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C9orf3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 84909 chromosome 9 open reading frame 3 chr9 + 97483950 - 97489450 97488950 Transcription Factor Binding Sites   Download all TFBS in the C9orf3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 97484759 97484776 7.0E-06 TTTGTATATATAAACACA 18 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 97487087 97487099 9.0E-06 GCAAAAATCAACA 13 POU2F1_POU_DBD_dimeric_14_1 SELEX + 97484647 97484660 5.0E-06 CATGAATACTCATC 14 SOX10_HMG_full_dimeric_15_3 SELEX - 97484573 97484587 6.0E-06 ATGATTTTCATTAAT 15 RARB_nuclearreceptor_full_dimeric_16_1 SELEX - 97486961 97486976 6.0E-06 GCAGATCACAAGGTCA 16 SOX2_HMG_full_dimeric_17_1 SELEX - 97484657 97484673 6.0E-06 CAAAACTTACATTGATG 17 FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 97484701 97484717 5.0E-06 GTAACCAAATGAATACA 17 POU3F2_POU_DBD_monomeric_13_1 SELEX + 97484759 97484771 7.0E-06 TTTGTATATATAA 13 SOX9_HMG_full_dimeric_17_3 SELEX - 97484572 97484588 5.0E-06 TATGATTTTCATTAATG 17 CEBPA_MA0102.2 JASPAR + 97488756 97488764 4.0E-06 TTTTGCAAT 9 TBX19_TBX_DBD_dimeric_20_1 SELEX - 97487152 97487171 6.0E-06 GTTAACACAAAGGAGTGAAG 20 EWSR1-FLI1_MA0149.1 JASPAR - 97489060 97489077 0.0E+00 GGAGGAGAGGAAGGCAGG 18 Esrrb_MA0141.1 JASPAR - 97486961 97486972 9.0E-06 ATCACAAGGTCA 12 SOX7_HMG_full_dimeric_17_2 SELEX - 97484572 97484588 5.0E-06 TATGATTTTCATTAATG 17 XBP1_bZIP_DBD_dimeric_12_1 SELEX + 97488948 97488959 0.0E+00 GATGACGTCACC 12 XBP1_bZIP_DBD_dimeric_12_1 SELEX - 97488948 97488959 0.0E+00 GGTGACGTCATC 12 Pknox2_MEIS_DBD_dimeric_12_1 SELEX - 97484724 97484735 7.0E-06 TGACATGAGTCA 12 SOX15_HMG_full_dimeric_15_3 SELEX - 97484573 97484587 8.0E-06 ATGATTTTCATTAAT 15 TGIF2_MEIS_DBD_dimeric_12_1 SELEX - 97484724 97484735 8.0E-06 TGACATGAGTCA 12 Creb5_bZIP_DBD_dimeric_12_1 SELEX + 97488948 97488959 0.0E+00 GATGACGTCACC 12 Creb5_bZIP_DBD_dimeric_12_1 SELEX - 97488948 97488959 5.0E-06 GGTGACGTCATC 12 Pax4_MA0068.1 JASPAR + 97484538 97484567 1.0E-06 GAAAAAAGTCACTAATGAAAATCATATCTC 30 Pax4_MA0068.1 JASPAR + 97484581 97484610 1.0E-05 AAATCATATCCACTAGGGAGTACACATTCC 30 RORA_nuclearreceptor_DBD_dimeric_19_1 SELEX + 97488770 97488788 2.0E-06 ATACTAGGGTACCAGGGCA 19 JDP2_bZIP_full_dimeric_12_1 SELEX + 97488948 97488959 0.0E+00 GATGACGTCACC 12 JDP2_bZIP_full_dimeric_12_1 SELEX - 97488948 97488959 2.0E-06 GGTGACGTCATC 12 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX - 97484752 97484765 3.0E-06 ATACAAAATCAACA 14 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX - 97488726 97488739 6.0E-06 GAAAAAAATCACCA 14 ESR1_MA0112.2 JASPAR + 97484725 97484744 4.0E-06 GACTCATGTCACTTTGACTC 20 ATF7_bZIP_DBD_dimeric_14_1 SELEX + 97488947 97488960 1.0E-06 GGATGACGTCACCC 14 ATF7_bZIP_DBD_dimeric_14_1 SELEX - 97488947 97488960 2.0E-06 GGGTGACGTCATCC 14 POU2F3_POU_DBD_dimeric_12_1 SELEX + 97484648 97484659 6.0E-06 ATGAATACTCAT 12 POU2F3_POU_DBD_dimeric_12_1 SELEX - 97484648 97484659 9.0E-06 ATGAGTATTCAT 12 SOX14_HMG_DBD_dimeric_13_1 SELEX - 97484659 97484671 3.0E-06 AAACTTACATTGA 13 CREB3_bZIP_full_dimeric_14_1 SELEX + 97488947 97488960 1.0E-06 GGATGACGTCACCC 14 CREB3_bZIP_full_dimeric_14_1 SELEX - 97488947 97488960 1.0E-06 GGGTGACGTCATCC 14 ZBTB49_C2H2_DBD_monomeric_17_1 SELEX - 97488911 97488927 1.0E-06 TTCTGCCTGACCCGCCT 17 NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX - 97486960 97486975 6.0E-06 CAGATCACAAGGTCAG 16 TGIF2LX_MEIS_full_dimeric_12_1 SELEX - 97484724 97484735 4.0E-06 TGACATGAGTCA 12 POU5F1P1_POU_DBD_monomeric_12_1 SELEX + 97484648 97484659 7.0E-06 ATGAATACTCAT 12 POU5F1P1_POU_DBD_monomeric_12_1 SELEX - 97484648 97484659 7.0E-06 ATGAGTATTCAT 12 SOX18_HMG_full_dimeric_15_3 SELEX - 97484573 97484587 3.0E-06 ATGATTTTCATTAAT 15 Sox3_HMG_DBD_dimeric_17_3 SELEX - 97484572 97484588 3.0E-06 TATGATTTTCATTAATG 17 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX - 97486961 97486975 2.0E-06 CAGATCACAAGGTCA 15 BATF3_bZIP_DBD_dimeric_14_1 SELEX + 97488947 97488960 2.0E-06 GGATGACGTCACCC 14 BATF3_bZIP_DBD_dimeric_14_1 SELEX - 97488947 97488960 2.0E-06 GGGTGACGTCATCC 14 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 97487087 97487099 7.0E-06 GCAAAAATCAACA 13 V_FOXP3_Q4_M00992 TRANSFAC + 97484717 97484733 2.0E-06 AAGATGTTGACTCATGT 17 V_MEQCJUN_02_M02048 TRANSFAC + 97488948 97488958 3.0E-06 GATGACGTCAC 11 V_MEQCJUN_02_M02048 TRANSFAC - 97488949 97488959 1.0E-06 GGTGACGTCAT 11 V_EVI1_05_M00082 TRANSFAC - 97484556 97484566 1.0E-05 AGATATGATTT 11 V_BACH2_01_M00490 TRANSFAC - 97484722 97484732 5.0E-06 CATGAGTCAAC 11 V_BACH2_01_M00490 TRANSFAC + 97487011 97487021 2.0E-06 CGTGAGTCACC 11 V_SOX14_05_M02902 TRANSFAC - 97487156 97487170 9.0E-06 TTAACACAAAGGAGT 15 V_ALX4_01_M00619 TRANSFAC - 97484687 97484699 4.0E-06 CCTGAGAATACTA 13 V_ESR1_01_M02261 TRANSFAC + 97484725 97484744 4.0E-06 GACTCATGTCACTTTGACTC 20 V_CEBP_Q3_M00770 TRANSFAC + 97484666 97484677 7.0E-06 AAGTTTTGCAAG 12 V_CEBP_Q3_M00770 TRANSFAC + 97488753 97488764 1.0E-06 AGATTTTGCAAT 12 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC + 97487089 97487100 2.0E-06 AAAAATCAACAG 12 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC - 97488725 97488736 4.0E-06 AAAAATCACCAG 12 V_CREB_Q4_M00178 TRANSFAC - 97488948 97488959 1.0E-06 GGTGACGTCATC 12 V_MMEF2_Q6_M00405 TRANSFAC - 97484760 97484775 8.0E-06 GTGTTTATATATACAA 16 V_MAFB_03_M02879 TRANSFAC - 97488752 97488766 0.0E+00 TAATTGCAAAATCTT 15 V_OCT1_Q5_01_M00930 TRANSFAC - 97484551 97484561 1.0E-06 TGATTTTCATT 11 V_OCT1_Q5_01_M00930 TRANSFAC - 97484576 97484586 1.0E-06 TGATTTTCATT 11 V_ISL2_01_M01328 TRANSFAC + 97484565 97484580 2.0E-06 CTCAACCCATTAATGA 16 V_CEBP_Q2_M00190 TRANSFAC - 97488753 97488766 9.0E-06 TAATTGCAAAATCT 14 V_IRF3_05_M02767 TRANSFAC - 97489421 97489434 3.0E-06 TCGAATCGAAACTG 14 V_FOXJ1_03_M02750 TRANSFAC - 97484755 97484770 7.0E-06 TATATATACAAAATCA 16 V_JUNDM2_03_M02772 TRANSFAC + 97488946 97488961 1.0E-06 TGGATGACGTCACCCG 16 V_JUNDM2_03_M02772 TRANSFAC - 97488946 97488961 1.0E-06 CGGGTGACGTCATCCA 16 V_OCT_C_M00210 TRANSFAC - 97484550 97484562 7.0E-06 ATGATTTTCATTA 13 V_OCT_C_M00210 TRANSFAC - 97484575 97484587 7.0E-06 ATGATTTTCATTA 13 V_LYF1_01_M00141 TRANSFAC - 97486986 97486994 3.0E-06 TTTGGGAGA 9 V_CEBPB_01_M00109 TRANSFAC + 97488753 97488766 4.0E-06 AGATTTTGCAATTA 14 V_OCT2_02_M01761 TRANSFAC + 97484649 97484658 8.0E-06 TGAATACTCA 10 V_BCL6_02_M01185 TRANSFAC - 97487214 97487227 3.0E-06 GGCTTTCTTAGGCT 14 V_HNF1_C_M00206 TRANSFAC + 97488726 97488742 1.0E-05 TGGTGATTTTTTTCTTA 17 V_CP2_02_M00947 TRANSFAC - 97488795 97488809 3.0E-06 GCTGGCTAGGGCTTG 15 V_ELF4_04_M02850 TRANSFAC - 97488729 97488745 4.0E-06 GCTTAAGAAAAAAATCA 17 V_BACH1_01_M00495 TRANSFAC - 97484720 97484734 5.0E-06 GACATGAGTCAACAT 15 V_BACH1_01_M00495 TRANSFAC + 97487009 97487023 9.0E-06 GGCGTGAGTCACCAT 15 V_DBX2_01_M01360 TRANSFAC - 97484567 97484582 8.0E-06 TTTCATTAATGGGTTG 16 V_OCT1_02_M00136 TRANSFAC - 97484645 97484659 1.0E-05 ATGAGTATTCATGTC 15 V_CART1_01_M00416 TRANSFAC + 97484547 97484564 4.0E-06 CACTAATGAAAATCATAT 18 V_CART1_01_M00416 TRANSFAC + 97484572 97484589 6.0E-06 CATTAATGAAAATCATAT 18 V_TEF_Q6_M00672 TRANSFAC + 97484760 97484771 1.0E-06 TTGTATATATAA 12 V_NKX61_01_M00424 TRANSFAC - 97484568 97484580 7.0E-06 TCATTAATGGGTT 13 V_XFD3_01_M00269 TRANSFAC - 97484717 97484730 2.0E-06 TGAGTCAACATCTT 14 V_RSRFC4_Q2_M00407 TRANSFAC + 97484759 97484775 4.0E-06 TTTGTATATATAAACAC 17 V_TBX5_02_M01020 TRANSFAC + 97484747 97484756 6.0E-06 TGAGGTGTTG 10 V_HOXB6_01_M01460 TRANSFAC - 97488757 97488772 4.0E-06 TATTCCTAATTGCAAA 16 V_OCT1_05_M00161 TRANSFAC - 97484549 97484562 5.0E-06 ATGATTTTCATTAG 14 V_BCL6_Q3_M01171 TRANSFAC + 97486994 97487003 8.0E-06 AGTTCTAGGA 10 V_JUNDM2_04_M02876 TRANSFAC + 97487008 97487023 9.0E-06 AGGCGTGAGTCACCAT 16 V_CREBATF_Q6_M00981 TRANSFAC - 97488950 97488958 9.0E-06 GTGACGTCA 9 V_OCT1_04_M00138 TRANSFAC - 97484751 97484773 1.0E-05 GTTTATATATACAAAATCAACAC 23 V_OCT1_04_M00138 TRANSFAC + 97484752 97484774 5.0E-06 TGTTGATTTTGTATATATAAACA 23 V_IK2_01_M00087 TRANSFAC + 97488762 97488773 8.0E-06 AATTAGGAATAC 12 V_SOX12_04_M02900 TRANSFAC - 97487156 97487171 5.0E-06 GTTAACACAAAGGAGT 16 V_MUSCLE_INI_B_M00321 TRANSFAC - 97489078 97489098 4.0E-06 CCCCGCCGCCATCCCGACGCC 21 V_IRF4_03_M02768 TRANSFAC - 97489419 97489433 1.0E-06 CGAATCGAAACTGTT 15 V_ATF3_Q6_M00513 TRANSFAC + 97487055 97487068 2.0E-06 ATCTGACATCACCG 14 V_ATF3_Q6_M00513 TRANSFAC + 97488947 97488960 5.0E-06 GGATGACGTCACCC 14 V_ATF3_Q6_M00513 TRANSFAC - 97488947 97488960 2.0E-06 GGGTGACGTCATCC 14 V_ISGF3G_03_M02771 TRANSFAC - 97489420 97489434 5.0E-06 TCGAATCGAAACTGT 15 V_AP1_01_M00517 TRANSFAC + 97487010 97487022 8.0E-06 GCGTGAGTCACCA 13 V_TBP_06_M02814 TRANSFAC + 97484759 97484774 1.0E-06 TTTGTATATATAAACA 16 V_TBP_06_M02814 TRANSFAC - 97484759 97484774 2.0E-06 TGTTTATATATACAAA 16 V_IK3_01_M00088 TRANSFAC + 97488762 97488774 6.0E-06 AATTAGGAATACT 13 V_OCT_Q6_M00795 TRANSFAC - 97484551 97484561 5.0E-06 TGATTTTCATT 11 V_OCT_Q6_M00795 TRANSFAC - 97484576 97484586 5.0E-06 TGATTTTCATT 11 V_CREM_Q6_M01820 TRANSFAC - 97488947 97488957 6.0E-06 TGACGTCATCC 11 V_CREM_Q6_M01820 TRANSFAC + 97488950 97488960 1.0E-06 TGACGTCACCC 11 V_VJUN_01_M00036 TRANSFAC - 97488946 97488961 0.0E+00 CGGGTGACGTCATCCA 16 V_MTF1_06_M02882 TRANSFAC - 97488732 97488745 5.0E-06 GCTTAAGAAAAAAA 14 V_IRF5_03_M02769 TRANSFAC - 97489420 97489434 3.0E-06 TCGAATCGAAACTGT 15 V_CEBPA_01_M00116 TRANSFAC - 97488753 97488766 0.0E+00 TAATTGCAAAATCT 14 V_OCT1_Q6_M00195 TRANSFAC + 97484573 97484587 5.0E-06 ATTAATGAAAATCAT 15 V_FOXL1_04_M02753 TRANSFAC - 97484756 97484772 5.0E-06 TTTATATATACAAAATC 17 V_ATF1_03_M02738 TRANSFAC + 97488946 97488961 3.0E-06 TGGATGACGTCACCCG 16 V_ATF1_03_M02738 TRANSFAC - 97488946 97488961 3.0E-06 CGGGTGACGTCATCCA 16 V_ATF2_Q5_M01862 TRANSFAC - 97488949 97488960 3.0E-06 GGGTGACGTCAT 12 V_GATA6_01_M00462 TRANSFAC - 97487035 97487044 9.0E-06 AAAGATAATC 10 V_ZFP206_01_M01742 TRANSFAC - 97488847 97488857 1.0E-06 TGCGCAGGCGC 11 V_CREB_Q2_M00177 TRANSFAC - 97488948 97488959 7.0E-06 GGTGACGTCATC 12 V_TBX15_02_M01264 TRANSFAC - 97489236 97489253 4.0E-06 AGGTGGTAAGATGTGACC 18 V_FOX_Q2_M00809 TRANSFAC - 97487090 97487102 9.0E-06 CTCTGTTGATTTT 13 V_RSRFC4_01_M00026 TRANSFAC - 97484759 97484774 7.0E-06 TGTTTATATATACAAA 16 V_SRF_06_M02916 TRANSFAC - 97488728 97488744 3.0E-06 CTTAAGAAAAAAATCAC 17 V_SRF_06_M02916 TRANSFAC - 97488729 97488745 1.0E-06 GCTTAAGAAAAAAATCA 17 V_EWSR1FLI1_01_M02252 TRANSFAC - 97489060 97489077 0.0E+00 GGAGGAGAGGAAGGCAGG 18 V_SIX6_08_M02897 TRANSFAC - 97484758 97484774 6.0E-06 TGTTTATATATACAAAA 17 V_SIX6_08_M02897 TRANSFAC + 97484759 97484775 5.0E-06 TTTGTATATATAAACAC 17 V_IRF1_01_M00062 TRANSFAC - 97484750 97484762 8.0E-06 CAAAATCAACACC 13 V_CREB_02_M00113 TRANSFAC + 97488946 97488957 0.0E+00 TGGATGACGTCA 12 V_CREB_02_M00113 TRANSFAC - 97488950 97488961 2.0E-06 CGGGTGACGTCA 12 V_FREAC4_01_M00292 TRANSFAC - 97484717 97484732 7.0E-06 CATGAGTCAACATCTT 16 V_FREAC4_01_M00292 TRANSFAC + 97487088 97487103 5.0E-06 CAAAAATCAACAGAGC 16 V_CEBP_Q2_01_M00912 TRANSFAC - 97488753 97488764 1.0E-06 ATTGCAAAATCT 12 V_BRN3C_01_M01408 TRANSFAC + 97484569 97484584 8.0E-06 ACCCATTAATGAAAAT 16 V_GATA1_02_M00126 TRANSFAC - 97487033 97487046 7.0E-06 TAAAAGATAATCGA 14 V_ZFP128_04_M02932 TRANSFAC + 97484759 97484772 1.0E-06 TTTGTATATATAAA 14 V_ZFP128_04_M02932 TRANSFAC - 97484759 97484772 1.0E-06 TTTATATATACAAA 14 V_ATF_B_M00338 TRANSFAC - 97488947 97488958 1.0E-06 GTGACGTCATCC 12 V_ATF_B_M00338 TRANSFAC + 97488949 97488960 9.0E-06 ATGACGTCACCC 12 V_PBX1_04_M01357 TRANSFAC + 97484652 97484668 3.0E-06 ATACTCATCAATGTAAG 17 V_CEBPE_01_M01772 TRANSFAC + 97488755 97488764 8.0E-06 ATTTTGCAAT 10 V_CEBPG_Q6_01_M01869 TRANSFAC - 97488754 97488765 2.0E-06 AATTGCAAAATC 12 V_FOXK1_03_M02752 TRANSFAC - 97484756 97484772 7.0E-06 TTTATATATACAAAATC 17 V_NR2F2_04_M02887 TRANSFAC + 97487062 97487077 8.0E-06 ATCACCGGGTCAGCAT 16 V_PAX4_04_M00380 TRANSFAC + 97484538 97484567 6.0E-06 GAAAAAAGTCACTAATGAAAATCATATCTC 30 V_CEBPA_Q6_M01866 TRANSFAC + 97484666 97484678 6.0E-06 AAGTTTTGCAAGT 13 V_CEBPA_Q6_M01866 TRANSFAC + 97488753 97488765 0.0E+00 AGATTTTGCAATT 13

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