-06 TTAAATATTCAG 12 POU5F1P1_POU_DBD_monomeric_12_1 SELEX - 36868310 36868321 4.0E-06 CTGAATATTTAA 12 SPI1_ETS_full_monomeric_14_1 SELEX + 36863262 36863275 7.0E-06 TAAATGGGGAAGAA 14 Sox2_MA0143.1 JASPAR - 36863757 36863771 5.0E-06 TCTTTGTTTTCTTAA 15 HOXC12_homeodomain_DBD_monomeric_11_1 SELEX - 36862889 36862899 8.0E-06 GGTCGTAAAGA 11 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 36863759 36863771 1.0E-06 AAGAAAACAAAGA 13 POU4F1_POU_DBD_monomeric_14_1 SELEX - 36868308 36868321 4.0E-06 CTGAATATTTAAAA 14 IRF2_MA0051.1 JASPAR - 36863374 36863391 6.0E-06 GGAAAGCGGAAGGAATGT 18 V_RUSH1A_02_M01107 TRANSFAC - 36868451 36868460 6.0E-06 AAACTTATGT 10 V_MINI20_B_M00324 TRANSFAC - 36863687 36863707 6.0E-06 TCACTGCTCCATGCCGGAGCC 21 V_FOXP1_01_M00987 TRANSFAC - 36863759 36863778 7.0E-06 TTTTTCTTCTTTGTTTTCTT 20 V_HNF3B_01_M00131 TRANSFAC - 36863758 36863772 8.0E-06 TTCTTTGTTTTCTTA 15 V_KLF15_Q2_M01714 TRANSFAC + 36866677 36866690 9.0E-06 GAGCAGGGGCGGGG 14 V_GAF_Q6_M01209 TRANSFAC - 36866922 36866932 9.0E-06 CATATTCCTGG 11 V_FOXP3_Q4_M00992 TRANSFAC + 36864988 36865004 3.0E-06 GAAGTGCTATGACAGGC 17 V_TCF3_01_M01594 TRANSFAC - 36863759 36863771 1.0E-06 TCTTTGTTTTCTT 13 V_AR_02_M00953 TRANSFAC - 36863111 36863137 7.0E-06 GGAGGTGGCAAAGCCTGTTCTAGAACC 27 V_SOX30_03_M02804 TRANSFAC - 36868423 36868438 8.0E-06 TATCAACAATGAGGTT 16 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC - 36868307 36868318 0.0E+00 AATATTTAAAAG 12 V_FOXO4_02_M00476 TRANSFAC - 36863758 36863771 8.0E-06 TCTTTGTTTTCTTA 14 V_MAFB_03_M02879 TRANSFAC - 36868356 36868370 3.0E-06 AACTTGCAATATAGT 15 V_SP1_Q6_01_M00931 TRANSFAC + 36866682 36866691 4.0E-06 GGGGCGGGGC 10 V_PLAG1_02_M01973 TRANSFAC - 36866687 36866702 5.0E-06 CCCCCCAAGATGCCCC 16 V_HNF3_Q6_01_M01012 TRANSFAC - 36863755 36863772 1.0E-06 TTCTTTGTTTTCTTAAGA 18 V_SP1_03_M02281 TRANSFAC - 36866698 36866707 7.0E-06 CCCCGCCCCC 10 V_NKX24_01_M01350 TRANSFAC - 36863710 36863725 1.0E-05 GGAGCCACTTGATCTT 16 V_SP1_02_M01303 TRANSFAC + 36866699 36866709 8.0E-06 GGGGCGGGGGC 11 V_PU1_Q4_M01172 TRANSFAC - 36863263 36863281 1.0E-06 AGCGTTTTCTTCCCCATTT 19 V_PU1_Q4_M01172 TRANSFAC - 36867153 36867171 1.0E-06 AGCATGCACTTCCTCCATT 19 V_HBP1_Q2_M01661 TRANSFAC - 36863650 36863658 3.0E-06 TTCAATGAA 9 V_HELIOSA_01_M01003 TRANSFAC + 36863777 36863787 3.0E-06 AATAGGGAAAA 11 V_OCT2_02_M01761 TRANSFAC - 36868311 36868320 4.0E-06 TGAATATTTA 10 V_WT1_Q6_01_M02036 TRANSFAC - 36866701 36866710 4.0E-06 CGCCCCCGCC 10 V_ETS_Q4_M00771 TRANSFAC + 36863275 36863286 1.0E-05 AAACGCTTCCTG 12 V_ETS_Q4_M00771 TRANSFAC - 36867157 36867168 6.0E-06 ATGCACTTCCTC 12 V_GC_01_M00255 TRANSFAC - 36867279 36867292 2.0E-06 TGGGGGTGGGGCTG 14 V_SOX7_03_M02807 TRANSFAC - 36868420 36868441 4.0E-06 TATTATCAACAATGAGGTTTAT 22 V_DBP_Q6_01_M01872 TRANSFAC - 36868449 36868456 5.0E-06 TTATGTAA 8 V_CEBPE_Q6_M01868 TRANSFAC + 36863784 36863797 1.0E-06 AAAAATTTCTTCAG 14 V_ZFP105_03_M02827 TRANSFAC - 36868427 36868441 9.0E-06 TATTATCAACAATGA 15 V_E4BP4_01_M00045 TRANSFAC - 36868447 36868458 7.0E-06 ACTTATGTAAGT 12 V_GFI1_01_M00250 TRANSFAC - 36865012 36865035 5.0E-06 GTAAATCAAATCACTTCGCTCCCT 24 V_GFI1_01_M00250 TRANSFAC - 36865017 36865040 4.0E-06 TACAAGTAAATCAAATCACTTCGC 24 V_STAF_01_M00262 TRANSFAC + 36863549 36863570 1.0E-06 AATCCCCAGAATGCTTCGCGGC 22 V_STAF_01_M00262 TRANSFAC - 36867157 36867178 8.0E-06 GCCAACCAGCATGCACTTCCTC 22 V_NKX26_01_M01322 TRANSFAC + 36863157 36863172 8.0E-06 CAAACCACTTAGCTTC 16 V_NKX26_01_M01322 TRANSFAC - 36863710 36863725 4.0E-06 GGAGCCACTTGATCTT 16 V_POLY_C_M00212 TRANSFAC - 36867029 36867046 2.0E-06 CAATAAAGCTCCCTCCAG 18 V_IRF5_04_M02873 TRANSFAC + 36868398 36868412 6.0E-06 GTGAGCGAGAATTGT 15 V_MRF2_01_M00454 TRANSFAC + 36863543 36863556 7.0E-06 AACTACAATCCCCA 14 V_KROX_Q6_M00982 TRANSFAC - 36866699 36866712 3.0E-06 CACGCCCCCGCCCC 14 V_IRX4_01_M01410 TRANSFAC - 36865028 36865044 3.0E-06 TCTCTACAAGTAAATCA 17 V_SP1_Q6_M00196 TRANSFAC + 36866697 36866709 4.0E-06 GGGGGGCGGGGGC 13 V_HOXC11_01_M01329 TRANSFAC - 36862887 36862902 4.0E-06 TGAGGTCGTAAAGAGA 16 V_SOX_Q6_M01014 TRANSFAC - 36863760 36863772 6.0E-06 TTCTTTGTTTTCT 13 V_HIC1_05_M02763 TRANSFAC + 36868237 36868252 6.0E-06 CTTATGCCAGCCTTTC 16 V_SFPI1_04_M02896 TRANSFAC + 36863774 36863787 7.0E-06 AAAAATAGGGAAAA 14 V_OCT1_04_M00138 TRANSFAC - 36868301 36868323 1.0E-05 GACTGAATATTTAAAAGAAGAGA 23 V_HBP1_03_M02762 TRANSFAC - 36863627 36863642 3.0E-06 GGAATGAATGAACGAC 16 V_HBP1_03_M02762 TRANSFAC - 36863646 36863661 5.0E-06 CGGTTCAATGAATGCG 16 V_HOXC12_01_M01437 TRANSFAC - 36862886 36862902 8.0E-06 TGAGGTCGTAAAGAGAG 17 V_PAX8_01_M00717 TRANSFAC + 36867039 36867053 3.0E-06 CTTTATTGAGTGATA 15 V_HOXA11_01_M01378 TRANSFAC - 36862887 36862902 5.0E-06 TGAGGTCGTAAAGAGA 16 V_STAF_02_M00264 TRANSFAC + 36863549 36863569 1.0E-06 AATCCCCAGAATGCTTCGCGG 21 V_TBP_06_M02814 TRANSFAC + 36868305 36868320 8.0E-06 TTCTTTTAAATATTCA 16 V_SOX11_03_M02795 TRANSFAC + 36863759 36863775 0.0E+00 AAGAAAACAAAGAAGAA 17 V_FOXO1_Q5_M01216 TRANSFAC + 36863761 36863769 5.0E-06 GAAAACAAA 9 V_NKX32_02_M01482 TRANSFAC + 36863156 36863172 7.0E-06 GCAAACCACTTAGCTTC 17 V_SP4_Q5_M01273 TRANSFAC - 36866681 36866691 8.0E-06 GCCCCGCCCCT 11 V_SP4_Q5_M01273 TRANSFAC - 36866698 36866708 5.0E-06 CCCCCGCCCCC 11 V_ELF1_Q6_M00746 TRANSFAC + 36867153 36867164 8.0E-06 AATGGAGGAAGT 12 V_IRX3_02_M01485 TRANSFAC - 36865028 36865044 7.0E-06 TCTCTACAAGTAAATCA 17 V_MTF1_06_M02882 TRANSFAC + 36863767 36863780 0.0E+00 AAAGAAGAAAAATA 14 V_LBP9_01_M01592 TRANSFAC - 36867119 36867135 2.0E-06 CCAGACTCAGCCAGTCT 17 V_NKX25_03_M01414 TRANSFAC + 36863157 36863172 8.0E-06 CAAACCACTTAGCTTC 16 V_NKX25_03_M01414 TRANSFAC - 36863710 36863725 5.0E-06 GGAGCCACTTGATCTT 16 V_MRG2_01_M01395 TRANSFAC - 36864993 36865008 7.0E-06 AATAGCCTGTCATAGC 16 V_TAL1_01_M01591 TRANSFAC + 36868295 36868307 6.0E-06 TTTGCTTCTCTTC 13 V_OSR2_04_M02889 TRANSFAC + 36868440 36868455 0.0E+00 TACTGCTACTTACATA 16 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC + 36866841 36866849 8.0E-06 GAGGGTGGG 9 V_CAAT_C_M00200 TRANSFAC - 36867154 36867178 5.0E-06 GCCAACCAGCATGCACTTCCTCCAT 25 V_FOXL1_04_M02753 TRANSFAC + 36863756 36863772 7.0E-06 CTTAAGAAAACAAAGAA 17 V_FOXL1_04_M02753 TRANSFAC - 36868426 36868442 3.0E-06 GTATTATCAACAATGAG 17 V_EBNA1_01_M01745 TRANSFAC + 36863269 36863284 8.0E-06 GGAAGAAAACGCTTCC 16 V_MYOGNF1_01_M00056 TRANSFAC + 36866945 36866973 3.0E-06 TACTCCCGCTGTTTGGCAGGTCCCAAGTT 29 V_GFI1B_01_M01058 TRANSFAC - 36865018 36865029 6.0E-06 CAAATCACTTCG 12 V_GFI1B_01_M01058 TRANSFAC - 36865023 36865034 9.0E-06 TAAATCAAATCA 12 V_ZBTB12_03_M02824 TRANSFAC + 36863107 36863123 1.0E-06 CCCGGGTTCTAGAACAG 17 V_FOXO3_01_M00477 TRANSFAC - 36863758 36863771 1.0E-06 TCTTTGTTTTCTTA 14 V_STAT1STAT1_Q3_M01212 TRANSFAC - 36868303 36868315 5.0E-06 ATTTAAAAGAAGA 13 V_ETS1_B_M00339 TRANSFAC - 36866801 36866815 8.0E-06 ACAGGAAGCGGTGGC 15 V_ETS1_B_M00339 TRANSFAC + 36867156 36867170 8.0E-06 GGAGGAAGTGCATGC 15 V_ZFP281_01_M01597 TRANSFAC - 36867282 36867292 1.0E-06 TGGGGGTGGGG 11 V_SREBP_Q3_M00776 TRANSFAC - 36865080 36865091 9.0E-06 ATGATCACACCA 12 V_BBX_03_M02739 TRANSFAC + 36863647 36863661 9.0E-06 GCATTCATTGAACCG 15 V_SOX2_01_M02246 TRANSFAC - 36863757 36863771 5.0E-06 TCTTTGTTTTCTTAA 15 V_SRF_06_M02916 TRANSFAC + 36863756 36863772 3.0E-06 CTTAAGAAAACAAAGAA 17 V_SATB1_01_M01232 TRANSFAC - 36868430 36868441 6.0E-06 TATTATCAACAA 12 V_HOXC10_01_M01361 TRANSFAC - 36862887 36862902 4.0E-06 TGAGGTCGTAAAGAGA 16 V_SOX12_03_M02796 TRANSFAC + 36868427 36868440 3.0E-06 TCATTGTTGATAAT 14 V_FREAC4_01_M00292 TRANSFAC + 36863756 36863771 4.0E-06 CTTAAGAAAACAAAGA 16 V_SP1_Q2_01_M00933 TRANSFAC - 36866681 36866690 7.0E-06 CCCCGCCCCT 10 V_SP1_Q2_01_M00933 TRANSFAC - 36866698 36866707 4.0E-06 CCCCGCCCCC 10 V_LPOLYA_B_M00318 TRANSFAC - 36867039 36867046 7.0E-06 CAATAAAG 8 V_MAFK_04_M02880 TRANSFAC - 36868360 36868374 7.0E-06 TGAAAACTTGCAATA 15 V_SP1_Q4_01_M00932 TRANSFAC + 36866697 36866709 8.0E-06 GGGGGGCGGGGGC 13 V_ATATA_B_M00311 TRANSFAC + 36868449 36868458 1.0E-05 TTACATAAGT 10 V_FOXK1_03_M02752 TRANSFAC - 36868426 36868442 7.0E-06 GTATTATCAACAATGAG 17 V_SMAD1_01_M01590 TRANSFAC + 36863761 36863772 3.0E-06 GAAAACAAAGAA 12 V_NANOG_02_M01247 TRANSFAC + 36863757 36863776 0.0E+00 TTAAGAAAACAAAGAAGAAA 20 V_NKX21_01_M01312 TRANSFAC - 36863710 36863725 2.0E-06 GGAGCCACTTGATCTT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.