Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

CYSTM1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
84418 cysteine-rich transmembrane module containing 1 chr5 +139549652 - 139555152 139554652

Transcription Factor Binding Sites

 
Download all TFBS in the CYSTM1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 139557143 139557160 5.0E-06 TGCGTAAATATAGAAACC 18
LBX2_homeodomain_DBD_dimeric_13_1 SELEX + 139555360 139555372 6.0E-06 CTGGAAGTAACTA 13
FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 139557146 139557158 5.0E-06 GTAAATATAGAAA 13
SOX21_HMG_DBD_dimeric_15_1 SELEX + 139557636 139557650 1.0E-06 AAAAATGTTAGTGTG 15
FOXJ2_forkhead_DBD_monomeric_8_1 SELEX + 139557672 139557679 5.0E-06 ATAAACAA 8
VSX2_homeodomain_DBD_monomeric_8_1 SELEX + 139557456 139557463 5.0E-06 CTAATTAT 8
SRY_HMG_DBD_dimeric_15_1 SELEX - 139557636 139557650 1.0E-06 CACACTAACATTTTT 15
KLF16_C2H2_DBD_monomeric_11_1 SELEX - 139554644 139554654 1.0E-05 GCCCCGCCCCC 11
SOX2_HMG_full_dimeric_17_1 SELEX - 139557635 139557651 0.0E+00 ACACACTAACATTTTTT 17
FOXF2_MA0030.1 JASPAR + 139557667 139557680 8.0E-06 CTATAATAAACAAC 14
FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 139557662 139557678 0.0E+00 ACAAACTATAATAAACA 17
SOX8_HMG_full_dimeric_15_1 SELEX + 139557636 139557650 8.0E-06 AAAAATGTTAGTGTG 15
EWSR1-FLI1_MA0149.1 JASPAR + 139555553 139555570 7.0E-06 GGGGGGAGAGAAGGAGGG 18
EWSR1-FLI1_MA0149.1 JASPAR + 139555557 139555574 7.0E-06 GGAGAGAAGGAGGGGAGG 18
Sox17_HMG_DBD_dimeric_15_1 SELEX - 139557636 139557650 8.0E-06 CACACTAACATTTTT 15
SCRT2_C2H2_DBD_monomeric_13_1 SELEX - 139554238 139554250 7.0E-06 TTGCAACAAGTAG 13
FOXD2_forkhead_DBD_dimeric_14_1 SELEX - 139557635 139557648 7.0E-06 CACTAACATTTTTT 14
Pax4_MA0068.1 JASPAR + 139557397 139557426 5.0E-06 AAAAAATTTAGAAAAGTAACTGTTTTCCAA 30
Pax4_MA0068.1 JASPAR - 139557534 139557563 3.0E-06 GAAAATTTCCAAAAACTTTTGGCCTACTTA 30
Pax4_MA0068.1 JASPAR - 139558173 139558202 6.0E-06 AAAAAATTAAAAAAACCAAATCAGCAAAAA 30
Pax4_MA0068.1 JASPAR - 139558174 139558203 4.0E-06 AAAAAAATTAAAAAAACCAAATCAGCAAAA 30
JDP2_bZIP_full_dimeric_12_1 SELEX - 139554745 139554756 1.0E-05 CCTGACGTCACG 12
Foxq1_MA0040.1 JASPAR - 139557671 139557681 1.0E-06 TGTTGTTTATT 11
SP1_MA0079.2 JASPAR - 139554644 139554653 7.0E-06 CCCCGCCCCC 10
SOX14_HMG_DBD_dimeric_13_1 SELEX - 139557637 139557649 7.0E-06 ACACTAACATTTT 13
znf143_MA0088.1 JASPAR + 139554388 139554407 6.0E-06 GCCGACCCCTCATGCCACGC 20
SP4_C2H2_full_monomeric_17_1 SELEX - 139554641 139554657 8.0E-06 CGAGCCCCGCCCCCAAC 17
SOX15_HMG_full_dimeric_15_1 SELEX - 139557636 139557650 0.0E+00 CACACTAACATTTTT 15
SOX7_HMG_full_dimeric_17_1 SELEX + 139557635 139557651 1.0E-06 AAAAAATGTTAGTGTGT 17
SCRT1_C2H2_DBD_monomeric_15_1 SELEX - 139554236 139554250 5.0E-06 TTGCAACAAGTAGTC 15
SOX14_HMG_DBD_dimeric_12_1 SELEX - 139557638 139557649 1.0E-05 ACACTAACATTT 12
MZF1_5-13_MA0057.1 JASPAR - 139554185 139554194 4.0E-06 GGAGGGGGAA 10
MZF1_5-13_MA0057.1 JASPAR + 139554254 139554263 1.0E-05 TTATGGGGAA 10
NRL_bZIP_DBD_monomeric_11_1 SELEX + 139558173 139558183 8.0E-06 TTTTTGCTGAT 11
ETV6_ETS_full_monomeric_10_1 SELEX + 139555342 139555351 2.0E-06 AGCGGAAGTA 10
Foxj3_forkhead_DBD_monomeric_8_1 SELEX + 139557672 139557679 5.0E-06 ATAAACAA 8
Sox3_HMG_DBD_dimeric_17_1 SELEX + 139557635 139557651 1.0E-06 AAAAAATGTTAGTGTGT 17
Sox1_HMG_DBD_dimeric_15_1 SELEX - 139557636 139557650 6.0E-06 CACACTAACATTTTT 15
NFE2L2_MA0150.1 JASPAR + 139559647 139559657 3.0E-06 ATGACCCAGCA 6
RREB1_MA0073.1 JASPAR + 139557575 139557594 4.0E-06 ACCCAAGCCACCCCCACAAG 20
SOX9_HMG_full_dimeric_17_1 SELEX + 139557635 139557651 1.0E-06 AAAAAATGTTAGTGTGT 17
V_NFAT_Q4_01_M00935 TRANSFAC + 139557552 139557561 7.0E-06 TTGGAAATTT 10
V_MYB_Q6_M00183 TRANSFAC - 139557528 139557537 9.0E-06 CTTAACTGCC 10
V_FOXP1_01_M00987 TRANSFAC - 139557656 139557675 5.0E-06 TTATTATAGTTTGTATTTAG 20
V_FOXP1_01_M00987 TRANSFAC - 139557660 139557679 2.0E-06 TTGTTTATTATAGTTTGTAT 20
V_HSF2_01_M00147 TRANSFAC + 139554168 139554177 8.0E-06 AGAAGATTCT 10
V_HSF2_01_M00147 TRANSFAC - 139554168 139554177 4.0E-06 AGAATCTTCT 10
V_MSX3_01_M01341 TRANSFAC + 139557451 139557466 4.0E-06 GCCAACTAATTATGGT 16
V_DBX1_01_M01483 TRANSFAC + 139557396 139557412 4.0E-06 TAAAAAATTTAGAAAAG 17
V_APOLYA_B_M00310 TRANSFAC - 139557698 139557712 7.0E-06 AAGAAAGAGCATTTC 15
V_ATF_01_M00017 TRANSFAC + 139554744 139554757 1.0E-05 CCGTGACGTCAGGC 14
V_DMRT3_01_M01148 TRANSFAC + 139557430 139557444 5.0E-06 TCTTTGATACTATTT 15
V_CEBP_Q3_M00770 TRANSFAC + 139557400 139557411 8.0E-06 AAATTTAGAAAA 12
V_HP1SITEFACTOR_Q6_M00725 TRANSFAC + 139557671 139557682 2.0E-06 AATAAACAACAG 12
V_MAFB_05_M02775 TRANSFAC + 139558172 139558188 6.0E-06 CTTTTTGCTGATTTGGT 17
V_CREB_Q4_M00178 TRANSFAC + 139554745 139554756 6.0E-06 CGTGACGTCAGG 12
V_FOXO4_02_M00476 TRANSFAC - 139557669 139557682 3.0E-06 CTGTTGTTTATTAT 14
V_SPIB_02_M02041 TRANSFAC + 139555342 139555351 1.0E-06 AGCGGAAGTA 10
V_TCF4_Q5_01_M02033 TRANSFAC - 139557428 139557437 7.0E-06 ATCAAAGAGA 10
V_SP1_Q6_01_M00931 TRANSFAC + 139554645 139554654 4.0E-06 GGGGCGGGGC 10
V_CREB_Q4_01_M00917 TRANSFAC + 139554744 139554754 5.0E-06 CCGTGACGTCA 11
V_IRF_Q6_01_M00972 TRANSFAC + 139555487 139555497 5.0E-06 GGAAGTGAAAT 11
V_NFAT3_Q3_M01734 TRANSFAC - 139557631 139557640 6.0E-06 TTTTTTTCCT 10
V_CEBP_01_M00159 TRANSFAC + 139557549 139557561 9.0E-06 TTTTTGGAAATTT 13
V_RFX4_03_M02789 TRANSFAC - 139554694 139554708 1.0E-05 CACCCTGGCAACGCG 15
V_FOXJ1_03_M02750 TRANSFAC + 139557669 139557684 1.0E-05 ATAATAAACAACAGGG 16
V_SP1_03_M02281 TRANSFAC - 139554644 139554653 7.0E-06 CCCCGCCCCC 10
V_HFH4_01_M00742 TRANSFAC - 139557659 139557671 7.0E-06 TATAGTTTGTATT 13
V_OCTAMER_02_M01477 TRANSFAC + 139557451 139557467 8.0E-06 GCCAACTAATTATGGTT 17
V_AREB6_04_M00415 TRANSFAC - 139557476 139557484 8.0E-06 CTGTTTCTT 9
V_NKX24_01_M01350 TRANSFAC - 139557440 139557455 4.0E-06 TTGGCCACTTCAAATA 16
V_E2A_Q2_M00804 TRANSFAC - 139554779 139554792 0.0E+00 GCACCTGTCTCAGA 14
V_COUPTF_Q6_M01036 TRANSFAC - 139555297 139555319 4.0E-06 CGACCTGCCCCCTGCCCCCGGCT 23
V_PU1_Q4_M01172 TRANSFAC - 139555481 139555499 5.0E-06 AGATTTCACTTCCTCCAAC 19
V_ATF4_Q2_M00514 TRANSFAC + 139554745 139554756 9.0E-06 CGTGACGTCAGG 12
V_ATF4_Q2_M00514 TRANSFAC - 139554745 139554756 5.0E-06 CCTGACGTCACG 12
V_LYF1_01_M00141 TRANSFAC - 139557497 139557505 9.0E-06 TTTGGGAAA 9
V_PSX1_01_M01435 TRANSFAC - 139557451 139557467 1.0E-06 AACCATAATTAGTTGGC 17
V_FOXP3_01_M01599 TRANSFAC + 139557672 139557679 5.0E-06 ATAAACAA 8
V_TCFAP2E_04_M02926 TRANSFAC + 139557628 139557641 6.0E-06 GTCAGGAAAAAAAT 14
V_CEBPB_01_M00109 TRANSFAC + 139557400 139557413 4.0E-06 AAATTTAGAAAAGT 14
V_PAX_Q6_M00808 TRANSFAC + 139555360 139555370 3.0E-06 CTGGAAGTAAC 11
V_ETS_Q4_M00771 TRANSFAC - 139555485 139555496 8.0E-06 TTTCACTTCCTC 12
V_EVX2_01_M01386 TRANSFAC + 139557451 139557467 2.0E-06 GCCAACTAATTATGGTT 17
V_CP2_02_M00947 TRANSFAC - 139554887 139554901 3.0E-06 GCTGGGTCGGGCCAG 15
V_SPIC_01_M02042 TRANSFAC + 139555342 139555351 1.0E-06 AGCGGAAGTA 10
V_GC_01_M00255 TRANSFAC + 139554643 139554656 7.0E-06 TGGGGGCGGGGCTC 14
V_HELIOSA_02_M01004 TRANSFAC + 139555594 139555604 7.0E-06 ATGAGGAAAAA 11
V_HELIOSA_02_M01004 TRANSFAC - 139557418 139557428 5.0E-06 ATTTGGAAAAC 11
V_EN1_02_M01365 TRANSFAC + 139557451 139557466 1.0E-06 GCCAACTAATTATGGT 16
V_FREAC3_01_M00291 TRANSFAC + 139557141 139557156 1.0E-06 TGTGCGTAAATATAGA 16
V_SPI1_03_M02078 TRANSFAC + 139555798 139555807 6.0E-06 TGAGGAAGTT 10
V_ZFP105_03_M02827 TRANSFAC + 139557668 139557682 1.0E-06 TATAATAAACAACAG 15
V_ERF_01_M01984 TRANSFAC + 139555342 139555351 5.0E-06 AGCGGAAGTA 10
V_SP1_Q6_M00196 TRANSFAC + 139554643 139554655 1.0E-06 TGGGGGCGGGGCT 13
V_MAZ_Q6_01_M02023 TRANSFAC + 139555554 139555567 7.0E-06 GGGGGAGAGAAGGA 14
V_MAZ_Q6_01_M02023 TRANSFAC + 139555562 139555575 1.0E-06 GAAGGAGGGGAGGA 14
V_RFX4_04_M02893 TRANSFAC - 139555363 139555377 5.0E-06 TTCCCTAGTTACTTC 15
V_HNF3ALPHA_Q6_M00724 TRANSFAC - 139557668 139557678 1.0E-05 TGTTTATTATA 11
V_NKX22_02_M01372 TRANSFAC - 139557439 139557455 3.0E-06 TTGGCCACTTCAAATAG 17
V_CREBATF_Q6_M00981 TRANSFAC + 139554746 139554754 9.0E-06 GTGACGTCA 9
V_MEF2_04_M00233 TRANSFAC + 139557139 139557160 5.0E-06 TTTGTGCGTAAATATAGAAACC 22
V_MEF2_04_M00233 TRANSFAC + 139557647 139557668 1.0E-06 TGTGTTTCCCTAAATACAAACT 22
V_XFD2_01_M00268 TRANSFAC + 139557669 139557682 2.0E-06 ATAATAAACAACAG 14
V_HFH1_01_M00129 TRANSFAC - 139557660 139557671 6.0E-06 TATAGTTTGTAT 12
V_HFH1_01_M00129 TRANSFAC - 139557670 139557681 3.0E-06 TGTTGTTTATTA 12
V_MEF2_Q6_01_M00941 TRANSFAC + 139559588 139559599 1.0E-05 GGCTTTTTTTGG 12
V_ATF3_Q6_M00513 TRANSFAC + 139554744 139554757 7.0E-06 CCGTGACGTCAGGC 14
V_ATF3_Q6_M00513 TRANSFAC - 139554744 139554757 7.0E-06 GCCTGACGTCACGG 14
V_SP3_Q3_M00665 TRANSFAC + 139555575 139555588 9.0E-06 ACCCCTGGGGAAGG 14
V_SP1_01_M00008 TRANSFAC - 139554578 139554587 7.0E-06 GAGGCGGGGT 10
V_EMX2_01_M01461 TRANSFAC - 139557451 139557467 6.0E-06 AACCATAATTAGTTGGC 17
V_MZF1_02_M00084 TRANSFAC + 139554251 139554263 8.0E-06 GGTTTATGGGGAA 13
V_ELK1_01_M00007 TRANSFAC + 139555339 139555354 8.0E-06 CGGAGCGGAAGTAACT 16
V_SP4_Q5_M01273 TRANSFAC - 139554644 139554654 1.0E-06 GCCCCGCCCCC 11
V_EN2_01_M01455 TRANSFAC - 139557451 139557467 9.0E-06 AACCATAATTAGTTGGC 17
V_FREAC2_01_M00290 TRANSFAC + 139557667 139557682 8.0E-06 CTATAATAAACAACAG 16
V_ELF1_Q6_M00746 TRANSFAC + 139555481 139555492 8.0E-06 GTTGGAGGAAGT 12
V_VJUN_01_M00036 TRANSFAC + 139557225 139557240 7.0E-06 TCAGTGAAGTCATTCT 16
V_ATF1_Q6_M00691 TRANSFAC + 139554744 139554754 8.0E-06 CCGTGACGTCA 11
V_POU6F1_02_M01462 TRANSFAC - 139557451 139557467 1.0E-06 AACCATAATTAGTTGGC 17
V_NKX25_03_M01414 TRANSFAC - 139557440 139557455 5.0E-06 TTGGCCACTTCAAATA 16
V_GABPBETA_Q3_M01876 TRANSFAC + 139555342 139555352 4.0E-06 AGCGGAAGTAA 11
V_TAL1_01_M01591 TRANSFAC - 139555557 139555569 1.0E-06 CCTCCTTCTCTCC 13
V_FOXL1_02_M02857 TRANSFAC + 139557497 139557512 3.0E-06 TTTCCCAAACAAAATA 16
V_FOXL1_02_M02857 TRANSFAC + 139557664 139557679 4.0E-06 AAACTATAATAAACAA 16
V_FOXL1_04_M02753 TRANSFAC + 139557667 139557683 3.0E-06 CTATAATAAACAACAGG 17
V_MSX2_01_M01393 TRANSFAC + 139557451 139557467 7.0E-06 GCCAACTAATTATGGTT 17
V_CREB_Q2_M00177 TRANSFAC + 139554661 139554672 9.0E-06 TGTGACGCAAGC 12
V_FOXO3_01_M00477 TRANSFAC - 139557669 139557682 3.0E-06 CTGTTGTTTATTAT 14
V_SPIC_02_M02077 TRANSFAC + 139555798 139555807 3.0E-06 TGAGGAAGTT 10
V_FOX_Q2_M00809 TRANSFAC - 139557669 139557681 4.0E-06 TGTTGTTTATTAT 13
V_ZFP281_01_M01597 TRANSFAC + 139554643 139554653 6.0E-06 TGGGGGCGGGG 11
V_IRF1_Q6_01_M01881 TRANSFAC - 139555486 139555499 5.0E-06 AGATTTCACTTCCT 14
V_HFH3_01_M00289 TRANSFAC - 139557669 139557681 8.0E-06 TGTTGTTTATTAT 13
V_POU6F1_03_M01479 TRANSFAC - 139557451 139557467 1.0E-06 AACCATAATTAGTTGGC 17
V_EWSR1FLI1_01_M02252 TRANSFAC + 139555553 139555570 7.0E-06 GGGGGGAGAGAAGGAGGG 18
V_EWSR1FLI1_01_M02252 TRANSFAC + 139555557 139555574 7.0E-06 GGAGAGAAGGAGGGGAGG 18
V_VDR_Q3_M00444 TRANSFAC - 139554177 139554191 1.0E-06 GGGGGAAGGGGGACA 15
V_IPF1_Q4_01_M01013 TRANSFAC + 139554207 139554221 1.0E-05 AGTCTCATTACACTC 15
V_HOXB3_01_M01330 TRANSFAC - 139557451 139557467 7.0E-06 AACCATAATTAGTTGGC 17
V_FOXO1_01_M00473 TRANSFAC + 139557671 139557680 4.0E-06 AATAAACAAC 10
V_HNF3B_Q6_M02014 TRANSFAC - 139557671 139557679 6.0E-06 TTGTTTATT 9
V_SP1_Q2_01_M00933 TRANSFAC - 139554644 139554653 4.0E-06 CCCCGCCCCC 10
V_NFE2L2_01_M02263 TRANSFAC + 139559647 139559657 3.0E-06 ATGACCCAGCA 6
V_UF1H3BETA_Q6_M01068 TRANSFAC + 139554641 139554654 3.0E-06 GTTGGGGGCGGGGC 14
V_CP2_01_M00072 TRANSFAC - 139557135 139557145 2.0E-06 GCACAAACCAG 11
V_CMAF_01_M01070 TRANSFAC + 139558172 139558190 1.0E-06 CTTTTTGCTGATTTGGTTT 19
V_SP1_Q4_01_M00932 TRANSFAC + 139554643 139554655 2.0E-06 TGGGGGCGGGGCT 13
V_GFI1_Q6_01_M02010 TRANSFAC - 139555493 139555502 8.0E-06 CTCAGATTTC 10
V_GLIS2_04_M02863 TRANSFAC - 139557430 139557443 5.0E-06 AATAGTATCAAAGA 14
V_GBX1_01_M01371 TRANSFAC + 139557451 139557467 3.0E-06 GCCAACTAATTATGGTT 17
V_HOXA4_Q2_M00640 TRANSFAC - 139557456 139557463 5.0E-06 ATAATTAG 8
V_RORA2_01_M00157 TRANSFAC + 139557533 139557545 1.0E-05 TTAAGTAGGCCAA 13
V_SPI1_02_M02043 TRANSFAC + 139555342 139555351 3.0E-06 AGCGGAAGTA 10
V_SOX14_03_M02798 TRANSFAC + 139557662 139557677 1.0E-05 ACAAACTATAATAAAC 16
V_SPIB_03_M02076 TRANSFAC + 139555798 139555807 2.0E-06 TGAGGAAGTT 10
V_NKX21_01_M01312 TRANSFAC - 139557440 139557455 4.0E-06 TTGGCCACTTCAAATA 16
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL