Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ULK1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 8408 unc-51 like autophagy activating kinase 1 chr12 + 132374278 - 132379778 132379278 Transcription Factor Binding Sites   Download all TFBS in the ULK1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXJ2_forkhead_DBD_dimeric_13_1 SELEX - 132380721 132380733 4.0E-06 GTCAACAAACACA 13 Foxa2_MA0047.2 JASPAR + 132380727 132380738 4.0E-06 TGTTGACATTGC 12 Foxa2_MA0047.2 JASPAR + 132381056 132381067 6.0E-06 TGTTTACTGAGC 12 Tp53_p53l_DBD_dimeric_18_1 SELEX + 132380168 132380185 2.0E-06 TCAAGTGCATTAACAAGA 18 FOXA1_MA0148.1 JASPAR + 132381056 132381066 7.0E-06 TGTTTACTGAG 11 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 132380725 132380736 1.0E-06 AATGTCAACAAA 12 FOXL1_forkhead_full_dimeric_13_1 SELEX - 132380722 132380734 2.0E-06 TGTCAACAAACAC 13 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX + 132381264 132381275 8.0E-06 GCTTTTCCCGCC 12 FOXC1_forkhead_DBD_monomeric_11_1 SELEX - 132380726 132380736 6.0E-06 AATGTCAACAA 11 Mafb_bZIP_DBD_monomeric_12_1 SELEX + 132381029 132381040 0.0E+00 AAAGTGCTGACT 12 EWSR1-FLI1_MA0149.1 JASPAR + 132378668 132378685 4.0E-06 GGAAGGAGGGGAACAGGG 18 EWSR1-FLI1_MA0149.1 JASPAR + 132378780 132378797 5.0E-06 GGAAGGGAGGGGGCAGGG 18 EWSR1-FLI1_MA0149.1 JASPAR + 132378821 132378838 3.0E-06 GAAAAGGAGGGAGGAGGA 18 EWSR1-FLI1_MA0149.1 JASPAR + 132378854 132378871 3.0E-06 GGAGGGAGGGGAGCAGAG 18 EWSR1-FLI1_MA0149.1 JASPAR - 132381295 132381312 5.0E-06 GGAGGGAGGAAAGCAGGG 18 EWSR1-FLI1_MA0149.1 JASPAR - 132381296 132381313 1.0E-06 GGGAGGGAGGAAAGCAGG 18 EWSR1-FLI1_MA0149.1 JASPAR - 132381300 132381317 0.0E+00 GGAAGGGAGGGAGGAAAG 18 EWSR1-FLI1_MA0149.1 JASPAR - 132381304 132381321 6.0E-06 AGGAGGAAGGGAGGGAGG 18 Klf4_MA0039.2 JASPAR - 132379002 132379011 5.0E-06 TGGGTGGGGC 10 TFAP2B_TFAP_DBD_dimeric_12_1 SELEX + 132380585 132380596 4.0E-06 CGCCCCAGGGCA 12 IRF1_MA0050.1 JASPAR + 132382451 132382462 9.0E-06 CAAAACAAAACC 12 Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1 SELEX - 132378768 132378783 5.0E-06 TTCCGCCCCCTCCCAT 16 Ar_MA0007.1 JASPAR + 132381223 132381244 8.0E-06 CCAGGCACACTGTGTCCTGGAG 22 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 132380723 132380733 1.0E-06 GTCAACAAACA 11 ZNF740_C2H2_full_monomeric_10_1 SELEX - 132381187 132381196 3.0E-06 CCCCCCCCAC 10 SP1_MA0079.2 JASPAR + 132379081 132379090 7.0E-06 CCCCGCCCCC 10 SP1_MA0079.2 JASPAR - 132380784 132380793 3.0E-06 CCCCTCCCCC 10 SP4_C2H2_full_monomeric_17_1 SELEX + 132379065 132379081 2.0E-06 CAGGCCCCGCCCCATTC 17 SP4_C2H2_full_monomeric_17_1 SELEX + 132379129 132379145 4.0E-06 CAGGCCCCGCCCTCATC 17 NR3C2_nuclearreceptor_DBD_dimeric_17_1 SELEX + 132381225 132381241 3.0E-06 AGGCACACTGTGTCCTG 17 NR3C2_nuclearreceptor_DBD_dimeric_17_1 SELEX - 132381225 132381241 3.0E-06 CAGGACACAGTGTGCCT 17 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 132380723 132380733 3.0E-06 GTCAACAAACA 11 NRL_bZIP_DBD_monomeric_11_1 SELEX + 132381029 132381039 3.0E-06 AAAGTGCTGAC 11 TFAP2C_TFAP_full_dimeric_12_1 SELEX + 132380585 132380596 2.0E-06 CGCCCCAGGGCA 12 Myf_MA0055.1 JASPAR - 132381256 132381267 5.0E-06 AAGCAGCAGGAG 12 Zfp740_C2H2_DBD_monomeric_10_1 SELEX - 132381187 132381196 5.0E-06 CCCCCCCCAC 10 MAFK_bZIP_full_monomeric_12_1 SELEX + 132381028 132381039 7.0E-06 CAAAGTGCTGAC 12 IRF3_IRF_full_trimeric_21_1 SELEX + 132380213 132380233 5.0E-06 TGGGGAAGGAAATCAAAATCC 21 TFAP2A_TFAP_DBD_dimeric_12_1 SELEX + 132380585 132380596 5.0E-06 CGCCCCAGGGCA 12 Sox2_MA0143.1 JASPAR + 132378637 132378651 6.0E-06 CCATTCTCCTGTAGA 15 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 132380723 132380735 1.0E-06 ATGTCAACAAACA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 132380721 132380733 3.0E-06 GTCAACAAACACA 13 NR3C1_nuclearreceptor_DBD_dimeric_17_1 SELEX + 132381225 132381241 4.0E-06 AGGCACACTGTGTCCTG 17 NR3C1_nuclearreceptor_DBD_dimeric_17_1 SELEX - 132381225 132381241 4.0E-06 CAGGACACAGTGTGCCT 17 FOXB1_forkhead_DBD_monomeric_11_1 SELEX - 132380726 132380736 6.0E-06 AATGTCAACAA 11 Tcfap2a_TFAP_DBD_dimeric_12_1 SELEX + 132380585 132380596 5.0E-06 CGCCCCAGGGCA 12 RREB1_MA0073.1 JASPAR + 132382448 132382467 1.0E-06 ACACAAAACAAAACCCTCAA 20 AR_nuclearreceptor_full_dimeric_17_1 SELEX + 132381225 132381241 4.0E-06 AGGCACACTGTGTCCTG 17 AR_nuclearreceptor_full_dimeric_17_1 SELEX - 132381225 132381241 5.0E-06 CAGGACACAGTGTGCCT 17 Zfx_MA0146.1 JASPAR - 132380508 132380521 2.0E-06 CCAGCCCAGGCCTG 14 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 132382444 132382457 6.0E-06 AAAAACACAAAACA 14 V_SRF_Q6_M00186 TRANSFAC - 132381335 132381348 7.0E-06 TTCCAAACATGGAG 14 V_ZSCAN4_03_M02838 TRANSFAC - 132382558 132382574 1.0E-06 TGTGTGTGCACATATGG 17 V_ZSCAN4_03_M02838 TRANSFAC + 132382559 132382575 0.0E+00 CATATGTGCACACACAG 17 V_MAFK_03_M02776 TRANSFAC + 132381027 132381041 3.0E-06 CCAAAGTGCTGACTA 15 V_FOXA2_04_M02749 TRANSFAC - 132380722 132380738 6.0E-06 GCAATGTCAACAAACAC 17 V_MAFB_05_M02775 TRANSFAC + 132381028 132381044 0.0E+00 CAAAGTGCTGACTAATG 17 V_LRH1_Q5_01_M02098 TRANSFAC - 132380116 132380126 5.0E-06 CTTCAAGGCCA 11 V_GM397_03_M02760 TRANSFAC - 132382558 132382574 3.0E-06 TGTGTGTGCACATATGG 17 V_GM397_03_M02760 TRANSFAC + 132382559 132382575 0.0E+00 CATATGTGCACACACAG 17 V_SP1_Q6_01_M00931 TRANSFAC - 132379068 132379077 4.0E-06 GGGGCGGGGC 10 V_EGR_Q6_M00807 TRANSFAC + 132378737 132378747 6.0E-06 GTGGGGGCGGG 11 V_EGR_Q6_M00807 TRANSFAC - 132381747 132381757 2.0E-06 GTGGGGGCGAG 11 V_P50P50_Q3_M01223 TRANSFAC + 132381439 132381451 2.0E-06 GAGGGACTCCCCC 13 V_GABPA_04_M02858 TRANSFAC + 132381274 132381289 6.0E-06 CCCTCTTCCCACCCCT 16 V_FOXJ1_03_M02750 TRANSFAC - 132380721 132380736 3.0E-06 AATGTCAACAAACACA 16 V_SP1_03_M02281 TRANSFAC + 132379081 132379090 7.0E-06 CCCCGCCCCC 10 V_SP1_03_M02281 TRANSFAC - 132380784 132380793 3.0E-06 CCCCTCCCCC 10 V_AP4_Q6_02_M01860 TRANSFAC + 132381685 132381697 4.0E-06 CCAGCTGCAGGCG 13 V_SRF_C_M00215 TRANSFAC - 132381333 132381347 9.0E-06 TCCAAACATGGAGAG 15 V_ETS_Q4_M00771 TRANSFAC + 132381623 132381634 8.0E-06 TGCCACTTCCTC 12 V_COMP1_01_M00057 TRANSFAC + 132380169 132380192 2.0E-06 CAAGTGCATTAACAAGAAGAACCT 24 V_ZNF219_01_M01122 TRANSFAC + 132379054 132379065 8.0E-06 CACCCCCCCGAC 12 V_GC_01_M00255 TRANSFAC - 132379066 132379079 2.0E-06 ATGGGGCGGGGCCT 14 V_GC_01_M00255 TRANSFAC - 132379130 132379143 3.0E-06 TGAGGGCGGGGCCT 14 V_MYF_01_M01302 TRANSFAC - 132381256 132381267 5.0E-06 AAGCAGCAGGAG 12 V_FKLF_Q5_M01837 TRANSFAC - 132379050 132379059 5.0E-06 GGGGTGGGCG 10 V_FOXO1_02_M00474 TRANSFAC + 132380723 132380736 6.0E-06 TGTTTGTTGACATT 14 V_HNF3G_Q4_M02015 TRANSFAC + 132380723 132380730 7.0E-06 TGTTTGTT 8 V_ZBTB7B_04_M02930 TRANSFAC - 132379625 132379641 6.0E-06 TTGAAGACCACCGCGAA 17 V_XFD3_01_M00269 TRANSFAC - 132380723 132380736 1.0E-06 AATGTCAACAAACA 14 V_KROX_Q6_M00982 TRANSFAC - 132380779 132380792 4.0E-06 CCCTCCCCCGCCCC 14 V_SP1_Q6_M00196 TRANSFAC - 132379067 132379079 8.0E-06 ATGGGGCGGGGCC 13 V_SP1_Q6_M00196 TRANSFAC - 132379131 132379143 9.0E-06 TGAGGGCGGGGCC 13 V_MAZ_Q6_01_M02023 TRANSFAC + 132378687 132378700 3.0E-06 AGGGGAGGGAGGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC + 132378855 132378868 7.0E-06 GAGGGAGGGGAGCA 14 V_HOX13_01_M00023 TRANSFAC - 132381027 132381056 1.0E-05 AGGTCACAGAGCCATTAGTCAGCACTTTGG 30 V_AR_04_M01201 TRANSFAC + 132381226 132381240 5.0E-06 GGCACACTGTGTCCT 15 V_SP1SP3_Q4_M01219 TRANSFAC - 132378771 132378781 1.0E-06 CCGCCCCCTCC 11 V_TAL1BETAE47_01_M00065 TRANSFAC - 132382492 132382507 8.0E-06 GCTTACAGATGGTGAC 16 V_GR_Q6_M00192 TRANSFAC + 132381224 132381242 9.0E-06 CAGGCACACTGTGTCCTGG 19 V_NFKAPPAB50_01_M00051 TRANSFAC - 132381441 132381450 8.0E-06 GGGGAGTCCC 10 V_GRE_C_M00205 TRANSFAC + 132381226 132381241 1.0E-06 GGCACACTGTGTCCTG 16 V_KLF7_03_M02773 TRANSFAC + 132379129 132379144 9.0E-06 CAGGCCCCGCCCTCAT 16 V_MAFK_Q3_M02022 TRANSFAC - 132381032 132381042 3.0E-06 TTAGTCAGCAC 11 V_SRF_Q5_02_M01007 TRANSFAC + 132381332 132381350 9.0E-06 CCTCTCCATGTTTGGAAGC 19 V_AP1_01_M00517 TRANSFAC - 132381033 132381045 5.0E-06 CCATTAGTCAGCA 13 V_FOXO1_Q5_M01216 TRANSFAC + 132382451 132382459 8.0E-06 CAAAACAAA 9 V_TAL1BETAITF2_01_M00070 TRANSFAC - 132382492 132382507 2.0E-06 GCTTACAGATGGTGAC 16 V_BCL6B_04_M02844 TRANSFAC - 132378885 132378900 8.0E-06 TTCCCCGCCCCTTCCC 16 V_SP4_Q5_M01273 TRANSFAC + 132379080 132379090 9.0E-06 TCCCCGCCCCC 11 V_SP4_Q5_M01273 TRANSFAC - 132380778 132380788 7.0E-06 CCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC - 132380784 132380794 5.0E-06 GCCCCTCCCCC 11 V_LRH1_Q5_M01142 TRANSFAC + 132380115 132380126 6.0E-06 CTGGCCTTGAAG 12 V_TTF1_Q5_M02034 TRANSFAC - 132380164 132380177 5.0E-06 ATGCACTTGACGGC 14 V_FAC1_01_M00456 TRANSFAC + 132382441 132382454 9.0E-06 CTCAAAAACACAAA 14 V_FAC1_01_M00456 TRANSFAC + 132382446 132382459 0.0E+00 AAACACAAAACAAA 14 V_TAL1_01_M01591 TRANSFAC + 132381313 132381325 5.0E-06 CTTCCTCCTCTTT 13 V_SMAD4_04_M02898 TRANSFAC + 132381018 132381034 1.0E-06 TCCGCCCCGCCAAAGTG 17 V_FOXL1_02_M02857 TRANSFAC + 132382447 132382462 0.0E+00 AACACAAAACAAAACC 16 V_TAL1ALPHAE47_01_M00066 TRANSFAC - 132382492 132382507 1.0E-06 GCTTACAGATGGTGAC 16 V_FOXL1_04_M02753 TRANSFAC - 132380722 132380738 5.0E-06 GCAATGTCAACAAACAC 17 V_FOXJ3_06_M02855 TRANSFAC + 132382446 132382462 7.0E-06 AAACACAAAACAAAACC 17 V_PLAG1_01_M01778 TRANSFAC + 132378775 132378790 5.0E-06 GGGGCGGAAGGGAGGG 16 V_TCFAP2B_03_M02820 TRANSFAC + 132380584 132380597 8.0E-06 GCGCCCCAGGGCAG 14 V_ZFP161_04_M02933 TRANSFAC + 132379160 132379173 9.0E-06 GGCGCGCAGTGCGG 14 V_FPM315_01_M01587 TRANSFAC + 132378827 132378838 0.0E+00 GAGGGAGGAGGA 12 V_FOXO3_01_M00477 TRANSFAC + 132380723 132380736 2.0E-06 TGTTTGTTGACATT 14 V_ASCL2_04_M02841 TRANSFAC - 132378810 132378825 6.0E-06 TTTTCCCCTTCCCATC 16 V_ASCL2_04_M02841 TRANSFAC + 132381276 132381291 8.0E-06 CTCTTCCCACCCCTTT 16 V_FOXA2_03_M02260 TRANSFAC + 132380727 132380738 4.0E-06 TGTTGACATTGC 12 V_FOXA2_03_M02260 TRANSFAC + 132381056 132381067 6.0E-06 TGTTTACTGAGC 12 V_ZFP281_01_M01597 TRANSFAC + 132380783 132380793 7.0E-06 CGGGGGAGGGG 11 V_RARA_03_M02787 TRANSFAC + 132382484 132382499 7.0E-06 TGTTAGAGGTCACCAT 16 V_SOX2_01_M02246 TRANSFAC + 132378637 132378651 6.0E-06 CCATTCTCCTGTAGA 15 V_HFH3_01_M00289 TRANSFAC + 132380720 132380732 6.0E-06 GTGTGTTTGTTGA 13 V_EWSR1FLI1_01_M02252 TRANSFAC + 132378668 132378685 4.0E-06 GGAAGGAGGGGAACAGGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 132378780 132378797 5.0E-06 GGAAGGGAGGGGGCAGGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 132378821 132378838 3.0E-06 GAAAAGGAGGGAGGAGGA 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 132378854 132378871 3.0E-06 GGAGGGAGGGGAGCAGAG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 132381295 132381312 5.0E-06 GGAGGGAGGAAAGCAGGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 132381296 132381313 1.0E-06 GGGAGGGAGGAAAGCAGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 132381300 132381317 0.0E+00 GGAAGGGAGGGAGGAAAG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 132381304 132381321 6.0E-06 AGGAGGAAGGGAGGGAGG 18 V_VDR_Q3_M00444 TRANSFAC + 132378797 132378811 6.0E-06 GAGGGAGAGAGGTGA 15 V_YY1_01_M00059 TRANSFAC + 132381332 132381348 8.0E-06 CCTCTCCATGTTTGGAA 17 V_FREAC4_01_M00292 TRANSFAC - 132380723 132380738 3.0E-06 GCAATGTCAACAAACA 16 V_SP1_Q2_01_M00933 TRANSFAC - 132378889 132378898 7.0E-06 CCCCGCCCCT 10 V_SP1_Q2_01_M00933 TRANSFAC + 132379081 132379090 4.0E-06 CCCCGCCCCC 10 V_UF1H3BETA_Q6_M01068 TRANSFAC + 132378881 132378894 2.0E-06 GGCGGGGAAGGGGC 14 V_UF1H3BETA_Q6_M01068 TRANSFAC + 132378892 132378905 2.0E-06 GGCGGGGAAGGGGC 14 V_UF1H3BETA_Q6_M01068 TRANSFAC + 132380781 132380794 0.0E+00 GGCGGGGGAGGGGC 14 V_SP1_Q4_01_M00932 TRANSFAC - 132379001 132379013 8.0E-06 AGTGGGTGGGGCC 13 V_SP1_Q4_01_M00932 TRANSFAC - 132379067 132379079 8.0E-06 ATGGGGCGGGGCC 13 V_SP1_Q4_01_M00932 TRANSFAC - 132379131 132379143 8.0E-06 TGAGGGCGGGGCC 13 V_SP1_Q4_01_M00932 TRANSFAC + 132380783 132380795 8.0E-06 CGGGGGAGGGGCC 13 V_FOXK1_03_M02752 TRANSFAC - 132380722 132380738 1.0E-06 GCAATGTCAACAAACAC 17 V_PAX4_04_M00380 TRANSFAC + 132382450 132382479 7.0E-06 ACAAAACAAAACCCTCAAAAAGTTTACCCC 30 V_NANOG_02_M01247 TRANSFAC + 132382442 132382461 1.0E-06 TCAAAAACACAAAACAAAAC 20 V_ER_Q6_M00191 TRANSFAC + 132381040 132381058 4.0E-06 TAATGGCTCTGTGACCTGT 19

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.