Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

NBPF3


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
84224 neuroblastoma breakpoint family, member 3 chr1 +21761620 - 21767120 21766620

Transcription Factor Binding Sites

 
Download all TFBS in the NBPF3 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
NKX2-8_homeodomain_full_monomeric_9_1 SELEX - 21766346 21766354 3.0E-06 CCACTTGAA 9
Tp53_p53l_DBD_dimeric_18_1 SELEX + 21763605 21763622 5.0E-06 ACAGGTCCCTGGTCATGC 18
KLF16_C2H2_DBD_monomeric_11_1 SELEX - 21766307 21766317 7.0E-06 GACACACCCCC 11
Tp53_p53l_DBD_dimeric_18_2 SELEX + 21766490 21766507 9.0E-06 AACCTGCTCGAACCTGTT 18
EWSR1-FLI1_MA0149.1 JASPAR - 21767553 21767570 1.0E-06 GAAGGAAAGCAAGGAAAC 18
Sox17_HMG_DBD_dimeric_15_1 SELEX - 21766232 21766246 8.0E-06 TACATTTACATGGTT 15
NKX2-3_homeodomain_full_monomeric_10_1 SELEX - 21766346 21766355 9.0E-06 GCCACTTGAA 10
Foxd3_MA0041.1 JASPAR - 21766259 21766270 3.0E-06 TTTTATTTTTTT 12
FOXI1_forkhead_full_dimeric_17_1 SELEX + 21766249 21766265 1.0E-05 ATCTTTTCAGAAAAAAA 17
RUNX1_MA0002.2 JASPAR + 21767450 21767460 2.0E-06 TGCTGTGGTTT 11
REST_MA0138.2 JASPAR + 21763757 21763777 1.0E-06 GTCAGAACCCAGGAGAGGAGT 21
FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 21766259 21766271 3.0E-06 AAAAAAATAAAAT 13
FLI1_ETS_full_monomeric_14_1 SELEX + 21767177 21767190 7.0E-06 GCCGGAAATCGGTT 14
V_AML_Q6_M00769 TRANSFAC + 21767448 21767462 9.0E-06 GTTGCTGTGGTTTCC 15
V_SMAD3_Q6_01_M01888 TRANSFAC - 21767466 21767478 9.0E-06 AGACAGACAGGCA 13
V_SMAD3_Q6_01_M01888 TRANSFAC - 21767470 21767482 1.0E-06 AGACAGACAGACA 13
V_HMGIY_Q3_M01010 TRANSFAC - 21766257 21766271 3.0E-06 ATTTTATTTTTTTCT 15
V_FOXD3_01_M00130 TRANSFAC - 21766259 21766270 3.0E-06 TTTTATTTTTTT 12
V_HOXA13_02_M01297 TRANSFAC + 21766263 21766271 4.0E-06 AAATAAAAT 9
V_FOXO3A_Q1_M01137 TRANSFAC + 21766260 21766271 5.0E-06 AAAAAATAAAAT 12
V_AP4_Q6_01_M00927 TRANSFAC - 21763550 21763558 6.0E-06 ACCAGCTGC 9
V_TCFAP2E_04_M02926 TRANSFAC + 21766254 21766267 0.0E+00 TTCAGAAAAAAATA 14
V_ELF4_04_M02850 TRANSFAC + 21766252 21766268 3.0E-06 TTTTCAGAAAAAAATAA 17
V_ELF4_04_M02850 TRANSFAC + 21766253 21766269 7.0E-06 TTTCAGAAAAAAATAAA 17
V_GC_01_M00255 TRANSFAC + 21763725 21763738 4.0E-06 AGGGGGAGGAGCCT 14
V_ZFP105_03_M02827 TRANSFAC + 21766257 21766271 6.0E-06 AGAAAAAAATAAAAT 15
V_ZFP410_03_M02832 TRANSFAC + 21766666 21766682 1.0E-05 GGTACTGGGATGGGTAG 17
V_RUNX1_01_M02257 TRANSFAC + 21767450 21767460 2.0E-06 TGCTGTGGTTT 11
V_HNF1_Q6_01_M01011 TRANSFAC + 21766254 21766274 7.0E-06 TTCAGAAAAAAATAAAATCCG 21
V_MATH1_Q2_M01716 TRANSFAC + 21763550 21763559 3.0E-06 GCAGCTGGTG 10
V_ASCL2_03_M02737 TRANSFAC - 21763545 21763561 1.0E-05 TCCACCAGCTGCCCAAG 17
V_NFE4_Q5_M02105 TRANSFAC - 21766631 21766642 9.0E-06 ACCCCTCGCCTG 12
V_PPARG_03_M00528 TRANSFAC + 21763632 21763648 8.0E-06 ACCCTGGGAAAAGGTCT 17
V_MINI19_B_M00323 TRANSFAC - 21763743 21763763 7.0E-06 TTCTGACACCACCCCGAGGGC 21
V_AP4_01_M00005 TRANSFAC + 21766654 21766671 2.0E-06 TGAGACAGCGGCGGTACT 18
V_ZFP206_01_M01742 TRANSFAC - 21766610 21766620 8.0E-06 TGCGCCTGCGC 11
V_ZFP206_01_M01742 TRANSFAC - 21766616 21766626 8.0E-06 TGCGCCTGCGC 11
V_STAT1STAT1_Q3_M01212 TRANSFAC + 21767518 21767530 7.0E-06 CTTTCACCGAAGA 13
V_REST_02_M02256 TRANSFAC + 21763757 21763777 1.0E-06 GTCAGAACCCAGGAGAGGAGT 21
V_SRF_06_M02916 TRANSFAC + 21766252 21766268 7.0E-06 TTTTCAGAAAAAAATAA 17
V_SRF_06_M02916 TRANSFAC + 21766255 21766271 9.0E-06 TCAGAAAAAAATAAAAT 17
V_SRF_06_M02916 TRANSFAC + 21766257 21766273 6.0E-06 AGAAAAAAATAAAATCC 17
V_EWSR1FLI1_01_M02252 TRANSFAC - 21767553 21767570 1.0E-06 GAAGGAAAGCAAGGAAAC 18
V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC + 21767453 21767460 1.0E-05 TGTGGTTT 8
V_SMAD3_Q6_M00701 TRANSFAC + 21767470 21767478 3.0E-06 TGTCTGTCT 9
V_SMAD3_Q6_M00701 TRANSFAC + 21767474 21767482 3.0E-06 TGTCTGTCT 9
V_SP1_Q4_01_M00932 TRANSFAC + 21763725 21763737 9.0E-06 AGGGGGAGGAGCC 13
V_RNF96_01_M01199 TRANSFAC - 21766784 21766793 7.0E-06 GCCCGCAGCC 10
V_TCF3_05_M02920 TRANSFAC + 21766257 21766271 7.0E-06 AGAAAAAAATAAAAT 15
V_PPARA_01_M00242 TRANSFAC - 21767539 21767558 4.0E-06 GGAAACTAGGCCAAACGTCT 20
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL