Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

NME5 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 8382 NME/NM23 family member 5 chr5 - 137474632 - 137480132 137475132 Transcription Factor Binding Sites   Download all TFBS in the NME5 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints PITX3_homeodomain_DBD_monomeric_9_1 SELEX + 137477713 137477721 5.0E-06 CTTAATCCC 9 HSFY2_HSF_DBD_dimer-of-dimers_15_1 SELEX + 137475495 137475509 1.0E-06 TTAGAAAAGATCTAA 15 POU2F1_POU_DBD_dimeric_14_1 SELEX + 137474273 137474286 6.0E-06 TTTACATAAGCATT 14 POU2F1_POU_DBD_dimeric_14_1 SELEX - 137474273 137474286 6.0E-06 AATGCTTATGTAAA 14 SPIC_ETS_full_monomeric_14_1 SELEX - 137475580 137475593 4.0E-06 AAAAAGGGGAAGCT 14 POU5F1P1_POU_DBD_monomeric_9_1 SELEX - 137474272 137474280 3.0E-06 TATGTAAAT 9 POU2F3_POU_DBD_monomeric_9_1 SELEX - 137474272 137474280 4.0E-06 TATGTAAAT 9 NFIX_NFI_full_dimeric_15_2 SELEX + 137475560 137475574 4.0E-06 ATGGCATAAATCCAA 15 NFIX_NFI_full_dimeric_15_2 SELEX - 137475560 137475574 5.0E-06 TTGGATTTATGCCAT 15 POU1F1_POU_DBD_monomeric_14_1 SELEX - 137474269 137474282 3.0E-06 CTTATGTAAATGTG 14 POU1F1_POU_DBD_monomeric_14_1 SELEX + 137475364 137475377 1.0E-06 TATATGTAAATGAC 14 POU2F2_POU_DBD_monomeric_11_1 SELEX - 137474271 137474281 2.0E-06 TTATGTAAATG 11 POU2F2_POU_DBD_monomeric_11_1 SELEX + 137475365 137475375 1.0E-06 ATATGTAAATG 11 POU3F4_POU_DBD_monomeric_9_1 SELEX - 137474272 137474280 4.0E-06 TATGTAAAT 9 SCRT2_C2H2_DBD_monomeric_13_1 SELEX - 137475084 137475096 5.0E-06 TAGCAACAAGTTG 13 Pou2f2_POU_DBD_monomeric_9_1 SELEX - 137474272 137474280 5.0E-06 TATGTAAAT 9 SPIB_ETS_DBD_monomeric_14_1 SELEX - 137475580 137475593 1.0E-06 AAAAAGGGGAAGCT 14 PITX1_homeodomain_full_monomeric_8_1 SELEX + 137477714 137477721 1.0E-05 TTAATCCC 8 RFX2_RFX_DBD_dimeric_15_1 SELEX + 137475089 137475103 1.0E-05 TGTTGCTAGGAGACC 15 POU3F3_POU_DBD_monomeric_13_1 SELEX - 137474270 137474282 5.0E-06 CTTATGTAAATGT 13 POU3F3_POU_DBD_monomeric_13_1 SELEX + 137475364 137475376 1.0E-06 TATATGTAAATGA 13 POU2F3_POU_DBD_dimeric_12_1 SELEX - 137474274 137474285 9.0E-06 ATGCTTATGTAA 12 FOXG1_forkhead_DBD_putatively-multimeric_12_1 SELEX - 137475601 137475612 8.0E-06 GTGGACATAATA 12 RFX3_RFX_DBD_dimeric_15_1 SELEX + 137475089 137475103 1.0E-06 TGTTGCTAGGAGACC 15 SOX7_HMG_full_dimeric_16_1 SELEX + 137477728 137477743 6.0E-06 AACAGTATTAAGAGGT 16 SCRT1_C2H2_DBD_monomeric_15_1 SELEX - 137475082 137475096 3.0E-06 TAGCAACAAGTTGTA 15 SOX14_HMG_DBD_dimeric_12_1 SELEX - 137475507 137475518 4.0E-06 ACAATTCCATTA 12 RFX4_RFX_DBD_dimeric_15_1 SELEX + 137475089 137475103 2.0E-06 TGTTGCTAGGAGACC 15 POU3F1_POU_DBD_monomeric_12_1 SELEX - 137474270 137474281 1.0E-06 TTATGTAAATGT 12 POU3F1_POU_DBD_monomeric_12_1 SELEX + 137475365 137475376 1.0E-06 ATATGTAAATGA 12 RHOXF1_homeodomain_full_monomeric_8_1 SELEX + 137477714 137477721 1.0E-05 TTAATCCC 8 Pou5f1_MA0142.1 JASPAR - 137474272 137474286 8.0E-06 AATGCTTATGTAAAT 15 POU2F1_POU_DBD_monomeric_12_1 SELEX - 137474271 137474282 3.0E-06 CTTATGTAAATG 12 POU2F1_POU_DBD_monomeric_12_1 SELEX + 137475364 137475375 2.0E-06 TATATGTAAATG 12 FOXI1_forkhead_full_dimeric_17_1 SELEX - 137475598 137475614 1.0E-05 ATGTGGACATAATATAA 17 MAFK_bZIP_full_monomeric_12_1 SELEX - 137474278 137474289 8.0E-06 AAAAATGCTTAT 12 SPI1_ETS_full_monomeric_14_1 SELEX - 137475580 137475593 1.0E-06 AAAAAGGGGAAGCT 14 POU3F3_POU_DBD_dimeric_12_1 SELEX + 137474274 137474285 7.0E-06 TTACATAAGCAT 12 POU3F2_POU_DBD_monomeric_12_1 SELEX - 137474270 137474281 1.0E-06 TTATGTAAATGT 12 POU3F2_POU_DBD_monomeric_12_1 SELEX + 137475365 137475376 1.0E-06 ATATGTAAATGA 12 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 137475589 137475601 6.0E-06 ATAAAGAAAAAAA 13 FOXB1_forkhead_DBD_monomeric_11_1 SELEX - 137474270 137474280 8.0E-06 TATGTAAATGT 11 NFE2L2_MA0150.1 JASPAR + 137477588 137477598 4.0E-06 ATGACCAAGCA 11 V_SPI1_01_M01203 TRANSFAC - 137475577 137475593 1.0E-06 AAAAAGGGGAAGCTGAG 17 V_CDX2_Q5_01_M01659 TRANSFAC - 137475554 137475564 7.0E-06 GCCATAAATGT 11 V_APOLYA_B_M00310 TRANSFAC + 137474222 137474236 9.0E-06 AATAAACTTAAATTT 15 V_OBOX5_05_M03066 TRANSFAC - 137477709 137477725 9.0E-06 ACTTGGGATTAAGTTTC 17 V_BACH2_01_M00490 TRANSFAC + 137474315 137474325 9.0E-06 CATGAATCATC 11 V_MAFK_03_M02776 TRANSFAC - 137474276 137474290 2.0E-06 AAAAAATGCTTATGT 15 V_ALX4_01_M00619 TRANSFAC + 137474362 137474374 8.0E-06 TCTAAGAATAATA 13 V_NF1_Q6_01_M00806 TRANSFAC - 137475558 137475574 9.0E-06 TTGGATTTATGCCATAA 17 V_NF1A_Q6_M02103 TRANSFAC - 137475559 137475574 1.0E-06 TTGGATTTATGCCATA 16 V_HMGIY_Q3_M01010 TRANSFAC + 137474279 137474293 2.0E-06 TAAGCATTTTTTTTT 15 V_MAFB_05_M02775 TRANSFAC - 137474273 137474289 8.0E-06 AAAAATGCTTATGTAAA 17 V_MMEF2_Q6_M00405 TRANSFAC - 137474227 137474242 7.0E-06 AGCATTAAATTTAAGT 16 V_GATA3_03_M00351 TRANSFAC + 137475500 137475509 1.0E-06 AAAGATCTAA 10 V_STAT_Q6_M00777 TRANSFAC - 137474362 137474374 1.0E-05 TATTATTCTTAGA 13 V_POU5F1_02_M02245 TRANSFAC - 137474272 137474286 8.0E-06 AATGCTTATGTAAAT 15 V_SATB1_Q3_M01723 TRANSFAC - 137475513 137475528 1.0E-06 TGATTTAAAGACAATT 16 V_SATB1_Q3_M01723 TRANSFAC - 137475590 137475605 3.0E-06 TAATATAAAGAAAAAA 16 V_FOXJ2_02_M00423 TRANSFAC - 137477728 137477741 7.0E-06 CTCTTAATACTGTT 14 V_MEF2_02_M00231 TRANSFAC + 137474356 137474377 4.0E-06 TCCGGATCTAAGAATAATATCT 22 V_MEF2_02_M00231 TRANSFAC - 137475470 137475491 1.0E-06 TTTTACTCTATAAATAAATGTA 22 V_OCT1_01_M00135 TRANSFAC - 137474267 137474285 2.0E-06 ATGCTTATGTAAATGTGCC 19 V_OCT1_01_M00135 TRANSFAC + 137475361 137475379 7.0E-06 CGGTATATGTAAATGACCC 19 V_POU2F3_01_M01476 TRANSFAC - 137474268 137474283 7.0E-06 GCTTATGTAAATGTGC 16 V_POU2F3_01_M01476 TRANSFAC + 137475363 137475378 4.0E-06 GTATATGTAAATGACC 16 V_POU3F2_02_M00464 TRANSFAC - 137474272 137474281 9.0E-06 TTATGTAAAT 10 V_PU1_Q4_M01172 TRANSFAC + 137475574 137475592 0.0E+00 AACCTCAGCTTCCCCTTTT 19 V_PU1_Q4_M01172 TRANSFAC + 137477605 137477623 1.0E-06 AGCTTTAGTTTCCTCATTC 19 V_TCFAP2E_04_M02926 TRANSFAC - 137474283 137474296 9.0E-06 TTAAAAAAAAAATG 14 V_TCFAP2E_04_M02926 TRANSFAC - 137474286 137474299 2.0E-06 CCCTTAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 137475588 137475601 8.0E-06 ATAAAGAAAAAAAG 14 V_ELF4_04_M02850 TRANSFAC - 137474282 137474298 0.0E+00 CCTTAAAAAAAAAATGC 17 V_ELF4_04_M02850 TRANSFAC - 137474284 137474300 4.0E-06 GCCCTTAAAAAAAAAAT 17 V_SOX13_03_M02797 TRANSFAC + 137474363 137474378 6.0E-06 CTAAGAATAATATCTT 16 V_SOX7_03_M02807 TRANSFAC - 137475505 137475526 2.0E-06 ATTTAAAGACAATTCCATTAGA 22 V_OBOX5_02_M01480 TRANSFAC - 137477709 137477725 9.0E-06 ACTTGGGATTAAGTTTC 17 V_ZFP105_03_M02827 TRANSFAC - 137474283 137474297 3.0E-06 CTTAAAAAAAAAATG 15 V_ZFP105_03_M02827 TRANSFAC - 137475588 137475602 4.0E-06 TATAAAGAAAAAAAG 15 V_BEL1_B_M00312 TRANSFAC - 137474261 137474288 3.0E-06 AAAATGCTTATGTAAATGTGCCTACCCA 28 V_BEL1_B_M00312 TRANSFAC - 137477621 137477648 9.0E-06 AAACAGCAGAGACAAACTTCTTTAGGAA 28 V_TEF_Q6_M00672 TRANSFAC - 137474274 137474285 2.0E-06 ATGCTTATGTAA 12 V_SPDEF_03_M02811 TRANSFAC - 137474351 137474366 7.0E-06 TTAGATCCGGATTCAC 16 V_RFX1_01_M00280 TRANSFAC - 137475088 137475104 7.0E-06 AGGTCTCCTAGCAACAA 17 V_SOX_Q6_M01014 TRANSFAC - 137475534 137475546 7.0E-06 ATCTTTGTTCCAT 13 V_MEF2_03_M00232 TRANSFAC - 137475470 137475491 1.0E-06 TTTTACTCTATAAATAAATGTA 22 V_RFXDC2_03_M02790 TRANSFAC - 137475087 137475101 9.0E-06 TCTCCTAGCAACAAG 15 V_OCT1_04_M00138 TRANSFAC - 137474265 137474287 3.0E-06 AAATGCTTATGTAAATGTGCCTA 23 V_OCT1_04_M00138 TRANSFAC - 137474271 137474293 2.0E-06 AAAAAAAAATGCTTATGTAAATG 23 V_EVI1_Q3_M02002 TRANSFAC + 137474373 137474381 4.0E-06 TATCTTGTA 9 V_SOX12_04_M02900 TRANSFAC - 137475592 137475607 8.0E-06 CATAATATAAAGAAAA 16 V_MEF2_04_M00233 TRANSFAC - 137475470 137475491 4.0E-06 TTTTACTCTATAAATAAATGTA 22 V_POU6F1_01_M00465 TRANSFAC + 137475551 137475561 8.0E-06 GCAACATTTAT 11 V_TBP_06_M02814 TRANSFAC - 137475593 137475608 9.0E-06 ACATAATATAAAGAAA 16 V_OCT_Q6_M00795 TRANSFAC + 137474270 137474280 6.0E-06 ACATTTACATA 11 V_MTF1_06_M02882 TRANSFAC - 137474285 137474298 1.0E-05 CCTTAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC - 137475589 137475602 6.0E-06 TATAAAGAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC - 137475590 137475603 8.0E-06 ATATAAAGAAAAAA 14 V_OCT2_01_M01368 TRANSFAC - 137474268 137474283 7.0E-06 GCTTATGTAAATGTGC 16 V_OCT2_01_M01368 TRANSFAC + 137475363 137475378 4.0E-06 GTATATGTAAATGACC 16 V_OCT1_Q6_M00195 TRANSFAC + 137475363 137475377 1.0E-06 GTATATGTAAATGAC 15 V_NKX3A_02_M01383 TRANSFAC - 137475045 137475061 7.0E-06 AGGTGAGTACTTAGAGA 17 V_DOBOX5_01_M01463 TRANSFAC - 137477709 137477725 7.0E-06 ACTTGGGATTAAGTTTC 17 V_NRF2_Q4_M00821 TRANSFAC - 137474315 137474327 1.0E-06 ATGATGATTCATG 13 V_PITX2_Q2_M00482 TRANSFAC + 137477713 137477723 4.0E-06 CTTAATCCCAA 11 V_SRF_06_M02916 TRANSFAC - 137474280 137474296 2.0E-06 TTAAAAAAAAAATGCTT 17 V_SRF_06_M02916 TRANSFAC - 137474281 137474297 0.0E+00 CTTAAAAAAAAAATGCT 17 V_SRF_06_M02916 TRANSFAC - 137474282 137474298 0.0E+00 CCTTAAAAAAAAAATGC 17 V_SRF_06_M02916 TRANSFAC - 137475587 137475603 8.0E-06 ATATAAAGAAAAAAAGG 17 V_SOX18_04_M02905 TRANSFAC - 137474226 137474241 2.0E-06 GCATTAAATTTAAGTT 16 V_FOXO1_04_M01969 TRANSFAC - 137474278 137474297 8.0E-06 CTTAAAAAAAAAATGCTTAT 20 V_RFX3_04_M02788 TRANSFAC - 137475083 137475105 3.0E-06 CAGGTCTCCTAGCAACAAGTTGT 23 V_PIT1_Q6_M00802 TRANSFAC + 137477699 137477716 1.0E-06 AATTCATGTTGAAACTTA 18 V_SOX15_04_M02903 TRANSFAC + 137474224 137474238 5.0E-06 TAAACTTAAATTTAA 15 V_NFE2L2_01_M02263 TRANSFAC + 137477588 137477598 4.0E-06 ATGACCAAGCA 11 V_HOXA10_01_M01464 TRANSFAC - 137475594 137475609 9.0E-06 GACATAATATAAAGAA 16 V_SOX5_07_M02909 TRANSFAC + 137475508 137475524 1.0E-05 AATGGAATTGTCTTTAA 17 V_TCF3_05_M02920 TRANSFAC - 137474286 137474300 5.0E-06 GCCCTTAAAAAAAAA 15 V_ATATA_B_M00311 TRANSFAC + 137474274 137474283 1.0E-05 TTACATAAGC 10 V_GLIS2_04_M02863 TRANSFAC - 137475591 137475604 9.0E-06 AATATAAAGAAAAA 14 V_PAX4_04_M00380 TRANSFAC - 137474348 137474377 9.0E-06 AGATATTATTCTTAGATCCGGATTCACCAT 30 V_NF1_Q6_M00193 TRANSFAC + 137475558 137475575 5.0E-06 TTATGGCATAAATCCAAA 18 V_NANOG_02_M01247 TRANSFAC - 137475586 137475605 8.0E-06 TAATATAAAGAAAAAAAGGG 20 V_OCT4_01_M01125 TRANSFAC - 137474272 137474286 3.0E-06 AATGCTTATGTAAAT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.