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POLR1B


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
84172 polymerase (RNA) I polypeptide B, 128kDa chr2 +113294491 - 113299991 113299491

Transcription Factor Binding Sites

 
Download all TFBS in the POLR1B promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
GABPA_MA0062.2 JASPAR - 113299996 113300006 7.0E-06 CCGGAAGTAGT 11
Myc_MA0147.1 JASPAR + 113300193 113300202 9.0E-06 CGCACGTGGA 10
SPIC_ETS_full_monomeric_14_1 SELEX + 113299104 113299117 3.0E-06 GGAAAGGGGAAGTT 14
PROX1_PROX_DBD_dimeric_12_1 SELEX - 113300428 113300439 7.0E-06 TAAGACGCCTCG 12
En1_MA0027.1 JASPAR - 113299992 113300002 5.0E-06 AAGTAGTGGCC 11
NR2F1_nuclearreceptor_DBD_monomeric_13_1 SELEX + 113299739 113299751 5.0E-06 AAGAGGTCACATG 13
IRF8_IRF_full_dimeric_14_1 SELEX + 113299911 113299924 1.0E-06 GAGAAACCGAAACC 14
TBP_MA0108.2 JASPAR + 113298913 113298927 8.0E-06 CTATATAAAGAACTA 15
NFYA_MA0060.1 JASPAR + 113299721 113299736 1.0E-06 CTGAGCCAATGAGAGC 16
ISL2_homeodomain_DBD_monomeric_8_1 SELEX - 113300917 113300924 1.0E-05 GCACTTAA 8
IRF5_IRF_full_monomeric_11_1 SELEX + 113299915 113299925 3.0E-06 AACCGAAACCG 11
NKX3-2_homeodomain_DBD_monomeric_9_1 SELEX - 113300917 113300925 7.0E-06 AGCACTTAA 9
Pax4_MA0068.1 JASPAR - 113299157 113299186 5.0E-06 AATTAAAACAATGAATTAAACCACCACTAC 30
SPIB_ETS_DBD_monomeric_14_1 SELEX + 113299104 113299117 1.0E-06 GGAAAGGGGAAGTT 14
IRF1_MA0050.1 JASPAR + 113299913 113299924 1.0E-06 GAAACCGAAACC 12
IRF1_MA0050.1 JASPAR + 113300957 113300968 7.0E-06 GATAATGAAAGC 12
NR4A2_nuclearreceptor_full_dimeric_17_1 SELEX + 113300311 113300327 2.0E-06 AGGTCACAGTATGACCC 17
NR4A2_nuclearreceptor_full_dimeric_17_1 SELEX - 113300311 113300327 1.0E-06 GGGTCATACTGTGACCT 17
GRHL1_CP2_DBD_dimer-of-dimers_17_1 SELEX - 113300382 113300398 2.0E-06 GTCCTGTTTAACATGTT 17
SOX14_HMG_DBD_dimeric_13_1 SELEX - 113300977 113300989 1.0E-05 TCAAGAACATTGG 13
NFATC1_NFAT_full_dimeric_20_1 SELEX + 113299949 113299968 6.0E-06 AGAGGGAACTACATTTCCCA 20
NFATC1_NFAT_full_dimeric_20_1 SELEX - 113299951 113299970 1.0E-05 GCTGGGAAATGTAGTTCCCT 20
NKX2-3_homeodomain_full_monomeric_10_1 SELEX - 113300916 113300925 4.0E-06 AGCACTTAAA 10
IRF9_IRF_full_trimeric_15_1 SELEX + 113299910 113299924 1.0E-06 CGAGAAACCGAAACC 15
ELK1_ETS_full_monomeric_10_1 SELEX - 113299998 113300007 7.0E-06 GCCGGAAGTA 10
GABPA_ETS_full_monomeric_10_1 SELEX - 113299998 113300007 5.0E-06 GCCGGAAGTA 10
IRF4_IRF_full_dimeric_15_1 SELEX + 113299911 113299925 1.0E-06 GAGAAACCGAAACCG 15
HMX2_homeodomain_DBD_monomeric_11_1 SELEX - 113300915 113300925 6.0E-06 AGCACTTAAAT 11
Elk3_ETS_DBD_monomeric_10_1 SELEX - 113299998 113300007 6.0E-06 GCCGGAAGTA 10
IRF5_IRF_full_dimeric_14_1 SELEX + 113299911 113299924 3.0E-06 GAGAAACCGAAACC 14
SPI1_ETS_full_monomeric_14_1 SELEX + 113299104 113299117 1.0E-06 GGAAAGGGGAAGTT 14
RARG_nuclearreceptor_full_dimeric_16_1 SELEX + 113299214 113299229 1.0E-05 TAGGTCAAAACTTAAC 16
Irx3_homeodomain_DBD_dimeric_12_1 SELEX + 113300381 113300392 1.0E-05 CAACATGTTAAA 12
HMX1_homeodomain_DBD_monomeric_11_1 SELEX - 113300915 113300925 5.0E-06 AGCACTTAAAT 11
V_SPI1_01_M01203 TRANSFAC + 113299104 113299120 4.0E-06 GGAAAGGGGAAGTTGAC 17
V_DBX1_01_M01483 TRANSFAC + 113299055 113299071 8.0E-06 GAATTTTTTATAAAAAG 17
V_CDX2_Q5_01_M01659 TRANSFAC - 113299058 113299068 5.0E-06 TTTATAAAAAA 11
V_MMEF2_Q6_M00405 TRANSFAC - 113299056 113299071 2.0E-06 CTTTTTATAAAAAATT 16
V_GABP_B_M00341 TRANSFAC + 113299013 113299024 5.0E-06 GCCGGAAGTTCA 12
V_MEF2_02_M00231 TRANSFAC - 113298908 113298929 1.0E-06 TGTAGTTCTTTATATAGCCTAT 22
V_IRF2_Q6_M01882 TRANSFAC + 113299911 113299926 8.0E-06 GAGAAACCGAAACCGC 16
V_CEBP_Q2_M00190 TRANSFAC - 113299266 113299279 2.0E-06 ATATTGCGTTATAA 14
V_AP2_Q6_01_M00915 TRANSFAC + 113299457 113299469 1.0E-05 CCTTCCCCAGGCC 13
V_AP2_Q6_01_M00915 TRANSFAC + 113299468 113299480 6.0E-06 CCTCCCCCAGGCC 13
V_IRF3_05_M02767 TRANSFAC + 113299912 113299925 2.0E-06 AGAAACCGAAACCG 14
V_MAF_Q6_M00648 TRANSFAC + 113299106 113299121 9.0E-06 AAAGGGGAAGTTGACA 16
V_GABPA_04_M02858 TRANSFAC - 113299810 113299825 4.0E-06 CCATATTCCGCCCCAC 16
V_PITX2_Q6_M02114 TRANSFAC + 113298968 113298977 1.0E-06 TGTAATCCCA 10
V_HNF4A_04_M02764 TRANSFAC - 113299899 113299915 3.0E-06 TTCTCGGGGTCAACGTA 17
V_PU1_Q4_M01172 TRANSFAC - 113299105 113299123 1.0E-06 ACTGTCAACTTCCCCTTTC 19
V_HOXD13_01_M01404 TRANSFAC - 113299056 113299071 2.0E-06 CTTTTTATAAAAAATT 16
V_NFY_Q6_01_M00775 TRANSFAC + 113299720 113299732 3.0E-06 ACTGAGCCAATGA 13
V_ZFP691_03_M02833 TRANSFAC + 113300915 113300931 7.0E-06 ATTTAAGTGCTCCCTGT 17
V_PEA3_01_M01991 TRANSFAC - 113299998 113300007 8.0E-06 GCCGGAAGTA 10
V_RPC155_01_M01798 TRANSFAC + 113299014 113299029 2.0E-06 CCGGAAGTTCAAGACC 16
V_MYC_01_M02250 TRANSFAC + 113300193 113300202 9.0E-06 CGCACGTGGA 10
V_PITX1_Q6_M01826 TRANSFAC + 113301042 113301052 3.0E-06 GCAACTAATCC 11
V_ELF4_04_M02850 TRANSFAC - 113299053 113299069 9.0E-06 TTTTATAAAAAATTCGA 17
V_ELF4_04_M02850 TRANSFAC - 113299055 113299071 2.0E-06 CTTTTTATAAAAAATTC 17
V_TATA_01_M00252 TRANSFAC + 113298913 113298927 8.0E-06 CTATATAAAGAACTA 15
V_RSRFC4_Q2_M00407 TRANSFAC + 113298910 113298926 7.0E-06 AGGCTATATAAAGAACT 17
V_IRX4_01_M01410 TRANSFAC + 113300378 113300394 1.0E-06 GCACAACATGTTAAACA 17
V_ER81_02_M02065 TRANSFAC - 113299998 113300007 8.0E-06 GCCGGAAGTA 10
V_IRF3_Q3_M01279 TRANSFAC - 113299668 113299680 7.0E-06 TCTGTTTCCCTTC 13
V_OCT1_05_M00161 TRANSFAC - 113299079 113299092 8.0E-06 GTACTTTTCATTCC 14
V_TTF1_Q6_M00794 TRANSFAC - 113300121 113300132 5.0E-06 CAGTCAAGTGCT 12
V_MEF2_03_M00232 TRANSFAC - 113298908 113298929 0.0E+00 TGTAGTTCTTTATATAGCCTAT 22
V_ISRE_01_M00258 TRANSFAC - 113299911 113299925 3.0E-06 CGGTTTCGGTTTCTC 15
V_GADP_01_M01258 TRANSFAC + 113299998 113300009 5.0E-06 TACTTCCGGCGT 12
V_MEF2_04_M00233 TRANSFAC + 113299200 113299221 8.0E-06 CATGGTTGTATACATAGGTCAA 22
V_SPIB_01_M01204 TRANSFAC + 113299104 113299120 8.0E-06 GGAAAGGGGAAGTTGAC 17
V_TEL2_Q6_M00678 TRANSFAC + 113299997 113300006 6.0E-06 CTACTTCCGG 10
V_IRF4_03_M02768 TRANSFAC + 113299913 113299927 3.0E-06 GAAACCGAAACCGCA 15
V_MEF2_Q6_01_M00941 TRANSFAC + 113298911 113298922 6.0E-06 GGCTATATAAAG 12
V_ARID3A_04_M02735 TRANSFAC - 113299056 113299072 6.0E-06 ACTTTTTATAAAAAATT 17
V_TBP_06_M02814 TRANSFAC + 113299055 113299070 5.0E-06 GAATTTTTTATAAAAA 16
V_TBP_06_M02814 TRANSFAC - 113299055 113299070 1.0E-06 TTTTTATAAAAAATTC 16
V_TBP_06_M02814 TRANSFAC + 113299057 113299072 1.0E-06 ATTTTTTATAAAAAGT 16
V_TBP_06_M02814 TRANSFAC - 113299057 113299072 1.0E-06 ACTTTTTATAAAAAAT 16
V_TBP_06_M02814 TRANSFAC - 113299059 113299074 7.0E-06 TCACTTTTTATAAAAA 16
V_PEA3_02_M02066 TRANSFAC - 113299998 113300007 8.0E-06 GCCGGAAGTA 10
V_NKX23_01_M01457 TRANSFAC + 113300116 113300131 2.0E-06 CCTAAAGCACTTGACT 16
V_IRX5_01_M01472 TRANSFAC + 113300378 113300394 1.0E-05 GCACAACATGTTAAACA 17
V_ICSBP_Q6_M00699 TRANSFAC + 113299914 113299925 5.0E-06 AAACCGAAACCG 12
V_PAX8_B_M00328 TRANSFAC - 113300905 113300922 1.0E-06 ACTTAAATGCATGAACTG 18
V_ELK1_01_M00007 TRANSFAC + 113299010 113299025 3.0E-06 GAGGCCGGAAGTTCAA 16
V_NET_01_M01982 TRANSFAC - 113299998 113300007 7.0E-06 GCCGGAAGTA 10
V_ELF1_Q6_M00746 TRANSFAC + 113299105 113299116 1.0E-05 GAAAGGGGAAGT 12
V_GCNF_01_M00526 TRANSFAC + 113299015 113299032 3.0E-06 CGGAAGTTCAAGACCAGC 18
V_IRX3_02_M01485 TRANSFAC + 113300378 113300394 6.0E-06 GCACAACATGTTAAACA 17
V_ALPHACP1_01_M00687 TRANSFAC + 113299723 113299733 7.0E-06 GAGCCAATGAG 11
V_TTF1_Q5_M02034 TRANSFAC + 113300120 113300133 0.0E+00 AAGCACTTGACTGA 14
V_IRF5_03_M02769 TRANSFAC + 113299912 113299926 1.0E-06 AGAAACCGAAACCGC 15
V_NFYC_Q5_M02107 TRANSFAC + 113299723 113299736 1.0E-06 GAGCCAATGAGAGC 14
V_NKX3A_02_M01383 TRANSFAC - 113300914 113300930 7.0E-06 CAGGGAGCACTTAAATG 17
V_ZBTB4_04_M02929 TRANSFAC - 113299256 113299271 8.0E-06 TTATAACTGGCATACA 16
V_TCF7_04_M02921 TRANSFAC + 113299057 113299071 1.0E-06 ATTTTTTATAAAAAG 15
V_TCF7_04_M02921 TRANSFAC - 113299058 113299072 0.0E+00 ACTTTTTATAAAAAA 15
V_NFY_01_M00287 TRANSFAC + 113299721 113299736 0.0E+00 CTGAGCCAATGAGAGC 16
V_BDP1_01_M01796 TRANSFAC - 113299018 113299029 7.0E-06 GGTCTTGAACTT 12
V_NKX22_01_M00485 TRANSFAC - 113300120 113300129 6.0E-06 TCAAGTGCTT 10
V_PITX2_Q2_M00482 TRANSFAC + 113298968 113298978 1.0E-06 TGTAATCCCAG 11
V_SAP1A_03_M02058 TRANSFAC - 113299998 113300007 9.0E-06 GCCGGAAGTA 10
V_ALX3_01_M01355 TRANSFAC + 113299709 113299725 9.0E-06 GATCCTAATTGACTGAG 17
V_MEF2A_05_M01301 TRANSFAC + 113298911 113298922 5.0E-06 GGCTATATAAAG 12
V_NFYA_Q5_M02106 TRANSFAC + 113299723 113299736 1.0E-06 GAGCCAATGAGAGC 14
V_ALX3_02_M02943 TRANSFAC + 113299709 113299725 9.0E-06 GATCCTAATTGACTGAG 17
V_AR_Q2_M00447 TRANSFAC - 113298921 113298935 0.0E+00 AGTAGTTGTAGTTCT 15
V_PAX4_04_M00380 TRANSFAC - 113299157 113299186 6.0E-06 AATTAAAACAATGAATTAAACCACCACTAC 30
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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