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CCDC54 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 84692 coiled-coil domain containing 54 chr3 + 107091187 - 107096687 107096187 Transcription Factor Binding Sites   Download all TFBS in the CCDC54 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints MESP1_bHLH_DBD_dimeric_10_1 SELEX - 107096046 107096055 1.0E-06 AACACCTGTT 10 MYF6_bHLH_full_dimeric_10_1 SELEX + 107096046 107096055 5.0E-06 AACAGGTGTT 10 MYF6_bHLH_full_dimeric_10_1 SELEX - 107096046 107096055 5.0E-06 AACACCTGTT 10 NFIA_NFI_full_dimeric_15_1 SELEX + 107094237 107094251 2.0E-06 TTGGCATGGATCCAA 15 NFIA_NFI_full_dimeric_15_1 SELEX - 107094237 107094251 3.0E-06 TTGGATCCATGCCAA 15 SOX9_HMG_full_dimeric_16_1 SELEX - 107096276 107096291 6.0E-06 AGCAATAGACACTGTT 16 HSF1_HSF_full_trimeric_13_1 SELEX + 107096304 107096316 9.0E-06 TTCCAGAGTGTTC 13 SRY_HMG_DBD_dimeric_16_1 SELEX - 107096276 107096291 1.0E-05 AGCAATAGACACTGTT 16 SOX8_HMG_full_dimeric_17_1 SELEX + 107096078 107096094 7.0E-06 CAACAATTTCTATGATT 17 NFIX_NFI_full_dimeric_15_2 SELEX + 107094237 107094251 3.0E-06 TTGGCATGGATCCAA 15 NFIX_NFI_full_dimeric_15_2 SELEX - 107094237 107094251 3.0E-06 TTGGATCCATGCCAA 15 STAT1_MA0137.2 JASPAR + 107099000 107099014 4.0E-06 CTTTTCCAGGAATGT 15 SCRT2_C2H2_DBD_monomeric_13_1 SELEX + 107096042 107096054 1.0E-06 TAGCAACAGGTGT 13 NR4A2_nuclearreceptor_full_dimeric_17_1 SELEX + 107096183 107096199 2.0E-06 AGGTCAATGATTACCAT 17 NR4A2_nuclearreceptor_full_dimeric_17_1 SELEX - 107096183 107096199 3.0E-06 ATGGTAATCATTGACCT 17 POU6F2_POU_DBD_dimeric_16_1 SELEX - 107096258 107096273 8.0E-06 GTGATTAGCTTCTTAT 16 TCF4_bHLH_full_dimeric_10_1 SELEX - 107096046 107096055 2.0E-06 AACACCTGTT 10 FIGLA_bHLH_DBD_dimeric_10_1 SELEX - 107096046 107096055 1.0E-06 AACACCTGTT 10 HNF1A_homeodomain_full_dimeric_15_1 SELEX + 107096184 107096198 3.0E-06 GGTCAATGATTACCA 15 HNF1A_homeodomain_full_dimeric_15_1 SELEX - 107096184 107096198 5.0E-06 TGGTAATCATTGACC 15 POU2F3_POU_DBD_dimeric_12_1 SELEX - 107096137 107096148 9.0E-06 AAACATATTTAA 12 Tcf21_bHLH_DBD_dimeric_14_1 SELEX + 107096044 107096057 6.0E-06 GCAACAGGTGTTTT 14 SOX18_HMG_full_dimeric_15_1 SELEX + 107096079 107096093 7.0E-06 AACAATTTCTATGAT 15 SOX7_HMG_full_dimeric_16_1 SELEX + 107096079 107096094 7.0E-06 AACAATTTCTATGATT 16 SOX7_HMG_full_dimeric_16_1 SELEX + 107096276 107096291 1.0E-06 AACAGTGTCTATTGCT 16 SCRT1_C2H2_DBD_monomeric_15_1 SELEX + 107096042 107096056 0.0E+00 TAGCAACAGGTGTTT 15 HNF1B_homeodomain_full_dimeric_13_1 SELEX + 107096185 107096197 3.0E-06 GTCAATGATTACC 13 HNF1B_homeodomain_full_dimeric_13_1 SELEX - 107096185 107096197 2.0E-06 GGTAATCATTGAC 13 NKX2-3_homeodomain_full_monomeric_10_1 SELEX + 107098573 107098582 2.0E-06 ACCACTTAAC 10 POU3F1_POU_DBD_monomeric_12_1 SELEX - 107096190 107096201 8.0E-06 ATATGGTAATCA 12 Foxd3_MA0041.1 JASPAR + 107096141 107096152 3.0E-06 ATATGTTTGTTC 12 Stat3_MA0144.1 JASPAR - 107099002 107099011 4.0E-06 TTCCTGGAAA 10 NFIB_NFI_full_dimeric_15_1 SELEX + 107094237 107094251 2.0E-06 TTGGCATGGATCCAA 15 NFIB_NFI_full_dimeric_15_1 SELEX - 107094237 107094251 3.0E-06 TTGGATCCATGCCAA 15 Pou5f1_MA0142.1 JASPAR - 107096192 107096206 1.0E-06 CTTTCATATGGTAAT 15 SOX21_HMG_DBD_dimeric_16_1 SELEX - 107096276 107096291 1.0E-06 AGCAATAGACACTGTT 16 HMX2_homeodomain_DBD_monomeric_11_1 SELEX + 107098573 107098583 5.0E-06 ACCACTTAACT 11 IRF5_IRF_full_dimeric_14_1 SELEX + 107092320 107092333 3.0E-06 CTGAAACCAAAGCT 14 HNF1B_homeodomain_full_dimeric_15_1 SELEX + 107096184 107096198 2.0E-06 GGTCAATGATTACCA 15 HNF1B_homeodomain_full_dimeric_15_1 SELEX - 107096184 107096198 4.0E-06 TGGTAATCATTGACC 15 POU3F2_POU_DBD_monomeric_12_1 SELEX - 107096190 107096201 5.0E-06 ATATGGTAATCA 12 SNAI2_C2H2_DBD_monomeric_9_1 SELEX + 107096046 107096054 3.0E-06 AACAGGTGT 9 FOXO6_forkhead_DBD_dimeric_14_1 SELEX + 107096137 107096150 6.0E-06 TTAAATATGTTTGT 14 MSC_bHLH_full_dimeric_10_1 SELEX + 107096046 107096055 9.0E-06 AACAGGTGTT 10 MSC_bHLH_full_dimeric_10_1 SELEX - 107096046 107096055 2.0E-06 AACACCTGTT 10 TBX1_TBX_DBD_dimeric_20_1 SELEX - 107099071 107099090 7.0E-06 ACTTGTGAGAACATGTGGTA 20 TCF3_bHLH_DBD_dimeric_10_1 SELEX - 107096046 107096055 1.0E-06 AACACCTGTT 10 FOXO1_forkhead_DBD_dimeric_14_1 SELEX + 107096137 107096150 6.0E-06 TTAAATATGTTTGT 14 FOXO1_forkhead_DBD_dimeric_14_1 SELEX - 107096137 107096150 5.0E-06 ACAAACATATTTAA 14 V_FOXP1_01_M00987 TRANSFAC - 107098615 107098634 3.0E-06 ATATTTGTGGTTTAATATAT 20 V_CEBPG_Q6_M00622 TRANSFAC - 107094522 107094534 6.0E-06 CTCATGACACAAA 13 V_CEBPG_Q6_M00622 TRANSFAC - 107096166 107096178 4.0E-06 CTGATGTCACAAT 13 V_STAT5A_Q6_M01890 TRANSFAC + 107098999 107099011 5.0E-06 TCTTTTCCAGGAA 13 V_MYOD_Q6_M00184 TRANSFAC - 107096046 107096055 9.0E-06 AACACCTGTT 10 V_AR_02_M00953 TRANSFAC + 107096297 107096323 4.0E-06 TGATGATTTCCAGAGTGTTCTAAGATG 27 V_OSF2_Q6_M00731 TRANSFAC - 107098606 107098613 1.0E-05 ACCACAAA 8 V_BCL6B_03_M02740 TRANSFAC + 107099000 107099015 7.0E-06 CTTTTCCAGGAATGTG 16 V_NF1_Q6_01_M00806 TRANSFAC - 107094235 107094251 0.0E+00 TTGGATCCATGCCAATT 17 V_NF1A_Q6_M02103 TRANSFAC - 107094236 107094251 0.0E+00 TTGGATCCATGCCAAT 16 V_FOXD3_01_M00130 TRANSFAC + 107096141 107096152 3.0E-06 ATATGTTTGTTC 12 V_POU5F1_02_M02245 TRANSFAC - 107096192 107096206 1.0E-06 CTTTCATATGGTAAT 15 V_CBF_02_M01080 TRANSFAC + 107098603 107098618 7.0E-06 TCCTTTGTGGTCATAT 16 V_STAT5B_01_M00459 TRANSFAC - 107099000 107099014 9.0E-06 ACATTCCTGGAAAAG 15 V_HFH4_01_M00742 TRANSFAC - 107099039 107099051 6.0E-06 ATTAGTTTGCTAA 13 V_OCT_C_M00210 TRANSFAC + 107091472 107091484 8.0E-06 CTACTTAGCATGT 13 V_BARBIE_01_M00238 TRANSFAC + 107092324 107092338 3.0E-06 AACCAAAGCTGGTTG 15 V_HNF1_C_M00206 TRANSFAC - 107096182 107096198 2.0E-06 TGGTAATCATTGACCTG 17 V_HNF1_C_M00206 TRANSFAC + 107098611 107098627 6.0E-06 GGTCATATATTAAACCA 17 V_HNF3G_Q4_M02015 TRANSFAC + 107096144 107096151 7.0E-06 TGTTTGTT 8 V_GFI1_01_M00250 TRANSFAC - 107094205 107094228 1.0E-06 TTCTACCAAATCACTGTTTCTTCT 24 V_GATA3_05_M02859 TRANSFAC + 107096313 107096334 2.0E-06 GTTCTAAGATGTTATCAGGAAA 22 V_HNF1_Q6_M00790 TRANSFAC + 107096183 107096200 3.0E-06 AGGTCAATGATTACCATA 18 V_TEF_Q6_M00672 TRANSFAC + 107099077 107099088 6.0E-06 ATGTTCTCACAA 12 V_NKX31_02_M02782 TRANSFAC + 107098569 107098585 1.0E-06 CTTCACCACTTAACTCA 17 V_E47_02_M00071 TRANSFAC + 107096043 107096058 8.0E-06 AGCAACAGGTGTTTTT 16 V_HNF3_Q6_M00791 TRANSFAC - 107096142 107096154 3.0E-06 TAGAACAAACATA 13 V_OCT1_05_M00161 TRANSFAC + 107091472 107091485 5.0E-06 CTACTTAGCATGTG 14 V_OCT1_05_M00161 TRANSFAC + 107096189 107096202 2.0E-06 ATGATTACCATATG 14 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 107096144 107096154 2.0E-06 TGTTTGTTCTA 11 V_GR_01_M00955 TRANSFAC + 107096297 107096323 4.0E-06 TGATGATTTCCAGAGTGTTCTAAGATG 27 V_HBP1_03_M02762 TRANSFAC + 107098583 107098598 9.0E-06 TCAGTGAATGAACGCT 16 V_SOX12_04_M02900 TRANSFAC - 107094517 107094532 1.0E-06 CATGACACAAAGCATT 16 V_CDC5_01_M00478 TRANSFAC - 107098615 107098626 4.0E-06 GGTTTAATATAT 12 V_HB24_01_M01399 TRANSFAC - 107096132 107096146 1.0E-06 ACATATTTAACTACA 15 V_AP1_01_M00517 TRANSFAC + 107091518 107091530 8.0E-06 CCTTGAGTCAGCC 13 V_OCT4_02_M01124 TRANSFAC - 107096191 107096205 5.0E-06 TTTCATATGGTAATC 15 V_AP1_Q2_01_M00924 TRANSFAC - 107091516 107091527 3.0E-06 TGACTCAAGGGG 12 V_NKX32_02_M01482 TRANSFAC + 107091467 107091483 9.0E-06 CATAACTACTTAGCATG 17 V_NKX32_02_M01482 TRANSFAC + 107098569 107098585 1.0E-06 CTTCACCACTTAACTCA 17 V_ZFP105_04_M02931 TRANSFAC + 107096133 107096149 5.0E-06 GTAGTTAAATATGTTTG 17 V_MYOD_01_M00001 TRANSFAC + 107096045 107096056 1.0E-06 CAACAGGTGTTT 12 V_GATA1_05_M00346 TRANSFAC - 107096322 107096331 5.0E-06 CCTGATAACA 10 V_CBF_01_M01079 TRANSFAC + 107098603 107098618 9.0E-06 TCCTTTGTGGTCATAT 16 V_ZBTB12_04_M02928 TRANSFAC - 107096310 107096324 7.0E-06 ACATCTTAGAACACT 15 V_PADS_C_M00211 TRANSFAC - 107094532 107094540 8.0E-06 AGTGGTCTC 9 V_ZABC1_01_M01306 TRANSFAC - 107094230 107094237 1.0E-05 ATTCCAAC 8 V_PLZF_02_M01075 TRANSFAC + 107098609 107098637 6.0E-06 GTGGTCATATATTAAACCACAAATATTCC 29 V_MYF6_03_M02781 TRANSFAC + 107096042 107096057 2.0E-06 TAGCAACAGGTGTTTT 16 V_HSF2_02_M01244 TRANSFAC - 107096304 107096316 7.0E-06 GAACACTCTGGAA 13 V_FOXJ2_01_M00422 TRANSFAC - 107096139 107096156 6.0E-06 CTTAGAACAAACATATTT 18 V_NFE2_Q6_M02104 TRANSFAC + 107091519 107091534 6.0E-06 CTTGAGTCAGCCCACC 16 V_SOX5_07_M02909 TRANSFAC - 107096074 107096090 1.0E-06 ATAGAAATTGTTGAGCA 17 V_TAACC_B_M00331 TRANSFAC + 107098610 107098632 9.0E-06 TGGTCATATATTAAACCACAAAT 23 V_SOX5_04_M02910 TRANSFAC - 107096134 107096148 5.0E-06 AAACATATTTAACTA 15 V_STAT1_05_M01260 TRANSFAC - 107098993 107099014 0.0E+00 ACATTCCTGGAAAAGACATGAT 22 V_STAT1_05_M01260 TRANSFAC + 107099000 107099021 8.0E-06 CTTTTCCAGGAATGTGGCTGGA 22 V_NF1_Q6_M00193 TRANSFAC + 107094235 107094252 0.0E+00 AATTGGCATGGATCCAAG 18 V_OCT4_01_M01125 TRANSFAC - 107096192 107096206 2.0E-06 CTTTCATATGGTAAT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.