Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

PDCD2L Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 84306 programmed cell death 2-like chr19 + 34890302 - 34895802 34895302 Transcription Factor Binding Sites   Download all TFBS in the PDCD2L promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NF-kappaB_MA0061.1 JASPAR - 34895728 34895737 6.0E-06 GGGACTTCCC 10 HES5_bHLH_DBD_dimeric_12_1 SELEX + 34899376 34899387 4.0E-06 GGGCACGTGCCA 12 HES5_bHLH_DBD_dimeric_12_1 SELEX - 34899376 34899387 2.0E-06 TGGCACGTGCCC 12 SPIC_ETS_full_monomeric_14_1 SELEX + 34895048 34895061 5.0E-06 AAAAAAAGGAAAAA 14 HEY2_bHLH_full_dimeric_10_1 SELEX + 34899377 34899386 7.0E-06 GGCACGTGCC 10 HEY2_bHLH_full_dimeric_10_1 SELEX - 34899377 34899386 7.0E-06 GGCACGTGCC 10 HES7_bHLH_DBD_dimeric_12_1 SELEX + 34899376 34899387 2.0E-06 GGGCACGTGCCA 12 HES7_bHLH_DBD_dimeric_12_1 SELEX - 34899376 34899387 2.0E-06 TGGCACGTGCCC 12 TCF4_bHLH_full_dimeric_10_1 SELEX - 34895624 34895633 7.0E-06 TACACCTGCA 10 MNT_bHLH_DBD_dimeric_10_1 SELEX - 34895669 34895678 6.0E-06 AACACGTGCA 10 HEY1_bHLH_DBD_dimeric_10_1 SELEX + 34899377 34899386 5.0E-06 GGCACGTGCC 10 HEY1_bHLH_DBD_dimeric_10_1 SELEX - 34899377 34899386 5.0E-06 GGCACGTGCC 10 IRF3_IRF_full_trimeric_21_1 SELEX + 34895049 34895069 8.0E-06 AAAAAAGGAAAAAAGAAAGTT 21 NRF1_NRF_full_dimeric_12_1 SELEX + 34895279 34895290 4.0E-06 TGCGCGTGCGCA 12 NRF1_NRF_full_dimeric_12_1 SELEX - 34895279 34895290 3.0E-06 TGCGCACGCGCA 12 V_NFKB_C_M00208 TRANSFAC - 34895727 34895738 6.0E-06 TGGGACTTCCCC 12 V_NFKB_Q6_01_M00774 TRANSFAC + 34895723 34895738 1.0E-05 AGGCGGGGAAGTCCCA 16 V_SPDEF_04_M02915 TRANSFAC + 34895083 34895098 1.0E-06 AACTACTTCCTAGTAG 16 V_IRF_Q6_01_M00972 TRANSFAC + 34895057 34895067 5.0E-06 AAAAAAGAAAG 11 V_IRF2_Q6_M01882 TRANSFAC + 34895055 34895070 1.0E-06 GGAAAAAAGAAAGTTA 16 V_NFAT3_Q3_M01734 TRANSFAC - 34895045 34895054 6.0E-06 TTTTTTTCCT 10 V_ARNT_01_M00236 TRANSFAC - 34899374 34899389 2.0E-06 GGTGGCACGTGCCCGT 16 V_NERF_Q2_M00531 TRANSFAC - 34895080 34895097 4.0E-06 TACTAGGAAGTAGTTTTG 18 V_PU1_Q4_M01172 TRANSFAC - 34895049 34895067 1.0E-06 CTTTCTTTTTTCCTTTTTT 19 V_TCFAP2E_04_M02926 TRANSFAC + 34895042 34895055 6.0E-06 CTCAGGAAAAAAAG 14 V_TCFAP2E_04_M02926 TRANSFAC + 34895051 34895064 3.0E-06 AAAAGGAAAAAAGA 14 V_HELIOSA_02_M01004 TRANSFAC + 34895051 34895061 0.0E+00 AAAAGGAAAAA 11 V_EGR1_01_M00243 TRANSFAC - 34895224 34895235 2.0E-06 ATGCGGAGGCGT 12 V_NFAT_Q6_M00302 TRANSFAC + 34895051 34895062 3.0E-06 AAAAGGAAAAAA 12 V_IRF3_Q3_M01279 TRANSFAC - 34895052 34895064 1.0E-06 TCTTTTTTCCTTT 13 V_IRF_Q6_M00772 TRANSFAC - 34895050 34895064 9.0E-06 TCTTTTTTCCTTTTT 15 V_IRF_Q6_M00772 TRANSFAC - 34895057 34895071 1.0E-06 CTAACTTTCTTTTTT 15 V_ISRE_01_M00258 TRANSFAC - 34895055 34895069 9.0E-06 AACTTTCTTTTTTCC 15 V_ISGF3G_03_M02771 TRANSFAC + 34895056 34895070 9.0E-06 GAAAAAAGAAAGTTA 15 V_NKX32_02_M01482 TRANSFAC - 34899436 34899452 9.0E-06 CCTATCCACTTACTAAA 17 V_MTF1_06_M02882 TRANSFAC + 34895050 34895063 6.0E-06 AAAAAGGAAAAAAG 14 V_CAAT_C_M00200 TRANSFAC - 34895056 34895080 2.0E-06 GCCAAAAAGCTAACTTTCTTTTTTC 25 V_AIRE_01_M00999 TRANSFAC + 34895037 34895062 5.0E-06 CTCGTCTCAGGAAAAAAAGGAAAAAA 26 V_ZFP206_01_M01742 TRANSFAC + 34895279 34895289 7.0E-06 TGCGCGTGCGC 11 V_ZFP206_01_M01742 TRANSFAC - 34895280 34895290 3.0E-06 TGCGCACGCGC 11 V_NRF1_Q6_M00652 TRANSFAC + 34895281 34895290 6.0E-06 CGCGTGCGCA 10 V_IRF1_Q6_01_M01881 TRANSFAC - 34895056 34895069 2.0E-06 AACTTTCTTTTTTC 14 V_NFKAPPAB_01_M00054 TRANSFAC - 34895728 34895737 7.0E-06 GGGACTTCCC 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.