Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

GALR3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 8484 galanin receptor 3 chr22 + 38214388 - 38219888 38219388 Transcription Factor Binding Sites   Download all TFBS in the GALR3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HINFP1_C2H2_full_dimeric_19_1 SELEX + 38221048 38221066 9.0E-06 GCGGAGGGCGACGGGCCGC 19 GABPA_MA0062.2 JASPAR - 38221257 38221267 7.0E-06 GCGGAAGTGGC 11 NFIX_NFI_full_dimeric_15_2 SELEX - 38223282 38223296 1.0E-05 CTGGCAGCAGGCCAT 15 STAT1_MA0137.2 JASPAR - 38223161 38223175 8.0E-06 CACTTCCAAGAAGGG 15 MEOX2_homeodomain_DBD_dimeric_14_1 SELEX + 38223370 38223383 9.0E-06 GTAATAATAATAAC 14 MNT_bHLH_DBD_dimeric_10_1 SELEX - 38214898 38214907 6.0E-06 AACACGTGCA 10 ETV6_ETS_full_monomeric_10_1 SELEX - 38221259 38221268 5.0E-06 CGCGGAAGTG 10 REST_MA0138.2 JASPAR + 38214543 38214563 4.0E-06 TTAAGCGCCACGGGCAGCTGC 21 NHLH1_bHLH_full_dimeric_10_1 SELEX - 38214555 38214564 9.0E-06 CGCAGCTGCC 10 V_TEL1_02_M02070 TRANSFAC - 38221259 38221268 8.0E-06 CGCGGAAGTG 10 V_BCL6_Q3_01_M02085 TRANSFAC - 38223164 38223173 7.0E-06 CTTCCAAGAA 10 V_TCFE2A_04_M02927 TRANSFAC + 38223356 38223372 3.0E-06 AAGAGCAGATGGTCGTA 17 V_SRY_07_M02813 TRANSFAC + 38223369 38223384 9.0E-06 CGTAATAATAATAACT 16 TAL1_TCF3_MA0091.1 JASPAR - 38223359 38223370 7.0E-06 CGACCATCTGCT 12 V_GM397_03_M02760 TRANSFAC - 38214463 38214479 9.0E-06 CCCTTGTGCACATCCCC 17 V_AP4_Q6_01_M00927 TRANSFAC + 38214988 38214996 6.0E-06 ACCAGCTGC 9 V_SOX21_03_M02803 TRANSFAC + 38223369 38223384 5.0E-06 CGTAATAATAATAACT 16 V_SOX21_03_M02803 TRANSFAC - 38223369 38223384 6.0E-06 AGTTATTATTATTACG 16 V_CDP_04_M01344 TRANSFAC + 38223371 38223385 1.0E-06 TAATAATAATAACTC 15 V_TAL1_Q6_M00993 TRANSFAC - 38223359 38223368 7.0E-06 ACCATCTGCT 10 V_OCT1_03_M00137 TRANSFAC + 38223367 38223379 3.0E-06 GTCGTAATAATAA 13 V_OCT1_03_M00137 TRANSFAC + 38223370 38223382 6.0E-06 GTAATAATAATAA 13 V_CART1_01_M00416 TRANSFAC - 38223368 38223385 1.0E-05 GAGTTATTATTATTACGA 18 V_NGFIC_01_M00244 TRANSFAC - 38221173 38221184 9.0E-06 AGGCGTAGGTGG 12 V_AMEF2_Q6_M00403 TRANSFAC + 38223369 38223386 8.0E-06 CGTAATAATAATAACTCA 18 V_FOXK1_04_M02856 TRANSFAC + 38223370 38223384 7.0E-06 GTAATAATAATAACT 15 V_CUX1_04_M02959 TRANSFAC + 38223371 38223385 1.0E-06 TAATAATAATAACTC 15 V_HOX13_01_M00023 TRANSFAC - 38214476 38214505 6.0E-06 CTGCTGGCTCGACATTACTGGTTGAGCCCT 30 V_MUSCLE_INI_B_M00321 TRANSFAC - 38214558 38214578 7.0E-06 GCCACACGTCACCCCGCAGCT 21 V_GRE_C_M00205 TRANSFAC + 38214800 38214815 8.0E-06 GGCTCAGCGTGTCCTG 16 V_MEF2_Q6_01_M00941 TRANSFAC - 38223373 38223384 1.0E-05 AGTTATTATTAT 12 V_TEL1_01_M01993 TRANSFAC - 38221259 38221268 8.0E-06 CGCGGAAGTG 10 V_STAT3_03_M01595 TRANSFAC + 38223162 38223177 4.0E-06 CCTTCTTGGAAGTGAG 16 V_NEUROD_02_M01288 TRANSFAC - 38218195 38218206 7.0E-06 TTGCTGCTGCCT 12 V_REST_02_M02256 TRANSFAC + 38214543 38214563 4.0E-06 TTAAGCGCCACGGGCAGCTGC 21 V_HSF_Q6_M00641 TRANSFAC + 38223309 38223321 8.0E-06 TTCCCGAGGCTCC 13 V_CTF1_01_M01196 TRANSFAC - 38223282 38223295 2.0E-06 TGGCAGCAGGCCAT 14 V_MEF2A_05_M01301 TRANSFAC - 38223373 38223384 3.0E-06 AGTTATTATTAT 12 V_HOXA10_01_M01464 TRANSFAC + 38223367 38223382 3.0E-06 GTCGTAATAATAATAA 16 TLX1_NFIC_MA0119.1 JASPAR - 38223282 38223295 2.0E-06 TGGCAGCAGGCCAT 14 V_STAT1_05_M01260 TRANSFAC + 38223161 38223182 2.0E-06 CCCTTCTTGGAAGTGAGGAGAC 22 V_SOX14_03_M02798 TRANSFAC + 38223369 38223384 8.0E-06 CGTAATAATAATAACT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.