Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

MCM8 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 84515 minichromosome maintenance complex component 8 chr20 + 5926297 - 5931797 5931297 Transcription Factor Binding Sites   Download all TFBS in the MCM8 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NEUROD2_bHLH_full_dimeric_10_1 SELEX + 5926720 5926729 1.0E-05 ACCATATGCT 10 ZNF306_C2H2_full_monomeric_14_1 SELEX - 5926871 5926884 5.0E-06 TGAGATAACCTGGA 14 POU3F3_POU_DBD_monomeric_12_1 SELEX + 5926600 5926611 8.0E-06 TTACATATATAA 12 POU3F2_POU_DBD_monomeric_13_1 SELEX + 5926599 5926611 4.0E-06 TTTACATATATAA 13 TEF_bZIP_DBD_dimeric_12_1 SELEX + 5926744 5926755 2.0E-06 TGTTACATAACT 12 TEF_bZIP_DBD_dimeric_12_1 SELEX - 5926744 5926755 5.0E-06 AGTTATGTAACA 12 HLF_bZIP_full_dimeric_12_1 SELEX + 5926744 5926755 2.0E-06 TGTTACATAACT 12 HLF_bZIP_full_dimeric_12_1 SELEX - 5926744 5926755 5.0E-06 AGTTATGTAACA 12 EWSR1-FLI1_MA0149.1 JASPAR + 5931570 5931587 5.0E-06 GGGAGGGAGGGAGGGAGA 18 EWSR1-FLI1_MA0149.1 JASPAR + 5931571 5931588 9.0E-06 GGAGGGAGGGAGGGAGAA 18 POU1F1_POU_DBD_monomeric_14_1 SELEX - 5926595 5926608 2.0E-06 TATATGTAAAATAG 14 NFIL3_MA0025.1 JASPAR - 5926743 5926753 3.0E-06 TTATGTAACAG 11 POU2F2_POU_DBD_monomeric_11_1 SELEX - 5926597 5926607 6.0E-06 ATATGTAAAAT 11 DBP_bZIP_full_dimeric_12_1 SELEX + 5926744 5926755 4.0E-06 TGTTACATAACT 12 DBP_bZIP_full_dimeric_12_1 SELEX - 5926744 5926755 2.0E-06 AGTTATGTAACA 12 SCRT2_C2H2_DBD_monomeric_13_1 SELEX - 5931169 5931181 8.0E-06 GTGCAACACGTGG 13 IRF7_IRF_DBD_trimeric_17_1 SELEX - 5931348 5931364 3.0E-06 CAAGCGAAAATCAGGTC 17 SPIB_ETS_DBD_monomeric_14_1 SELEX - 5931184 5931197 4.0E-06 GGAAAGCGGAAGCG 14 OTX2_homeodomain_DBD_dimeric_15_1 SELEX - 5926807 5926821 5.0E-06 TTTAATCCTATGAGT 15 POU3F3_POU_DBD_monomeric_13_1 SELEX - 5926596 5926608 4.0E-06 TATATGTAAAATA 13 BHLHE23_bHLH_DBD_dimeric_10_1 SELEX - 5926720 5926729 9.0E-06 AGCATATGGT 10 BHLHE22_bHLH_DBD_dimeric_12_1 SELEX + 5926719 5926730 5.0E-06 CACCATATGCTA 12 BHLHE22_bHLH_DBD_dimeric_12_1 SELEX - 5926719 5926730 5.0E-06 TAGCATATGGTG 12 OTX2_homeodomain_DBD_monomeric_8_1 SELEX - 5926813 5926820 7.0E-06 TTAATCCT 8 SP1_MA0079.2 JASPAR + 5931088 5931097 9.0E-06 CCCCTCCTCC 10 Creb3l2_bZIP_DBD_dimeric_13_1 SELEX + 5928077 5928089 9.0E-06 TGCCACATCACCC 13 BARHL2_homeodomain_full_monomeric_10_1 SELEX - 5926843 5926852 5.0E-06 ATTAAATGGT 10 OLIG1_bHLH_DBD_dimeric_10_1 SELEX + 5926720 5926729 4.0E-06 ACCATATGCT 10 OLIG1_bHLH_DBD_dimeric_10_1 SELEX - 5926720 5926729 5.0E-06 AGCATATGGT 10 NFATC1_NFAT_full_dimeric_20_1 SELEX + 5931414 5931433 2.0E-06 TGGGGAAACTGAGTTTCCCG 20 NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX - 5926701 5926716 5.0E-06 GAGGTTAAGAGGTCTG 16 NFIL3_bZIP_DBD_dimeric_12_1 SELEX + 5926744 5926755 2.0E-06 TGTTACATAACT 12 POU3F1_POU_DBD_monomeric_12_1 SELEX - 5926596 5926607 3.0E-06 ATATGTAAAATA 12 PITX1_homeodomain_full_monomeric_9_1 SELEX - 5926813 5926821 2.0E-06 TTTAATCCT 9 Atoh1_bHLH_DBD_dimeric_10_1 SELEX + 5926720 5926729 1.0E-05 ACCATATGCT 10 Hltf_MA0109.1 JASPAR - 5926606 5926615 2.0E-06 ATCCTTATAT 10 TFAP4_bHLH_full_dimeric_10_1 SELEX + 5926738 5926747 9.0E-06 CACAGCTGTT 10 POU2F1_POU_DBD_monomeric_12_1 SELEX - 5926597 5926608 6.0E-06 TATATGTAAAAT 12 HLF_MA0043.1 JASPAR + 5926744 5926755 6.0E-06 TGTTACATAACT 12 ETV6_ETS_full_monomeric_10_1 SELEX + 5931303 5931312 6.0E-06 AGCGGAAGTT 10 SPI1_ETS_full_monomeric_14_1 SELEX - 5931184 5931197 4.0E-06 GGAAAGCGGAAGCG 14 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX - 5926702 5926716 1.0E-06 GAGGTTAAGAGGTCT 15 ETV6_ETS_full_dimeric_15_1 SELEX - 5931184 5931198 2.0E-06 CGGAAAGCGGAAGCG 15 POU3F2_POU_DBD_monomeric_12_1 SELEX - 5926596 5926607 4.0E-06 ATATGTAAAATA 12 ELF5_MA0136.1 JASPAR - 5926610 5926618 9.0E-06 TATATCCTT 9 RARG_nuclearreceptor_full_dimeric_16_1 SELEX - 5926701 5926716 1.0E-05 GAGGTTAAGAGGTCTG 16 MSC_bHLH_full_dimeric_10_1 SELEX - 5926738 5926747 9.0E-06 AACAGCTGTG 10 BHLHA15_bHLH_DBD_dimeric_10_1 SELEX + 5926720 5926729 4.0E-06 ACCATATGCT 10 NFE2L2_MA0150.1 JASPAR + 5926793 5926803 7.0E-06 ATGACGCAGCA 11 OLIG2_bHLH_full_dimeric_10_1 SELEX + 5926720 5926729 3.0E-06 ACCATATGCT 10 OLIG2_bHLH_full_dimeric_10_1 SELEX - 5926720 5926729 9.0E-06 AGCATATGGT 10 OLIG3_bHLH_DBD_dimeric_10_1 SELEX + 5926720 5926729 3.0E-06 ACCATATGCT 10 V_RUSH1A_02_M01107 TRANSFAC - 5926606 5926615 2.0E-06 ATCCTTATAT 10 V_SPI1_01_M01203 TRANSFAC - 5931181 5931197 8.0E-06 GGAAAGCGGAAGCGGCG 17 V_AR_02_M00953 TRANSFAC + 5926768 5926794 2.0E-06 AAGAACTTTACATTATGTTCTTGCAAT 27 V_NRSF_Q4_M01028 TRANSFAC + 5926904 5926922 4.0E-06 CTTCACTCCACTGAGCTGC 19 V_DMRT3_01_M01148 TRANSFAC - 5928292 5928306 8.0E-06 TGTCTGTTACATTCT 15 V_MTF1_Q4_M00650 TRANSFAC + 5931262 5931275 9.0E-06 GCTGCACTCCGCCC 14 V_DEAF1_02_M01002 TRANSFAC + 5930989 5931013 0.0E+00 GCGGATGCGGTGGTCTCCGGGATGC 25 V_SATB1_Q3_M01723 TRANSFAC + 5926604 5926619 6.0E-06 ATATATAAGGATATAA 16 V_AR_Q6_01_M01996 TRANSFAC + 5926775 5926789 0.0E+00 TTACATTATGTTCTT 15 V_SP1_Q6_01_M00931 TRANSFAC - 5931272 5931281 4.0E-06 GGGGCGGGGC 10 V_OCT1_Q5_01_M00930 TRANSFAC + 5926596 5926606 6.0E-06 TATTTTACATA 11 V_EGR_Q6_M00807 TRANSFAC + 5930884 5930894 6.0E-06 GTGGGGGCGGG 11 V_HNF4ALPHA_Q6_M00638 TRANSFAC + 5926768 5926780 1.0E-05 AAGAACTTTACAT 13 V_OCT1_01_M00135 TRANSFAC - 5926593 5926611 7.0E-06 TTATATATGTAAAATAGGG 19 V_AP4_Q6_M00176 TRANSFAC + 5926738 5926747 8.0E-06 CACAGCTGTT 10 V_SP1_03_M02281 TRANSFAC + 5931088 5931097 9.0E-06 CCCCTCCTCC 10 V_AR_03_M00956 TRANSFAC + 5926768 5926794 5.0E-06 AAGAACTTTACATTATGTTCTTGCAAT 27 V_E2_Q6_M00181 TRANSFAC - 5928137 5928152 4.0E-06 GAACCAATAAAGGTGA 16 V_NFY_C_M00209 TRANSFAC + 5931254 5931267 1.0E-06 CTTGATTGGCTGCA 14 V_SPIC_01_M02042 TRANSFAC + 5931303 5931312 9.0E-06 AGCGGAAGTT 10 V_GC_01_M00255 TRANSFAC - 5931270 5931283 9.0E-06 GAGGGGCGGGGCGG 14 V_FOXA2_02_M02853 TRANSFAC - 5928251 5928265 3.0E-06 GCAAATAACAAGAAT 15 V_DBP_Q6_01_M01872 TRANSFAC - 5926746 5926753 5.0E-06 TTATGTAA 8 V_PR_01_M00954 TRANSFAC + 5926768 5926794 3.0E-06 AAGAACTTTACATTATGTTCTTGCAAT 27 V_ZFP105_03_M02827 TRANSFAC - 5928252 5928266 0.0E+00 AGCAAATAACAAGAA 15 V_TCFAP2C_03_M02821 TRANSFAC - 5931357 5931371 7.0E-06 AATGCCTCAAGCGAA 15 V_E4BP4_01_M00045 TRANSFAC - 5926744 5926755 0.0E+00 AGTTATGTAACA 12 V_DOBOX4_01_M01359 TRANSFAC - 5930867 5930883 7.0E-06 CTTGTAGATACCCCCTC 17 V_IRX4_01_M01410 TRANSFAC - 5926596 5926612 4.0E-06 CTTATATATGTAAAATA 17 V_SP1_Q6_M00196 TRANSFAC - 5931271 5931283 2.0E-06 GAGGGGCGGGGCG 13 V_FOXK1_04_M02856 TRANSFAC - 5928250 5928264 1.0E-05 CAAATAACAAGAATT 15 V_IRF3_Q3_M01279 TRANSFAC + 5931352 5931364 4.0E-06 TGATTTTCGCTTG 13 V_E47_02_M00071 TRANSFAC + 5926735 5926750 8.0E-06 CCTCACAGCTGTTACA 16 V_MAZ_Q6_01_M02023 TRANSFAC - 5931084 5931097 1.0E-05 GGAGGAGGGGCGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC + 5931572 5931585 3.0E-06 GAGGGAGGGAGGGA 14 V_PAX5_01_M00143 TRANSFAC - 5926897 5926924 8.0E-06 CTGCAGCTCAGTGGAGTGAAGCAAGTAC 28 V_HOXD11_01_M01434 TRANSFAC - 5926581 5926597 1.0E-06 TAGGGTCATAAACACAT 17 V_SFPI1_04_M02896 TRANSFAC - 5928148 5928161 1.0E-06 CGATTTAGGGAACC 14 V_ELF5_01_M01197 TRANSFAC + 5926608 5926618 1.0E-06 ATAAGGATATA 11 V_CDX1_01_M01373 TRANSFAC - 5926582 5926597 6.0E-06 TAGGGTCATAAACACA 16 V_GR_01_M00955 TRANSFAC + 5926768 5926794 4.0E-06 AAGAACTTTACATTATGTTCTTGCAAT 27 V_AP4_Q5_M00175 TRANSFAC + 5926738 5926747 8.0E-06 CACAGCTGTT 10 V_HOXC12_01_M01437 TRANSFAC - 5926581 5926597 2.0E-06 TAGGGTCATAAACACAT 17 V_GR_Q6_M00192 TRANSFAC + 5926772 5926790 1.0E-06 ACTTTACATTATGTTCTTG 19 V_GRE_C_M00205 TRANSFAC + 5926774 5926789 0.0E+00 TTTACATTATGTTCTT 16 V_KLF7_03_M02773 TRANSFAC + 5931269 5931284 5.0E-06 TCCGCCCCGCCCCTCT 16 V_POU6F1_01_M00465 TRANSFAC + 5926489 5926499 5.0E-06 GCTAAAATTAT 11 V_IRX3_01_M01318 TRANSFAC - 5926596 5926612 6.0E-06 CTTATATATGTAAAATA 17 V_OCT_Q6_M00795 TRANSFAC + 5926596 5926606 6.0E-06 TATTTTACATA 11 V_IRX5_01_M01472 TRANSFAC - 5926596 5926612 4.0E-06 CTTATATATGTAAAATA 17 V_CETS1P54_03_M01078 TRANSFAC + 5931300 5931315 5.0E-06 TTGAGCGGAAGTTGGA 16 V_GR_Q6_02_M01836 TRANSFAC + 5926778 5926790 0.0E+00 CATTATGTTCTTG 13 V_SP4_Q5_M01273 TRANSFAC + 5931272 5931282 8.0E-06 GCCCCGCCCCT 11 V_GCNF_01_M00526 TRANSFAC - 5926671 5926688 4.0E-06 GCTAAGTTCAATTTCTAC 18 V_CAAT_01_M00254 TRANSFAC - 5931256 5931267 3.0E-06 TGCAGCCAATCA 12 V_MTF1_06_M02882 TRANSFAC - 5926596 5926609 3.0E-06 ATATATGTAAAATA 14 V_E2_01_M00107 TRANSFAC - 5928137 5928152 3.0E-06 GAACCAATAAAGGTGA 16 V_HAND1E47_01_M00222 TRANSFAC - 5926696 5926711 3.0E-06 TAAGAGGTCTGGTTTT 16 V_SMAD4_04_M02898 TRANSFAC + 5931269 5931285 2.0E-06 TCCGCCCCGCCCCTCTC 17 V_BARHL1_01_M01332 TRANSFAC + 5926839 5926854 1.0E-05 GAGAACCATTTAATGG 16 V_OCT1_Q6_M00195 TRANSFAC - 5926595 5926609 6.0E-06 ATATATGTAAAATAG 15 V_EBNA1_01_M01745 TRANSFAC + 5928065 5928080 1.0E-06 GACAGAATATACTGCC 16 V_DMRT7_01_M01151 TRANSFAC + 5931362 5931375 1.0E-05 TTGAGGCATTTTTG 14 V_OCT1_06_M00162 TRANSFAC + 5926595 5926608 3.0E-06 CTATTTTACATATA 14 V_IRX2_01_M01405 TRANSFAC - 5926596 5926612 9.0E-06 CTTATATATGTAAAATA 17 V_TCFAP2A_03_M02819 TRANSFAC - 5931357 5931371 4.0E-06 AATGCCTCAAGCGAA 15 V_EWSR1FLI1_01_M02252 TRANSFAC + 5931570 5931587 5.0E-06 GGGAGGGAGGGAGGGAGA 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 5931571 5931588 9.0E-06 GGAGGGAGGGAGGGAGAA 18 V_HLF_01_M00260 TRANSFAC + 5926745 5926754 7.0E-06 GTTACATAAC 10 V_FOXO1_01_M00473 TRANSFAC - 5926582 5926591 9.0E-06 CATAAACACA 10 V_PR_02_M00957 TRANSFAC + 5926768 5926794 3.0E-06 AAGAACTTTACATTATGTTCTTGCAAT 27 V_HNF3B_Q6_M02014 TRANSFAC + 5928258 5928266 1.0E-05 TTATTTGCT 9 V_SP1_Q2_01_M00933 TRANSFAC + 5931273 5931282 7.0E-06 CCCCGCCCCT 10 V_NFE2L2_01_M02263 TRANSFAC + 5926793 5926803 7.0E-06 ATGACGCAGCA 11 V_FOXO4_01_M00472 TRANSFAC - 5926580 5926590 8.0E-06 ATAAACACATT 11 V_ELF5_04_M02241 TRANSFAC - 5926610 5926618 9.0E-06 TATATCCTT 9 V_BRN3C_01_M01408 TRANSFAC - 5928180 5928195 7.0E-06 AAGCTTTAATGAAGAT 16 V_LPOLYA_B_M00318 TRANSFAC - 5928141 5928148 7.0E-06 CAATAAAG 8 V_ZFP128_04_M02932 TRANSFAC + 5926599 5926612 4.0E-06 TTTACATATATAAG 14 V_NFYA_Q5_M02106 TRANSFAC - 5931252 5931265 4.0E-06 CAGCCAATCAAGGA 14 V_SP1_Q4_01_M00932 TRANSFAC - 5931271 5931283 4.0E-06 GAGGGGCGGGGCG 13 V_TCF11MAFG_01_M00284 TRANSFAC + 5926788 5926809 8.0E-06 TTGCAATGACGCAGCAACGACT 22 V_IRXB3_01_M01377 TRANSFAC - 5926596 5926612 6.0E-06 CTTATATATGTAAAATA 17 V_COUP_DR1_Q6_M00765 TRANSFAC + 5931651 5931663 8.0E-06 GGACCTCTGTCCC 13 V_DTYPEPA_B_M00334 TRANSFAC - 5926846 5926855 1.0E-06 ACCATTAAAT 10 V_BRCA_01_M01082 TRANSFAC - 5928288 5928295 1.0E-05 TTCTGTTG 8 V_PAX4_04_M00380 TRANSFAC + 5926473 5926502 1.0E-05 AATAATAATAGTAATAGCTAAAATTATGGG 30 V_OCT4_01_M01125 TRANSFAC - 5926598 5926612 7.0E-06 CTTATATATGTAAAA 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.