Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

TSSK6 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 83983 testis-specific serine kinase 6 chr19 - 19625969 - 19631469 19626469 Transcription Factor Binding Sites   Download all TFBS in the TSSK6 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR + 19626555 19626573 6.0E-06 TCACCACCAGGGAGCAGAA 19 Rxrb_nuclearreceptor_DBD_dimeric_14_1 SELEX + 19627053 19627066 4.0E-06 GGCGTCAAAGGTGA 14 FLI1_ETS_full_monomeric_10_1 SELEX + 19627023 19627032 2.0E-06 ACCGGAAGTG 10 ETV5_ETS_DBD_monomeric_10_1 SELEX + 19627023 19627032 3.0E-06 ACCGGAAGTG 10 ERG_ETS_full_monomeric_10_1 SELEX + 19627023 19627032 1.0E-06 ACCGGAAGTG 10 ETV3_ETS_DBD_monomeric_10_1 SELEX + 19627023 19627032 1.0E-06 ACCGGAAGTG 10 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 19627899 19627915 2.0E-06 TTAAACATTTGAAAACT 17 FEV_ETS_DBD_monomeric_10_1 SELEX + 19627023 19627032 2.0E-06 ACCGGAAGTG 10 RXRG_nuclearreceptor_full_dimeric_14_1 SELEX + 19627053 19627066 7.0E-06 GGCGTCAAAGGTGA 14 NR2F6_nuclearreceptor_full_dimeric_14_1 SELEX + 19627053 19627066 9.0E-06 GGCGTCAAAGGTGA 14 EWSR1-FLI1_MA0149.1 JASPAR + 19625268 19625285 0.0E+00 GGAAGAAAGGGAGGGAAG 18 ETV1_ETS_DBD_monomeric_10_1 SELEX + 19627023 19627032 2.0E-06 ACCGGAAGTG 10 SOX8_HMG_DBD_dimeric_14_1 SELEX + 19626510 19626523 8.0E-06 TGAATGGTCAGTTT 14 ETV2_ETS_DBD_monomeric_11_1 SELEX + 19627022 19627032 1.0E-05 GACCGGAAGTG 11 ETS1_ETS_full_monomeric_10_1 SELEX + 19627023 19627032 3.0E-06 ACCGGAAGTG 10 SP1_MA0079.2 JASPAR - 19627191 19627200 7.0E-06 CCCCGCCCCC 10 NR2F1_nuclearreceptor_DBD_dimeric_15_1 SELEX + 19627053 19627067 4.0E-06 GGCGTCAAAGGTGAA 15 ETV4_ETS_DBD_monomeric_10_1 SELEX + 19627023 19627032 4.0E-06 ACCGGAAGTG 10 ELK4_ETS_DBD_monomeric_10_1 SELEX + 19627023 19627032 2.0E-06 ACCGGAAGTG 10 ELK4_MA0076.1 JASPAR + 19627023 19627031 4.0E-06 ACCGGAAGT 9 SP4_C2H2_full_monomeric_17_1 SELEX - 19621478 19621494 9.0E-06 CAGGACCCGCCCCTTGA 17 SP1_C2H2_DBD_monomeric_11_1 SELEX - 19627191 19627201 4.0E-06 ACCCCGCCCCC 11 YY2_C2H2_full_monomeric_11_1 SELEX - 19626988 19626998 9.0E-06 ACCGCCATGAT 11 ERF_ETS_DBD_monomeric_10_1 SELEX + 19627023 19627032 1.0E-06 ACCGGAAGTG 10 ELK1_ETS_full_monomeric_10_1 SELEX + 19627023 19627032 2.0E-06 ACCGGAAGTG 10 JDP2_bZIP_full_dimeric_9_1 SELEX - 19626493 19626501 1.0E-05 ATGAGTCAC 9 HOXA13_homeodomain_full_monomeric_11_1 SELEX - 19627514 19627524 9.0E-06 TCTTGTAAATT 11 GABPA_ETS_full_monomeric_10_1 SELEX + 19627023 19627032 2.0E-06 ACCGGAAGTG 10 Elk3_ETS_DBD_monomeric_10_1 SELEX + 19627023 19627032 2.0E-06 ACCGGAAGTG 10 ETV6_ETS_full_monomeric_10_1 SELEX - 19627009 19627018 9.0E-06 GGCGGAAGTG 10 ETV6_ETS_full_monomeric_10_1 SELEX + 19627023 19627032 3.0E-06 ACCGGAAGTG 10 ETV6_ETS_full_dimeric_15_1 SELEX + 19625279 19625293 7.0E-06 AGGGAAGCGGAAGGG 15 ETV6_ETS_full_dimeric_15_1 SELEX + 19627018 19627032 1.0E-06 CCGGGACCGGAAGTG 15 NRF1_NRF_full_dimeric_12_1 SELEX + 19625193 19625204 1.0E-06 TGCGCATGCGCC 12 NRF1_NRF_full_dimeric_12_1 SELEX - 19625193 19625204 6.0E-06 GGCGCATGCGCA 12 NRF1_NRF_full_dimeric_12_1 SELEX - 19625298 19625309 5.0E-06 TGCACATGCGCT 12 RXRA_nuclearreceptor_full_dimeric_14_1 SELEX + 19627053 19627066 7.0E-06 GGCGTCAAAGGTGA 14 V_ERG_03_M02062 TRANSFAC + 19627023 19627032 2.0E-06 ACCGGAAGTG 10 V_ERM_01_M01992 TRANSFAC + 19627023 19627032 3.0E-06 ACCGGAAGTG 10 V_NFKB_C_M00208 TRANSFAC + 19627510 19627521 8.0E-06 AGGGAATTTACA 12 V_SAP1A_01_M01167 TRANSFAC + 19627022 19627032 3.0E-06 GACCGGAAGTG 11 V_ELK1_04_M01165 TRANSFAC + 19627022 19627032 1.0E-06 GACCGGAAGTG 11 V_AR_02_M00953 TRANSFAC + 19627510 19627536 2.0E-06 AGGGAATTTACAAGATGTTCTATGCAG 27 V_GABPA_02_M02074 TRANSFAC + 19627023 19627032 8.0E-06 ACCGGAAGTG 10 V_ATF5_01_M01295 TRANSFAC + 19627322 19627332 4.0E-06 CCTCTTCCTTC 11 V_CETS1_01_M01986 TRANSFAC + 19627023 19627032 4.0E-06 ACCGGAAGTG 10 V_AR_Q6_01_M01996 TRANSFAC + 19627517 19627531 3.0E-06 TTACAAGATGTTCTA 15 V_ETV3_01_M01990 TRANSFAC + 19627023 19627032 3.0E-06 ACCGGAAGTG 10 V_GABP_B_M00341 TRANSFAC + 19627023 19627034 3.0E-06 ACCGGAAGTGTG 12 V_SP1_Q6_01_M00931 TRANSFAC + 19627192 19627201 7.0E-06 GGGGCGGGGT 10 V_GATA1_03_M00127 TRANSFAC - 19626497 19626510 3.0E-06 AGGATGATTATGAG 14 V_PLAG1_02_M01973 TRANSFAC - 19626703 19626718 0.0E+00 CCCCAGTTAAGGCCCC 16 V_SP1_03_M02281 TRANSFAC - 19627191 19627200 7.0E-06 CCCCGCCCCC 10 V_AP2_Q6_M00189 TRANSFAC - 19627082 19627093 4.0E-06 AGCCCCCCGGCG 12 V_CETS2_02_M02064 TRANSFAC + 19627023 19627032 6.0E-06 ACCGGAAGTG 10 V_PEA3_01_M01991 TRANSFAC + 19627023 19627032 2.0E-06 ACCGGAAGTG 10 V_AR_03_M00956 TRANSFAC + 19627510 19627536 4.0E-06 AGGGAATTTACAAGATGTTCTATGCAG 27 V_BACH1_01_M00495 TRANSFAC - 19626490 19626504 9.0E-06 ATTATGAGTCACAAA 15 V_FLI1_01_M02038 TRANSFAC + 19627023 19627032 2.0E-06 ACCGGAAGTG 10 V_GC_01_M00255 TRANSFAC + 19621480 19621493 3.0E-06 AAGGGGCGGGTCCT 14 V_ELK1_06_M02059 TRANSFAC + 19627023 19627032 3.0E-06 ACCGGAAGTG 10 V_ELK1_05_M01981 TRANSFAC + 19627023 19627032 5.0E-06 ACCGGAAGTG 10 V_PR_01_M00954 TRANSFAC + 19627510 19627536 3.0E-06 AGGGAATTTACAAGATGTTCTATGCAG 27 V_SAP1A_02_M01983 TRANSFAC + 19627023 19627032 3.0E-06 ACCGGAAGTG 10 V_FLI1_02_M02073 TRANSFAC + 19627023 19627032 5.0E-06 ACCGGAAGTG 10 V_PET1_02_M02072 TRANSFAC + 19627023 19627032 6.0E-06 ACCGGAAGTG 10 V_TEF_Q6_M00672 TRANSFAC + 19627908 19627919 1.0E-06 ATGTTTAAGTAA 12 V_ERF_01_M01984 TRANSFAC + 19627023 19627032 3.0E-06 ACCGGAAGTG 10 V_KROX_Q6_M00982 TRANSFAC - 19627186 19627199 5.0E-06 CCCGCCCCCGAGCC 14 V_ER81_02_M02065 TRANSFAC + 19627023 19627032 2.0E-06 ACCGGAAGTG 10 V_SP1_Q6_M00196 TRANSFAC + 19627190 19627202 3.0E-06 CGGGGGCGGGGTT 13 V_ZF5_B_M00333 TRANSFAC - 19625341 19625353 2.0E-06 AAGAGGCGCGCTT 13 V_ERG_01_M01752 TRANSFAC + 19627023 19627031 4.0E-06 ACCGGAAGT 9 V_HMX1_01_M00433 TRANSFAC - 19625820 19625829 8.0E-06 CAAGTGCGAA 10 V_GABPA_01_M02039 TRANSFAC + 19627023 19627032 3.0E-06 ACCGGAAGTG 10 V_TTF1_Q6_M00794 TRANSFAC + 19626964 19626975 8.0E-06 ATCTCAAGTGCT 12 V_NKX22_02_M01372 TRANSFAC - 19626962 19626978 7.0E-06 GGAAGCACTTGAGATGG 17 V_CETS2_01_M01989 TRANSFAC + 19627023 19627032 3.0E-06 ACCGGAAGTG 10 V_GADP_01_M01258 TRANSFAC - 19627021 19627032 1.0E-06 CACTTCCGGTCC 12 V_JUNDM2_04_M02876 TRANSFAC + 19626489 19626504 1.0E-06 CTTTGTGACTCATAAT 16 V_JUNDM2_04_M02876 TRANSFAC - 19626490 19626505 0.0E+00 GATTATGAGTCACAAA 16 V_PET1_01_M02037 TRANSFAC + 19627023 19627032 3.0E-06 ACCGGAAGTG 10 V_GR_01_M00955 TRANSFAC + 19627510 19627536 1.0E-06 AGGGAATTTACAAGATGTTCTATGCAG 27 V_ERBETA_Q5_M01875 TRANSFAC - 19627138 19627152 4.0E-06 GTGATACTGACCCGA 15 V_OCAB_Q6_M02113 TRANSFAC - 19625323 19625333 9.0E-06 ATATGCGAAGC 11 V_NCX_02_M01420 TRANSFAC - 19627898 19627914 5.0E-06 TAAACATTTGAAAACTT 17 V_CETS1P54_01_M00032 TRANSFAC + 19627023 19627032 5.0E-06 ACCGGAAGTG 10 V_SP1_01_M00008 TRANSFAC + 19627192 19627201 3.0E-06 GGGGCGGGGT 10 V_PEA3_02_M02066 TRANSFAC + 19627023 19627032 2.0E-06 ACCGGAAGTG 10 V_ERF_02_M02061 TRANSFAC + 19627023 19627032 3.0E-06 ACCGGAAGTG 10 V_CTCF_01_M01200 TRANSFAC + 19626554 19626573 6.0E-06 ATCACCACCAGGGAGCAGAA 20 V_ER71_01_M01988 TRANSFAC + 19627023 19627032 5.0E-06 ACCGGAAGTG 10 V_NET_01_M01982 TRANSFAC + 19627023 19627032 3.0E-06 ACCGGAAGTG 10 V_ER81_01_M01987 TRANSFAC + 19627023 19627032 3.0E-06 ACCGGAAGTG 10 V_ERM_02_M02069 TRANSFAC + 19627023 19627032 3.0E-06 ACCGGAAGTG 10 V_TTF1_Q5_M02034 TRANSFAC - 19626963 19626976 1.0E-06 AAGCACTTGAGATG 14 V_POU5F1_01_M01307 TRANSFAC + 19626798 19626807 9.0E-06 AATGCAAGAA 10 V_GABPBETA_Q3_M01876 TRANSFAC + 19625284 19625294 7.0E-06 AGCGGAAGGGA 11 NR1H2_RXRA_MA0115.1 JASPAR + 19627052 19627068 4.0E-06 CGGCGTCAAAGGTGAAG 17 V_ZFP206_01_M01742 TRANSFAC + 19625124 19625134 4.0E-06 CGCGCAGGCGC 11 V_ZFP206_01_M01742 TRANSFAC - 19625125 19625135 8.0E-06 TGCGCCTGCGC 11 V_ZFP206_01_M01742 TRANSFAC + 19625193 19625203 0.0E+00 TGCGCATGCGC 11 V_ZFP206_01_M01742 TRANSFAC + 19625353 19625363 7.0E-06 TGCGCGTGCGC 11 V_NKX22_01_M00485 TRANSFAC + 19626967 19626976 6.0E-06 TCAAGTGCTT 10 V_NRF2_01_M00108 TRANSFAC + 19627023 19627032 2.0E-06 ACCGGAAGTG 10 V_OSR2_03_M02785 TRANSFAC - 19627268 19627283 9.0E-06 TATTACAGAAGCTATG 16 V_NRF1_Q6_M00652 TRANSFAC - 19625193 19625202 2.0E-06 CGCATGCGCA 10 V_SAP1A_03_M02058 TRANSFAC + 19627023 19627032 2.0E-06 ACCGGAAGTG 10 V_CETS1_02_M02063 TRANSFAC + 19627023 19627032 3.0E-06 ACCGGAAGTG 10 V_EWSR1FLI1_01_M02252 TRANSFAC + 19625268 19625285 0.0E+00 GGAAGAAAGGGAGGGAAG 18 V_NET_02_M02060 TRANSFAC + 19627023 19627032 4.0E-06 ACCGGAAGTG 10 V_PR_02_M00957 TRANSFAC + 19627510 19627536 0.0E+00 AGGGAATTTACAAGATGTTCTATGCAG 27 V_ERG_02_M01985 TRANSFAC + 19627023 19627032 2.0E-06 ACCGGAAGTG 10 V_SP1_Q2_01_M00933 TRANSFAC - 19627191 19627200 4.0E-06 CCCCGCCCCC 10 V_SP1_Q4_01_M00932 TRANSFAC + 19627190 19627202 6.0E-06 CGGGGGCGGGGTT 13 V_ELK1_03_M01163 TRANSFAC + 19627022 19627032 1.0E-06 GACCGGAAGTG 11 V_ER71_02_M02067 TRANSFAC + 19627023 19627032 3.0E-06 ACCGGAAGTG 10 V_ETV3_02_M02068 TRANSFAC + 19627023 19627032 2.0E-06 ACCGGAAGTG 10 V_PPARG_01_M00512 TRANSFAC + 19627050 19627070 3.0E-06 GGCGGCGTCAAAGGTGAAGCA 21

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.