Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

MRI1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
84245 methylthioribose-1-phosphate isomerase 1 chr19 +13870336 - 13875836 13875336

Transcription Factor Binding Sites

 
Download all TFBS in the MRI1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
Creb3l2_bZIP_DBD_dimeric_12_1 SELEX + 13875097 13875108 3.0E-06 GGCCACGTGGAA 12
Creb3l2_bZIP_DBD_dimeric_12_1 SELEX - 13875097 13875108 3.0E-06 TTCCACGTGGCC 12
FOXL1_forkhead_full_dimeric_13_1 SELEX - 13880190 13880202 4.0E-06 AGTTAATAAATAG 13
HNF1B_MA0153.1 JASPAR - 13880196 13880207 1.0E-05 TCAGTAGTTAAT 12
Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 13880191 13880201 9.0E-06 GTTAATAAATA 11
TCF4_bHLH_full_dimeric_10_1 SELEX - 13880251 13880260 3.0E-06 CACACCTGTA 10
HNF1A_homeodomain_full_dimeric_15_1 SELEX + 13880188 13880202 6.0E-06 GGCTATTTATTAACT 15
HNF1A_homeodomain_full_dimeric_15_1 SELEX - 13880188 13880202 3.0E-06 AGTTAATAAATAGCC 15
HNF1B_homeodomain_full_dimeric_13_1 SELEX + 13880189 13880201 8.0E-06 GCTATTTATTAAC 13
HNF1B_homeodomain_full_dimeric_13_1 SELEX - 13880189 13880201 4.0E-06 GTTAATAAATAGC 13
ID4_bHLH_DBD_dimeric_10_1 SELEX - 13880295 13880304 8.0E-06 TGCACCTGTT 10
CREB3L1_bZIP_full_dimeric_12_1 SELEX + 13875097 13875108 6.0E-06 GGCCACGTGGAA 12
FOXO3_forkhead_full_dimeric_14_1 SELEX - 13880172 13880185 6.0E-06 GTCCACATGTTGAA 14
Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX - 13880197 13880211 1.0E-05 GAGGTCAGTAGTTAA 15
HNF1B_homeodomain_full_dimeric_15_1 SELEX + 13880188 13880202 6.0E-06 GGCTATTTATTAACT 15
HNF1B_homeodomain_full_dimeric_15_1 SELEX - 13880188 13880202 3.0E-06 AGTTAATAAATAGCC 15
NRF1_NRF_full_dimeric_12_1 SELEX + 13875287 13875298 8.0E-06 TGCGCATGTGCG 12
NRF1_NRF_full_dimeric_12_1 SELEX - 13875287 13875298 5.0E-06 CGCACATGCGCA 12
FOXO6_forkhead_DBD_dimeric_14_1 SELEX + 13880172 13880185 7.0E-06 TTCAACATGTGGAC 14
HNF1A_MA0046.1 JASPAR - 13880189 13880202 1.0E-06 AGTTAATAAATAGC 14
FOXO1_forkhead_DBD_dimeric_14_1 SELEX + 13880172 13880185 9.0E-06 TTCAACATGTGGAC 14
FOXO1_forkhead_DBD_dimeric_14_1 SELEX - 13880172 13880185 5.0E-06 GTCCACATGTTGAA 14
V_ELF5_03_M02057 TRANSFAC - 13875305 13875314 5.0E-06 CCCGGAAAAA 10
V_DBX1_01_M01483 TRANSFAC - 13880187 13880203 1.0E-05 TAGTTAATAAATAGCCT 17
V_CDX2_Q5_01_M01659 TRANSFAC - 13880190 13880200 5.0E-06 TTAATAAATAG 11
V_OSF2_Q6_M00731 TRANSFAC - 13875035 13875042 1.0E-05 ACCACAAA 8
V_AREB6_03_M00414 TRANSFAC - 13880294 13880305 3.0E-06 ATGCACCTGTTA 12
V_AML3_Q6_M01856 TRANSFAC - 13875036 13875043 1.0E-05 AACCACAA 8
V_IK_Q5_M01169 TRANSFAC - 13880231 13880240 3.0E-06 TTTGGGAGGC 10
V_RORA_Q4_M01138 TRANSFAC - 13875988 13875998 9.0E-06 ATAGTGGGTCA 11
V_SP1_Q6_01_M00931 TRANSFAC - 13875331 13875340 4.0E-06 GGGGCGGGGC 10
V_HNF3_Q6_01_M01012 TRANSFAC + 13875961 13875978 7.0E-06 AATTATATTGACTCTTTT 18
V_LYF1_01_M00141 TRANSFAC - 13880232 13880240 9.0E-06 TTTGGGAGG 9
V_NKX62_Q2_M00489 TRANSFAC - 13880189 13880200 7.0E-06 TTAATAAATAGC 12
V_LXRB_RXRA_Q5_M02021 TRANSFAC - 13880198 13880212 0.0E+00 TGAGGTCAGTAGTTA 15
V_HNF1_C_M00206 TRANSFAC + 13880188 13880204 0.0E+00 GGCTATTTATTAACTAC 17
V_HNF6_Q6_M00639 TRANSFAC - 13875965 13875976 5.0E-06 AAGAGTCAATAT 12
V_ETV7_01_M02071 TRANSFAC - 13875305 13875314 2.0E-06 CCCGGAAAAA 10
V_HNF1_Q6_M00790 TRANSFAC - 13880186 13880203 4.0E-06 TAGTTAATAAATAGCCTG 18
V_HNF1_Q6_M00790 TRANSFAC + 13880187 13880204 7.0E-06 AGGCTATTTATTAACTAC 18
V_XFD3_01_M00269 TRANSFAC - 13875962 13875975 2.0E-06 AGAGTCAATATAAT 14
V_AML2_01_M01759 TRANSFAC - 13875036 13875043 1.0E-05 AACCACAA 8
V_RSRFC4_Q2_M00407 TRANSFAC - 13880186 13880202 9.0E-06 AGTTAATAAATAGCCTG 17
V_SP1_Q6_M00196 TRANSFAC - 13875330 13875342 4.0E-06 GCGGGGCGGGGCC 13
V_HNF1B_04_M02266 TRANSFAC - 13880196 13880207 1.0E-05 TCAGTAGTTAAT 12
V_STAT5A_02_M00460 TRANSFAC - 13875100 13875123 2.0E-06 TTCCCAGGACGCGGATTCCACGTG 24
V_STAT5A_02_M00460 TRANSFAC - 13875124 13875147 1.0E-06 TTCCCAGGACGCGGATTCCACGGG 24
V_STAT5A_02_M00460 TRANSFAC - 13875148 13875171 2.0E-06 TTCCCAGGAGGCGGATTCCACGGG 24
V_STAT5A_02_M00460 TRANSFAC - 13875244 13875267 2.0E-06 TTCCCAGGAGGCGGATTCCACGGG 24
V_HNF1_Q6_01_M01011 TRANSFAC + 13880185 13880205 3.0E-06 CCAGGCTATTTATTAACTACT 21
V_HNF1_Q6_01_M01011 TRANSFAC - 13880185 13880205 2.0E-06 AGTAGTTAATAAATAGCCTGG 21
V_XFD2_01_M00268 TRANSFAC - 13880187 13880200 1.0E-05 TTAATAAATAGCCT 14
V_NCX_02_M01420 TRANSFAC - 13880187 13880203 4.0E-06 TAGTTAATAAATAGCCT 17
V_NCX_02_M01420 TRANSFAC - 13880191 13880207 4.0E-06 TCAGTAGTTAATAAATA 17
V_SP4_Q5_M01273 TRANSFAC + 13875331 13875341 2.0E-06 GCCCCGCCCCG 11
V_HNF1_01_M00132 TRANSFAC - 13880188 13880202 1.0E-06 AGTTAATAAATAGCC 15
V_AREB6_02_M00413 TRANSFAC - 13880250 13880261 6.0E-06 TCACACCTGTAA 12
V_ZFP206_01_M01742 TRANSFAC + 13875287 13875297 7.0E-06 TGCGCATGTGC 11
V_NRF1_Q6_M00652 TRANSFAC - 13875287 13875296 9.0E-06 CACATGCGCA 10
V_TBX5_Q5_M01044 TRANSFAC - 13880253 13880262 3.0E-06 CTCACACCTG 10
V_LXRA_RXRA_Q3_M00647 TRANSFAC - 13880200 13880214 0.0E+00 CTTGAGGTCAGTAGT 15
V_HNF1A_Q5_M02013 TRANSFAC - 13880192 13880202 1.0E-06 AGTTAATAAAT 11
V_HOXD8_01_M01432 TRANSFAC - 13880187 13880203 2.0E-06 TAGTTAATAAATAGCCT 17
V_HOXD8_01_M01432 TRANSFAC - 13880191 13880207 5.0E-06 TCAGTAGTTAATAAATA 17
V_SP1_Q4_01_M00932 TRANSFAC - 13875330 13875342 6.0E-06 GCGGGGCGGGGCC 13
V_HNF1A_01_M02162 TRANSFAC - 13880189 13880202 1.0E-06 AGTTAATAAATAGC 14
V_T3RALPHA_Q6_M01724 TRANSFAC - 13880204 13880214 1.0E-06 CTTGAGGTCAG 11
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL