Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

PARD6G Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 84552 par-6 partitioning defective 6 homolog gamma (C. elegans) chr18 - 78004897 - 78010397 78005397 Transcription Factor Binding Sites   Download all TFBS in the PARD6G promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NKX2-8_homeodomain_full_monomeric_9_1 SELEX + 78007842 78007850 8.0E-06 GCACTTGAA 9 CTCF_MA0139.1 JASPAR + 78009725 78009743 6.0E-06 CTTTCAGCAGATGGCACCG 19 SP8_C2H2_DBD_monomeric_12_1 SELEX + 78005560 78005571 3.0E-06 ACCACGCCCCCA 12 VSX1_homeodomain_full_monomeric_11_1 SELEX + 78004281 78004291 9.0E-06 AGCCAATTACC 11 SP3_C2H2_DBD_monomeric_11_1 SELEX + 78005560 78005570 4.0E-06 ACCACGCCCCC 11 Foxk1_forkhead_DBD_putatively-multimeric_11_1 SELEX - 78004962 78004972 2.0E-06 CGGACACAAAG 11 Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX - 78010107 78010116 7.0E-06 GCCATAAAAT 10 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 78005483 78005493 1.0E-05 GCCCCGCCCCC 11 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 78005560 78005570 2.0E-06 ACCACGCCCCC 11 PROX1_PROX_DBD_dimeric_12_1 SELEX + 78007649 78007660 5.0E-06 GAAGACGCCTTT 12 Foxj3_forkhead_DBD_putatively-multimeric_11_1 SELEX - 78004963 78004973 5.0E-06 GCGGACACAAA 11 Pax4_MA0068.1 JASPAR - 78005709 78005738 7.0E-06 GAATATTACCCAAAACAATGGCAAAAATCA 30 FOXK1_forkhead_DBD_putatively-multimeric_10_1 SELEX - 78004963 78004972 3.0E-06 CGGACACAAA 10 Tcfcp2l1_MA0145.1 JASPAR + 78004269 78004282 8.0E-06 CCAGATCCTACCAG 14 Sox17_HMG_DBD_dimeric_15_2 SELEX - 78010319 78010333 7.0E-06 ATGAATCAGAGACAT 15 HOXC11_homeodomain_full_monomeric_11_2 SELEX - 78010107 78010117 6.0E-06 TGCCATAAAAT 11 SP1_MA0079.2 JASPAR + 78005484 78005493 7.0E-06 CCCCGCCCCC 10 FOXG1_forkhead_DBD_putatively-multimeric_12_1 SELEX - 78004962 78004973 4.0E-06 GCGGACACAAAG 12 SOX14_HMG_DBD_dimeric_13_1 SELEX - 78001865 78001877 8.0E-06 TCAATTCCACTGT 13 SP4_C2H2_full_monomeric_17_1 SELEX + 78005502 78005518 7.0E-06 GAGGACCCGCCCATATC 17 SP4_C2H2_full_monomeric_17_1 SELEX + 78005557 78005573 6.0E-06 CACACCACGCCCCCACG 17 SP1_C2H2_DBD_monomeric_11_1 SELEX - 78004514 78004524 7.0E-06 ACCCCACCCCC 11 SP1_C2H2_DBD_monomeric_11_1 SELEX + 78005560 78005570 1.0E-06 ACCACGCCCCC 11 PRDM4_C2H2_full_monomeric_13_1 SELEX + 78007688 78007700 4.0E-06 TTTCAAGTAGCCC 13 Hoxd9_homeodomain_DBD_monomeric_9_1 SELEX - 78010108 78010116 4.0E-06 GCCATAAAA 9 SRY_HMG_DBD_dimeric_13_1 SELEX - 78001865 78001877 8.0E-06 TCAATTCCACTGT 13 TP53_MA0106.1 JASPAR - 78004311 78004330 7.0E-06 CGGAGCGTGCCCGAACTTGC 20 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX - 78010107 78010117 9.0E-06 TGCCATAAAAT 11 CDX2_homeodomain_DBD_monomeric_9_1 SELEX - 78010108 78010116 8.0E-06 GCCATAAAA 9 CDX1_homeodomain_DBD_monomeric_9_1 SELEX - 78010108 78010116 8.0E-06 GCCATAAAA 9 RREB1_MA0073.1 JASPAR - 78004509 78004528 7.0E-06 CCCCACCCCACCCCCACGGG 20 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX - 78010107 78010117 9.0E-06 TGCCATAAAAT 11 V_DMRT4_01_M01149 TRANSFAC + 78010091 78010103 1.0E-06 AATGTATCAGAAT 13 V_HOXA9_01_M01351 TRANSFAC - 78010103 78010119 3.0E-06 TCTGCCATAAAATCACA 17 V_CDP_03_M01342 TRANSFAC - 78007905 78007921 6.0E-06 AACAGATGATTAAGATA 17 V_ISL1_Q6_M01127 TRANSFAC + 78005728 78005736 4.0E-06 GGGTAATAT 9 V_NRSF_Q4_M01028 TRANSFAC + 78005350 78005368 9.0E-06 GGGCTGCTCCCGGTGCTGC 19 V_DMRT3_01_M01148 TRANSFAC - 78010089 78010103 6.0E-06 ATTCTGATACATTCA 15 V_SP1_Q6_01_M00931 TRANSFAC - 78005478 78005487 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC - 78005483 78005492 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC - 78005529 78005538 4.0E-06 GGGGCGGGGC 10 V_NFMUE1_Q6_M00651 TRANSFAC + 78010302 78010310 6.0E-06 CGGCCATCT 9 V_CEBP_C_M00201 TRANSFAC + 78007763 78007780 4.0E-06 AGTGTGGTGTAAGGCCCA 18 V_GLI1_Q2_M01042 TRANSFAC - 78010285 78010294 6.0E-06 GACCACCAAG 10 V_AP4_Q6_M00176 TRANSFAC - 78008009 78008018 5.0E-06 CTCAGCTGGA 10 V_POU3F2_02_M00464 TRANSFAC + 78007904 78007913 2.0E-06 TTATCTTAAT 10 V_CUX1_03_M02958 TRANSFAC - 78007905 78007921 6.0E-06 AACAGATGATTAAGATA 17 V_SP1_03_M02281 TRANSFAC + 78005484 78005493 7.0E-06 CCCCGCCCCC 10 V_NKX24_01_M01350 TRANSFAC - 78007686 78007701 2.0E-06 AGGGCTACTTGAAATT 16 V_SP1_02_M01303 TRANSFAC + 78004462 78004472 8.0E-06 GGGGCGGGGGC 11 V_SP1_02_M01303 TRANSFAC + 78004515 78004525 5.0E-06 GGGGTGGGGTG 11 V_SP1_02_M01303 TRANSFAC + 78004520 78004530 5.0E-06 GGGGTGGGGTG 11 V_DLX5_01_M01388 TRANSFAC - 78004278 78004293 6.0E-06 TGGGTAATTGGCTGGT 16 V_BARBIE_01_M00238 TRANSFAC + 78007953 78007967 1.0E-05 GGCAAAAGCAGGAGG 15 V_WT1_Q6_01_M02036 TRANSFAC - 78004464 78004473 4.0E-06 CGCCCCCGCC 10 V_ZNF219_01_M01122 TRANSFAC - 78004495 78004506 8.0E-06 CGCCCCCACCCC 12 V_OCT1_02_M00136 TRANSFAC + 78005729 78005743 9.0E-06 GGTAATATTCAAGTG 15 V_NKX26_01_M01322 TRANSFAC - 78007686 78007701 8.0E-06 AGGGCTACTTGAAATT 16 V_KROX_Q6_M00982 TRANSFAC - 78004462 78004475 0.0E+00 CGCGCCCCCGCCCC 14 V_KROX_Q6_M00982 TRANSFAC - 78004495 78004508 1.0E-06 CGCGCCCCCACCCC 14 V_KROX_Q6_M00982 TRANSFAC + 78005485 78005498 5.0E-06 CCCGCCCCCGAGCC 14 V_SP1_Q6_M00196 TRANSFAC - 78005477 78005489 7.0E-06 GCGGGGCGGGGCG 13 V_SP1_Q6_M00196 TRANSFAC - 78005482 78005494 2.0E-06 CGGGGGCGGGGCG 13 V_SP1_Q6_M00196 TRANSFAC - 78005528 78005540 5.0E-06 GCGGGGCGGGGCT 13 V_MAZ_Q6_01_M02023 TRANSFAC + 78004514 78004527 4.0E-06 GGGGGTGGGGTGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC + 78004977 78004990 5.0E-06 GGGGGCGGGAAGGA 14 V_NKX22_02_M01372 TRANSFAC - 78007685 78007701 3.0E-06 AGGGCTACTTGAAATTC 17 V_TATA_C_M00216 TRANSFAC - 78007657 78007666 5.0E-06 CCTTTAAAAG 10 V_HBP1_03_M02762 TRANSFAC - 78010146 78010161 4.0E-06 CTGATGAATGGATGCT 16 V_SOX12_04_M02900 TRANSFAC + 78007555 78007570 6.0E-06 GCAGGGACAAAGGAGT 16 V_MUSCLE_INI_B_M00321 TRANSFAC - 78004489 78004509 3.0E-06 GCGCGCCCCCACCCCAGACTC 21 V_DAX1_01_M01248 TRANSFAC + 78005193 78005212 8.0E-06 GAATCGCAAGGTCTGAGACT 20 V_RREB1_01_M00257 TRANSFAC - 78004515 78004528 1.0E-06 CCCCACCCCACCCC 14 V_PBX1_05_M01967 TRANSFAC + 78007933 78007946 1.0E-06 CTTGATTGGCATGA 14 V_STAT4_Q5_M02117 TRANSFAC + 78007660 78007669 2.0E-06 TTAAAGGAAA 10 V_SP1_01_M00008 TRANSFAC - 78005560 78005569 1.0E-05 GGGGCGTGGT 10 V_CTCF_02_M01259 TRANSFAC + 78009722 78009741 4.0E-06 GCTCTTTCAGCAGATGGCAC 20 V_PAX8_B_M00328 TRANSFAC - 78001871 78001888 3.0E-06 TCAGTATTGCGTCAATTC 18 V_FOXM1_01_M00630 TRANSFAC + 78009705 78009713 7.0E-06 AAATTGACT 9 V_SP4_Q5_M01273 TRANSFAC + 78005478 78005488 2.0E-06 GCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC + 78005483 78005493 1.0E-06 GCCCCGCCCCC 11 V_SP4_Q5_M01273 TRANSFAC + 78005529 78005539 2.0E-06 GCCCCGCCCCG 11 V_ELF1_Q6_M00746 TRANSFAC - 78010256 78010267 3.0E-06 ACAAGAGGAAAA 12 V_NFYC_Q5_M02107 TRANSFAC + 78004280 78004293 6.0E-06 CAGCCAATTACCCA 14 V_NKX25_03_M01414 TRANSFAC - 78007686 78007701 2.0E-06 AGGGCTACTTGAAATT 16 V_NCX_01_M00484 TRANSFAC - 78004283 78004292 8.0E-06 GGGTAATTGG 10 V_STAT6_02_M00500 TRANSFAC + 78010229 78010236 1.0E-05 GATTTCCT 8 V_ZFP281_01_M01597 TRANSFAC + 78004513 78004523 1.0E-06 TGGGGGTGGGG 11 V_MEF3_B_M00319 TRANSFAC + 78010126 78010138 5.0E-06 TGGTCAGTTTTCA 13 V_OCT1_06_M00162 TRANSFAC + 78010098 78010111 8.0E-06 CAGAATGTGATTTT 14 V_DMRT2_01_M01147 TRANSFAC - 78010089 78010104 8.0E-06 CATTCTGATACATTCA 16 V_GLI_Q2_M01037 TRANSFAC + 78010284 78010295 3.0E-06 TCTTGGTGGTCC 12 V_SP1_Q2_01_M00933 TRANSFAC + 78005484 78005493 4.0E-06 CCCCGCCCCC 10 V_SP1_Q4_01_M00932 TRANSFAC - 78005482 78005494 3.0E-06 CGGGGGCGGGGCG 13 V_SP1_Q4_01_M00932 TRANSFAC - 78005528 78005540 9.0E-06 GCGGGGCGGGGCT 13 V_HOXD10_01_M01375 TRANSFAC - 78007539 78007555 1.0E-05 CATTTCTTAAAATGTGA 17 V_DEC_Q1_M00997 TRANSFAC + 78005735 78005747 8.0E-06 ATTCAAGTGAAGA 13 V_ARID5A_04_M02840 TRANSFAC - 78010228 78010244 4.0E-06 CATCTAATAGGAAATCA 17 V_PAX6_01_M00097 TRANSFAC + 78009692 78009712 3.0E-06 AAGCTTCATGCCTAAATTGAC 21 V_NANOG_02_M01247 TRANSFAC - 78005713 78005732 3.0E-06 TACCCAAAACAATGGCAAAA 20 V_NKX21_01_M01312 TRANSFAC - 78007686 78007701 2.0E-06 AGGGCTACTTGAAATT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.