Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

HHIPL1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 84439 HHIP-like 1 chr14 + 100106479 - 100111979 100111479 Transcription Factor Binding Sites   Download all TFBS in the HHIPL1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 100114590 100114607 4.0E-06 TCAGTAAATAATGAGCTA 18 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 100114596 100114607 9.0E-06 TCAGTAAATAAT 12 TBX5_TBX_DBD_dimeric_20_1 SELEX + 100113888 100113907 7.0E-06 AGGAGTGACCACTAACACTT 20 ESR1_MA0112.2 JASPAR + 100113849 100113868 7.0E-06 TTCCCAGGACAGCCTGGCTT 20 HSF4_HSF_DBD_trimeric_13_1 SELEX - 100114506 100114518 8.0E-06 TTCTGGCACCTTC 13 MAFK_bZIP_DBD_dimeric_21_1 SELEX + 100115716 100115736 5.0E-06 ATGTTGCTGACTAATCTGGAA 21 LHX9_homeodomain_DBD_dimeric_13_1 SELEX + 100114587 100114599 5.0E-06 TGATAGCTCATTA 13 MAFG_bZIP_full_dimeric_21_1 SELEX + 100115716 100115736 7.0E-06 ATGTTGCTGACTAATCTGGAA 21 MAFK_bZIP_full_monomeric_12_1 SELEX + 100115715 100115726 7.0E-06 AATGTTGCTGAC 12 V_IPF1_02_M01234 TRANSFAC - 100114593 100114602 5.0E-06 AAATAATGAG 10 V_MAFK_03_M02776 TRANSFAC + 100115714 100115728 4.0E-06 AAATGTTGCTGACTA 15 V_YY1_02_M00069 TRANSFAC - 100115660 100115679 2.0E-06 CAGGCACCATCTTGGTTCCA 20 V_FOXA2_04_M02749 TRANSFAC - 100114593 100114609 7.0E-06 GTTCAGTAAATAATGAG 17 V_NF1_Q6_01_M00806 TRANSFAC - 100115791 100115807 4.0E-06 AAGGCCACGTGCCAAGA 17 V_ESR1_01_M02261 TRANSFAC + 100113849 100113868 7.0E-06 TTCCCAGGACAGCCTGGCTT 20 V_EVI1_04_M00081 TRANSFAC - 100109381 100109395 3.0E-06 AAAAAAGAAAAAAAA 15 V_MAFB_05_M02775 TRANSFAC + 100115715 100115731 1.0E-06 AATGTTGCTGACTAATC 17 V_SATB1_Q3_M01723 TRANSFAC - 100114589 100114604 9.0E-06 GTAAATAATGAGCTAT 16 V_MEF2_02_M00231 TRANSFAC - 100109296 100109317 8.0E-06 CATGGAATTTAAAATAACTATG 22 V_IRF_Q6_01_M00972 TRANSFAC - 100109385 100109395 6.0E-06 AAAAAAGAAAA 11 V_IRF2_Q6_M01882 TRANSFAC - 100109382 100109397 5.0E-06 TCAAAAAAGAAAAAAA 16 V_HNF3_Q6_01_M01012 TRANSFAC - 100114602 100114619 4.0E-06 GTATGTGTTTGTTCAGTA 18 V_PU1_Q4_M01172 TRANSFAC + 100115812 100115830 1.0E-06 AAGTCTCAGTTCCTCATCT 19 V_HOXD13_01_M01404 TRANSFAC + 100115825 100115840 9.0E-06 TCATCTATAAAATAGG 16 V_TCFAP2E_04_M02926 TRANSFAC - 100109379 100109392 1.0E-06 AAAGAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 100109380 100109393 1.0E-06 AAAAGAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 100109381 100109394 0.0E+00 AAAAAGAAAAAAAA 14 V_MEF2A_Q6_M02024 TRANSFAC + 100109302 100109311 7.0E-06 TATTTTAAAT 10 V_ELF4_04_M02850 TRANSFAC - 100109383 100109399 7.0E-06 TCTCAAAAAAGAAAAAA 17 V_PR_Q2_M00960 TRANSFAC + 100115734 100115743 3.0E-06 GAAAGAACAC 10 V_FREAC3_01_M00291 TRANSFAC - 100114594 100114609 0.0E+00 GTTCAGTAAATAATGA 16 V_ZFP105_03_M02827 TRANSFAC - 100109381 100109395 7.0E-06 AAAAAAGAAAAAAAA 15 V_GATA3_05_M02859 TRANSFAC + 100109247 100109268 7.0E-06 TGGTCTTGATGTTGTCAACTTT 22 V_OLF1_01_M00261 TRANSFAC + 100114515 100114536 1.0E-06 AGAAATTCCTCAAGGAGTGTAG 22 V_HNF3_Q6_M00791 TRANSFAC + 100114604 100114616 2.0E-06 CTGAACAAACACA 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 100114604 100114614 5.0E-06 TGTTTGTTCAG 11 V_IRF_Q6_M00772 TRANSFAC + 100109381 100109395 2.0E-06 TTTTTTTTCTTTTTT 15 V_MEF2_03_M00232 TRANSFAC - 100109296 100109317 7.0E-06 CATGGAATTTAAAATAACTATG 22 V_TATA_C_M00216 TRANSFAC + 100115828 100115837 3.0E-06 TCTATAAAAT 10 V_ELF5_01_M01197 TRANSFAC + 100109734 100109744 7.0E-06 ATCAGGATGTA 11 V_XFD2_01_M00268 TRANSFAC - 100114594 100114607 9.0E-06 TCAGTAAATAATGA 14 V_MEF2_Q6_01_M00941 TRANSFAC + 100109299 100109310 1.0E-06 AGTTATTTTAAA 12 V_MAFK_Q3_M02022 TRANSFAC - 100115719 100115729 7.0E-06 TTAGTCAGCAA 11 V_KAISO_01_M01119 TRANSFAC - 100113883 100113892 4.0E-06 CTCCTGCTAA 10 V_ALPHACP1_01_M00687 TRANSFAC + 100109728 100109738 3.0E-06 AAGCCAATCAG 11 V_MTF1_06_M02882 TRANSFAC - 100109379 100109392 1.0E-06 AAAGAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC - 100109381 100109394 9.0E-06 AAAAAGAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC - 100109382 100109395 0.0E+00 AAAAAAGAAAAAAA 14 V_T3R_01_M00239 TRANSFAC - 100113924 100113939 5.0E-06 ACATGAGGTCACTCTC 16 V_POU6F1_02_M01462 TRANSFAC - 100114588 100114604 0.0E+00 GTAAATAATGAGCTATC 17 V_FOXL1_02_M02857 TRANSFAC - 100109297 100109312 3.0E-06 AATTTAAAATAACTAT 16 V_FOXL1_04_M02753 TRANSFAC - 100114593 100114609 7.0E-06 GTTCAGTAAATAATGAG 17 V_NKX61_02_M01469 TRANSFAC - 100114590 100114605 2.0E-06 AGTAAATAATGAGCTA 16 V_SMAD3_03_M02794 TRANSFAC - 100109311 100109327 3.0E-06 AATTACCAGACATGGAA 17 V_FOX_Q2_M00809 TRANSFAC + 100114595 100114607 7.0E-06 CATTATTTACTGA 13 V_SRF_06_M02916 TRANSFAC - 100109375 100109391 2.0E-06 AAGAAAAAAAAAAGTCA 17 V_SRF_06_M02916 TRANSFAC - 100109376 100109392 1.0E-06 AAAGAAAAAAAAAAGTC 17 V_SRF_06_M02916 TRANSFAC - 100109377 100109393 2.0E-06 AAAAGAAAAAAAAAAGT 17 V_SRF_06_M02916 TRANSFAC - 100109378 100109394 1.0E-05 AAAAAGAAAAAAAAAAG 17 V_SRF_06_M02916 TRANSFAC - 100109379 100109395 4.0E-06 AAAAAAGAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 100109380 100109396 2.0E-06 CAAAAAAGAAAAAAAAA 17 V_POU6F1_03_M01479 TRANSFAC - 100114588 100114604 1.0E-06 GTAAATAATGAGCTATC 17 V_FOXJ2_01_M00422 TRANSFAC + 100114602 100114619 1.0E-05 TACTGAACAAACACATAC 18 V_HNF3B_Q6_M02014 TRANSFAC + 100114597 100114605 6.0E-06 TTATTTACT 9 V_SOX15_04_M02903 TRANSFAC + 100109301 100109315 1.0E-05 TTATTTTAAATTCCA 15 V_ARP1_01_M00155 TRANSFAC + 100115652 100115667 8.0E-06 TGCGTCTCTGGAACCA 16 V_MEF2A_05_M01301 TRANSFAC + 100109299 100109310 0.0E+00 AGTTATTTTAAA 12 V_HMEF2_Q6_M00406 TRANSFAC - 100109297 100109312 2.0E-06 AATTTAAAATAACTAT 16 V_CMAF_01_M01070 TRANSFAC + 100115715 100115733 3.0E-06 AATGTTGCTGACTAATCTG 19 V_NFYA_Q5_M02106 TRANSFAC + 100109728 100109741 4.0E-06 AAGCCAATCAGGAT 14 V_TCF3_05_M02920 TRANSFAC - 100109378 100109392 1.0E-05 AAAGAAAAAAAAAAG 15 V_TCF3_05_M02920 TRANSFAC - 100109379 100109393 6.0E-06 AAAAGAAAAAAAAAA 15 V_SMAD1_01_M01590 TRANSFAC - 100109383 100109394 3.0E-06 AAAAAGAAAAAA 12 V_NF1_Q6_M00193 TRANSFAC + 100115791 100115808 7.0E-06 TCTTGGCACGTGGCCTTC 18 V_NANOG_02_M01247 TRANSFAC - 100109379 100109398 2.0E-06 CTCAAAAAAGAAAAAAAAAA 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.