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PGBD1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
84547 piggyBac transposable element derived 1 chr6 +28244313 - 28249813 28249313

Transcription Factor Binding Sites

 
Download all TFBS in the PGBD1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 28249523 28249540 0.0E+00 TCCATTAACCAACAATTA 18
NFIA_NFI_full_dimeric_15_1 SELEX + 28250961 28250975 5.0E-06 ATGGCAGTGAGCCAA 15
NFIA_NFI_full_dimeric_15_1 SELEX - 28250961 28250975 5.0E-06 TTGGCTCACTGCCAT 15
BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 28249524 28249540 0.0E+00 CCATTAACCAACAATTA 17
ZNF713_C2H2_full_monomeric_17_1 SELEX - 28249799 28249815 3.0E-06 TAGAAAACTGCACCCAA 17
SOX2_HMG_full_dimeric_17_1 SELEX + 28250997 28251013 6.0E-06 TTACAATGTCATTTCTG 17
NR2F1_nuclearreceptor_DBD_monomeric_13_1 SELEX - 28250910 28250922 2.0E-06 CAGAGGTCATGTG 13
POU3F4_POU_DBD_monomeric_11_1 SELEX + 28249152 28249162 6.0E-06 TACATAAATTT 11
NFIX_NFI_full_dimeric_15_2 SELEX + 28250961 28250975 4.0E-06 ATGGCAGTGAGCCAA 15
NFIX_NFI_full_dimeric_15_2 SELEX - 28250961 28250975 2.0E-06 TTGGCTCACTGCCAT 15
BARHL2_homeodomain_full_dimeric_16_1 SELEX - 28249525 28249540 1.0E-06 TAATTGTTGGTTAATG 16
Barhl1_homeodomain_DBD_dimeric_16_1 SELEX - 28249525 28249540 1.0E-06 TAATTGTTGGTTAATG 16
NFATC1_NFAT_full_dimeric_14_1 SELEX + 28249809 28249822 1.0E-06 TTTTCTATGGGAAT 14
NFATC1_NFAT_full_dimeric_14_1 SELEX - 28249809 28249822 1.0E-06 ATTCCCATAGAAAA 14
Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 28249523 28249540 0.0E+00 TCCATTAACCAACAATTA 18
NFIB_NFI_full_dimeric_15_1 SELEX + 28250961 28250975 6.0E-06 ATGGCAGTGAGCCAA 15
NFIB_NFI_full_dimeric_15_1 SELEX - 28250961 28250975 5.0E-06 TTGGCTCACTGCCAT 15
Sox3_HMG_DBD_dimeric_17_1 SELEX - 28250997 28251013 6.0E-06 CAGAAATGACATTGTAA 17
MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 28249523 28249540 0.0E+00 TCCATTAACCAACAATTA 18
V_STAT5A_Q6_M01890 TRANSFAC + 28250603 28250615 6.0E-06 AGTCTTCTTGGAA 13
V_FOXA2_04_M02749 TRANSFAC + 28249146 28249162 9.0E-06 ATGATGTACATAAATTT 17
V_NF1_Q6_01_M00806 TRANSFAC + 28250961 28250977 6.0E-06 ATGGCAGTGAGCCAAGA 17
V_PAX4_03_M00378 TRANSFAC - 28249751 28249762 7.0E-06 CATCCCCACCCG 12
V_NKX29_01_M01352 TRANSFAC - 28249972 28249988 1.0E-06 TGCTAAGTACTCAATTT 17
V_EBOX_Q6_01_M01034 TRANSFAC + 28250909 28250918 8.0E-06 CCACATGACC 10
V_AP4_Q6_02_M01860 TRANSFAC + 28250539 28250551 1.0E-06 ACAGCTGCTGGCA 13
V_CEBPE_Q6_M01868 TRANSFAC - 28250510 28250523 7.0E-06 TATAATTTCAACAG 14
V_ZFP105_03_M02827 TRANSFAC + 28249526 28249540 2.0E-06 ATTAACCAACAATTA 15
V_IK1_01_M00086 TRANSFAC + 28249813 28249825 2.0E-06 CTATGGGAATACC 13
V_STAT5A_02_M00460 TRANSFAC + 28250607 28250630 9.0E-06 TTCTTGGAACAGAGATATATTGAA 24
V_IK2_01_M00087 TRANSFAC + 28249813 28249824 8.0E-06 CTATGGGAATAC 12
V_ERR1_Q3_M01841 TRANSFAC - 28250996 28251010 9.0E-06 AAATGACATTGTAAG 15
V_STAT3_03_M01595 TRANSFAC + 28250605 28250620 8.0E-06 TCTTCTTGGAACAGAG 16
V_NKX23_01_M01457 TRANSFAC + 28249973 28249988 7.0E-06 AATTGAGTACTTAGCA 16
V_NKX23_01_M01457 TRANSFAC - 28249973 28249988 2.0E-06 TGCTAAGTACTCAATT 16
V_NKX3A_02_M01383 TRANSFAC - 28249972 28249988 0.0E+00 TGCTAAGTACTCAATTT 17
V_NKX3A_02_M01383 TRANSFAC + 28249973 28249989 2.0E-06 AATTGAGTACTTAGCAT 17
V_CTF1_01_M01196 TRANSFAC - 28250961 28250974 9.0E-06 TGGCTCACTGCCAT 14
V_CTF1_01_M01196 TRANSFAC + 28250962 28250975 0.0E+00 TGGCAGTGAGCCAA 14
V_TCF11MAFG_01_M00284 TRANSFAC - 28250992 28251013 7.0E-06 CAGAAATGACATTGTAAGAGAG 22
TLX1_NFIC_MA0119.1 JASPAR - 28250961 28250974 9.0E-06 TGGCTCACTGCCAT 14
TLX1_NFIC_MA0119.1 JASPAR + 28250962 28250975 0.0E+00 TGGCAGTGAGCCAA 14
V_ARID5A_04_M02840 TRANSFAC + 28249773 28249789 6.0E-06 TCTGTAATACGAGATGG 17
V_STAT1_05_M01260 TRANSFAC + 28250604 28250625 5.0E-06 GTCTTCTTGGAACAGAGATATA 22
V_NF1_Q6_M00193 TRANSFAC - 28250960 28250977 4.0E-06 TCTTGGCTCACTGCCATA 18
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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