Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

FAM172A


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
83989 family with sequence similarity 172, member A chr5 -93446904 - 93452404 93447404

Transcription Factor Binding Sites

 
Download all TFBS in the FAM172A promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
GABPA_MA0062.2 JASPAR - 93447351 93447361 3.0E-06 CCGGAAGTGCA 11
Pax6_MA0069.1 JASPAR - 93449336 93449349 9.0E-06 TTCATTCTTGATTT 14
ELF4_ETS_full_monomeric_12_1 SELEX - 93447353 93447364 2.0E-06 ACCCCGGAAGTG 12
FOXC1_forkhead_DBD_monomeric_11_1 SELEX + 93449294 93449304 4.0E-06 AGAGTAAATAT 11
GMEB2_SAND_DBD_dimer-of-dimers_14_1 SELEX - 93447379 93447392 6.0E-06 TGCGTAATGACGTA 14
XBP1_bZIP_DBD_dimeric_14_1 SELEX + 93447374 93447387 3.0E-06 ATTGATACGTCATT 14
Gfi_MA0038.1 JASPAR - 93449242 93449251 4.0E-06 CAAATCACTC 10
SP4_C2H2_full_monomeric_17_1 SELEX - 93447256 93447272 3.0E-06 AAGGCCACGCCTCCTCC 17
INSM1_MA0155.1 JASPAR - 93447224 93447235 9.0E-06 TGGCTGGGGGCA 12
PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 93447309 93447323 5.0E-06 CGAGAGGGAAAGTCA 15
DUXA_homeodomain_DBD_dimeric_13_1 SELEX - 93447718 93447730 8.0E-06 TAAATTTAATCTT 13
ELF1_ETS_full_monomeric_12_1 SELEX - 93447353 93447364 2.0E-06 ACCCCGGAAGTG 12
TEAD1_TEA_full_dimeric_17_1 SELEX - 93447600 93447616 9.0E-06 GAATAGTTAAAATTCCG 17
FOXB1_forkhead_DBD_monomeric_11_1 SELEX + 93449294 93449304 3.0E-06 AGAGTAAATAT 11
V_MEQ_01_M02049 TRANSFAC + 93446987 93446995 7.0E-06 AACACACAC 9
V_TEL1_02_M02070 TRANSFAC - 93447353 93447362 5.0E-06 CCCGGAAGTG 10
V_OBOX5_05_M03066 TRANSFAC + 93447714 93447730 7.0E-06 TCGGAAGATTAAATTTA 17
V_FOXA2_04_M02749 TRANSFAC + 93449292 93449308 1.0E-05 AAAGAGTAAATATCCTT 17
V_EVI1_04_M00081 TRANSFAC - 93449302 93449316 9.0E-06 GGACTTGAAAGGATA 15
V_NERF_01_M01976 TRANSFAC - 93447353 93447362 9.0E-06 CCCGGAAGTG 10
V_MMEF2_Q6_M00405 TRANSFAC + 93447718 93447733 3.0E-06 AAGATTAAATTTACCT 16
V_SPDEF_04_M02915 TRANSFAC + 93449297 93449312 9.0E-06 GTAAATATCCTTTCAA 16
V_FOXJ1_04_M02854 TRANSFAC - 93447300 93447314 3.0E-06 AAGTCATAACAACCG 15
V_GABP_B_M00341 TRANSFAC - 93447351 93447362 0.0E+00 CCCGGAAGTGCA 12
V_PRX2_Q2_M02115 TRANSFAC - 93449219 93449227 7.0E-06 TTAAAGTAA 9
V_ELF2_02_M02054 TRANSFAC - 93447353 93447362 8.0E-06 CCCGGAAGTG 10
V_OBOX5_02_M01480 TRANSFAC + 93447714 93447730 7.0E-06 TCGGAAGATTAAATTTA 17
V_ETV7_01_M02071 TRANSFAC + 93447416 93447425 1.0E-05 CCCGGAAACG 10
V_CEBPE_Q6_M01868 TRANSFAC + 93449326 93449339 8.0E-06 TAAGATGTCAAAAT 14
V_GFI1_01_M00250 TRANSFAC - 93449234 93449257 1.0E-06 GAAAAACAAATCACTCCAAAATTT 24
V_XFD3_01_M00269 TRANSFAC + 93449294 93449307 3.0E-06 AGAGTAAATATCCT 14
V_AMEF2_Q6_M00403 TRANSFAC + 93447718 93447735 2.0E-06 AAGATTAAATTTACCTTT 18
V_HMX1_01_M00433 TRANSFAC - 93447387 93447396 2.0E-06 CAAGTGCGTA 10
V_OBOX2_01_M01364 TRANSFAC + 93447713 93447729 5.0E-06 TTCGGAAGATTAAATTT 17
V_E4F1_Q6_01_M02091 TRANSFAC - 93447377 93447386 7.0E-06 ATGACGTATC 10
V_GADP_01_M01258 TRANSFAC + 93447353 93447364 3.0E-06 CACTTCCGGGGT 12
V_ERBETA_Q5_M01875 TRANSFAC - 93447570 93447584 8.0E-06 TTTAGAGTGGCCTCG 15
V_ISGF3G_03_M02771 TRANSFAC + 93449258 93449272 5.0E-06 AGCAAAAGAAACTAA 15
V_STAF_02_M00264 TRANSFAC - 93447015 93447035 6.0E-06 AGGTCCCATGTTCCATTTCCA 21
V_TEL1_01_M01993 TRANSFAC - 93447353 93447362 5.0E-06 CCCGGAAGTG 10
V_OCT4_02_M01124 TRANSFAC - 93449254 93449268 5.0E-06 TTTCTTTTGCTGAAA 15
V_INSM1_01_M02268 TRANSFAC - 93447224 93447235 9.0E-06 TGGCTGGGGGCA 12
V_ELF4_01_M01979 TRANSFAC - 93447353 93447362 4.0E-06 CCCGGAAGTG 10
V_BLIMP1_Q6_M01066 TRANSFAC - 93447309 93447324 5.0E-06 CCGAGAGGGAAAGTCA 16
V_AP1_Q2_01_M00924 TRANSFAC + 93450117 93450128 9.0E-06 TGACTTAAATTT 12
V_FOXO1_Q5_M01216 TRANSFAC - 93449248 93449256 1.0E-06 AAAAACAAA 9
V_HAND1E47_01_M00222 TRANSFAC + 93450101 93450116 3.0E-06 AATGAGGTCTGGATTC 16
V_OBOX2_02_M03064 TRANSFAC + 93447713 93447729 5.0E-06 TTCGGAAGATTAAATTT 17
V_GFI1B_01_M01058 TRANSFAC - 93449240 93449251 2.0E-06 CAAATCACTCCA 12
V_ELF_02_M02053 TRANSFAC - 93447353 93447362 1.0E-05 CCCGGAAGTG 10
V_FOXO4_01_M00472 TRANSFAC - 93449246 93449256 3.0E-06 AAAAACAAATC 11
V_OBOX3_02_M03065 TRANSFAC + 93447713 93447729 7.0E-06 TTCGGAAGATTAAATTT 17
V_OBOX3_01_M01466 TRANSFAC + 93447713 93447729 7.0E-06 TTCGGAAGATTAAATTT 17
V_PAX4_04_M00380 TRANSFAC - 93450099 93450128 6.0E-06 AAATTTAAGTCAGAATCCAGACCTCATTCT 30
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL