Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

HYAL3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 8372 hyaluronoglucosaminidase 3 chr3 - 50335793 - 50341899 50336293 Transcription Factor Binding Sites   Download all TFBS in the HYAL3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR + 50340580 50340598 6.0E-06 TGGCCACTGGAGGGCACAT 19 Foxa2_MA0047.2 JASPAR - 50337306 50337317 6.0E-06 TGTTTACTGAGC 12 NEUROD2_bHLH_full_dimeric_10_1 SELEX + 50340697 50340706 4.0E-06 GACATATGTT 10 NEUROD2_bHLH_full_dimeric_10_1 SELEX - 50340697 50340706 8.0E-06 AACATATGTC 10 NFIA_NFI_full_dimeric_15_1 SELEX + 50335026 50335040 8.0E-06 GTGGCTCAGTGCCAG 15 FOXA1_MA0148.1 JASPAR - 50337307 50337317 7.0E-06 TGTTTACTGAG 11 FOXA1_MA0148.1 JASPAR + 50340270 50340280 8.0E-06 TGTTTGCATTC 11 Zfp652_C2H2_DBD_monomeric_13_1 SELEX - 50336349 50336361 2.0E-06 TGAAGGGGTTAAG 13 FOXL1_forkhead_full_dimeric_13_1 SELEX + 50333807 50333819 5.0E-06 GATCAACAAATAA 13 RXRG_nuclearreceptor_full_dimeric_14_1 SELEX - 50337966 50337979 8.0E-06 GAGTTCAAATGTCG 14 ZNF435_C2H2_full_dimeric_18_1 SELEX - 50337302 50337319 2.0E-06 GCTGTTTACTGAGCGCCT 18 HNF1B_MA0153.1 JASPAR - 50340523 50340534 0.0E+00 TCAATGTTTAAC 12 NFIX_NFI_full_dimeric_15_2 SELEX - 50335026 50335040 9.0E-06 CTGGCACTGAGCCAC 15 Esrrb_MA0141.1 JASPAR - 50337671 50337682 1.0E-05 TTGGCAAGGTCA 12 GMEB2_SAND_DBD_dimer-of-dimers_14_1 SELEX - 50337492 50337505 6.0E-06 AGAGTAAGCACGTT 14 Sox1_HMG_DBD_dimeric_13_1 SELEX - 50337505 50337517 2.0E-06 TCACTCACATTGA 13 Klf4_MA0039.2 JASPAR - 50337203 50337212 1.0E-05 AGGGTGGGGC 10 RARG_nuclearreceptor_full_dimeric_18_1 SELEX + 50340344 50340361 6.0E-06 AAGGTCAGGAAGAGGGCG 18 ESRRG_nuclearreceptor_full_dimeric_18_1 SELEX + 50340344 50340361 4.0E-06 AAGGTCAGGAAGAGGGCG 18 SOX8_HMG_full_dimeric_13_1 SELEX + 50337604 50337616 9.0E-06 GTGAATGTCAGCC 13 BHLHE23_bHLH_DBD_dimeric_10_1 SELEX + 50340697 50340706 6.0E-06 GACATATGTT 10 BHLHE23_bHLH_DBD_dimeric_10_1 SELEX - 50340697 50340706 4.0E-06 AACATATGTC 10 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 50333808 50333818 6.0E-06 ATCAACAAATA 11 HNF1A_homeodomain_full_dimeric_15_1 SELEX + 50340522 50340536 3.0E-06 TGTTAAACATTGACC 15 HNF1A_homeodomain_full_dimeric_15_1 SELEX - 50340522 50340536 2.0E-06 GGTCAATGTTTAACA 15 BHLHE22_bHLH_DBD_dimeric_12_1 SELEX + 50340696 50340707 7.0E-06 TGACATATGTTC 12 BHLHE22_bHLH_DBD_dimeric_12_1 SELEX - 50340696 50340707 3.0E-06 GAACATATGTCA 12 SP1_MA0079.2 JASPAR + 50336967 50336976 9.0E-06 CCCCTCCTCC 10 NFIX_NFI_full_monomeric_9_2 SELEX - 50337582 50337590 8.0E-06 TTTGCCAAT 9 SOX14_HMG_DBD_dimeric_13_1 SELEX - 50337505 50337517 1.0E-06 TCACTCACATTGA 13 OLIG1_bHLH_DBD_dimeric_10_1 SELEX + 50340697 50340706 5.0E-06 GACATATGTT 10 OLIG1_bHLH_DBD_dimeric_10_1 SELEX - 50340697 50340706 3.0E-06 AACATATGTC 10 ESRRG_nuclearreceptor_full_monomeric_10_1 SELEX - 50337670 50337679 1.0E-05 GCAAGGTCAT 10 SP1_C2H2_DBD_monomeric_11_1 SELEX + 50336368 50336378 5.0E-06 ACCCCACCCAC 11 SP1_C2H2_DBD_monomeric_11_1 SELEX - 50336380 50336390 1.0E-05 GCCCCGCCCAC 11 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 50333808 50333818 8.0E-06 ATCAACAAATA 11 HNF4A_nuclearreceptor_full_dimeric_15_1 SELEX - 50337965 50337979 3.0E-06 GAGTTCAAATGTCGA 15 SOX14_HMG_DBD_dimeric_12_1 SELEX - 50337506 50337517 8.0E-06 TCACTCACATTG 12 MZF1_5-13_MA0057.1 JASPAR - 50336438 50336447 4.0E-06 GGAGGGGGAA 10 ZNF143_C2H2_DBD_monomeric_16_1 SELEX + 50337864 50337879 3.0E-06 GACCCAGAGTGCATTA 16 POU1F1_POU_DBD_monomeric_17_1 SELEX - 50337752 50337768 7.0E-06 CACATGCATACTTACAG 17 HNF1B_homeodomain_full_dimeric_13_1 SELEX + 50340523 50340535 1.0E-06 GTTAAACATTGAC 13 HNF1B_homeodomain_full_dimeric_13_1 SELEX - 50340523 50340535 3.0E-06 GTCAATGTTTAAC 13 Atoh1_bHLH_DBD_dimeric_10_1 SELEX + 50340697 50340706 3.0E-06 GACATATGTT 10 Atoh1_bHLH_DBD_dimeric_10_1 SELEX - 50340697 50340706 1.0E-06 AACATATGTC 10 Hoxd9_homeodomain_DBD_monomeric_9_1 SELEX + 50337559 50337567 9.0E-06 CACATAAAA 9 FEV_MA0156.1 JASPAR - 50340925 50340932 1.0E-05 CAGGAAAT 8 ESRRB_nuclearreceptor_DBD_monomeric_11_1 SELEX - 50337669 50337679 5.0E-06 GCAAGGTCATA 11 NEUROG2_bHLH_full_dimeric_10_1 SELEX + 50340697 50340706 2.0E-06 GACATATGTT 10 NEUROG2_bHLH_full_dimeric_10_1 SELEX - 50340697 50340706 0.0E+00 AACATATGTC 10 TFAP2A_MA0003.1 JASPAR - 50336317 50336325 8.0E-06 GCCCTAGGG 9 HNF4A_nuclearreceptor_full_dimeric_14_1 SELEX - 50337966 50337979 7.0E-06 GAGTTCAAATGTCG 14 VDR_nuclearreceptor_full_dimeric_16_1 SELEX + 50337870 50337885 5.0E-06 GAGTGCATTAGGTTCT 16 SRY_HMG_DBD_dimeric_13_1 SELEX - 50337505 50337517 4.0E-06 TCACTCACATTGA 13 THRB_nuclearreceptor_DBD_dimeric_19_1 SELEX + 50337670 50337688 6.0E-06 ATGACCTTGCCAAGTAGAT 19 REST_MA0138.2 JASPAR - 50340888 50340908 9.0E-06 TTCAGCCCCAAGGTCAGCAGG 21 HNF1B_homeodomain_full_dimeric_15_1 SELEX + 50340522 50340536 2.0E-06 TGTTAAACATTGACC 15 HNF1B_homeodomain_full_dimeric_15_1 SELEX - 50340522 50340536 2.0E-06 GGTCAATGTTTAACA 15 RXRA_nuclearreceptor_full_dimeric_14_1 SELEX - 50337966 50337979 8.0E-06 GAGTTCAAATGTCG 14 BHLHA15_bHLH_DBD_dimeric_10_1 SELEX - 50340697 50340706 9.0E-06 AACATATGTC 10 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX + 50337101 50337111 1.0E-05 CGCCCCAGGCT 11 OLIG2_bHLH_full_dimeric_10_1 SELEX + 50340697 50340706 7.0E-06 GACATATGTT 10 OLIG2_bHLH_full_dimeric_10_1 SELEX - 50340697 50340706 4.0E-06 AACATATGTC 10 OLIG3_bHLH_DBD_dimeric_10_1 SELEX + 50340697 50340706 9.0E-06 GACATATGTT 10 OLIG3_bHLH_DBD_dimeric_10_1 SELEX - 50340697 50340706 4.0E-06 AACATATGTC 10 V_AP2ALPHA_01_M00469 TRANSFAC - 50336317 50336325 8.0E-06 GCCCTAGGG 9 RXR_RAR_DR5_MA0159.1 JASPAR + 50340345 50340361 6.0E-06 AGGTCAGGAAGAGGGCG 17 V_MEIS1BHOXA9_02_M00421 TRANSFAC + 50336640 50336653 3.0E-06 TGACATGTTGATGC 14 V_AP1_Q2_M00173 TRANSFAC + 50337513 50337523 0.0E+00 AGTGACTCAGT 11 V_GAF_Q6_M01209 TRANSFAC - 50337773 50337783 9.0E-06 CATATTCCCTG 11 V_FOXP3_Q4_M00992 TRANSFAC + 50336641 50336657 3.0E-06 GACATGTTGATGCTGGC 17 V_ATF_01_M00017 TRANSFAC - 50337231 50337244 1.0E-06 ATCTGACGTCAGTC 14 V_OSF2_Q6_M00731 TRANSFAC + 50337393 50337400 1.0E-05 ACCACAAA 8 V_DUXL_01_M01390 TRANSFAC + 50335461 50335477 6.0E-06 CGACCCAATCTACTTGC 17 V_ATF5_01_M01295 TRANSFAC + 50337460 50337470 2.0E-06 CTTCTCCCTTT 11 V_NFY_Q6_M00185 TRANSFAC + 50337907 50337917 6.0E-06 TGGCCAATCAC 11 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC - 50340521 50340532 0.0E+00 AATGTTTAACAG 12 V_HOXA13_02_M01297 TRANSFAC + 50337560 50337568 7.0E-06 ACATAAAAC 9 V_GABP_B_M00341 TRANSFAC - 50337922 50337933 4.0E-06 AGCGGAAGAGCA 12 V_SP1_Q6_01_M00931 TRANSFAC - 50337097 50337106 4.0E-06 GGGGCGGGGC 10 V_MEIS1AHOXA9_01_M00420 TRANSFAC - 50333813 50333826 1.0E-06 TGACAGTTTATTTG 14 V_NKX25_Q6_M02108 TRANSFAC - 50338000 50338010 0.0E+00 CTCACTTGAAG 11 V_POU1F1_Q6_M00744 TRANSFAC + 50337548 50337557 4.0E-06 ATGAATAAGT 10 V_AP2_Q6_01_M00915 TRANSFAC + 50337099 50337111 6.0E-06 CCCGCCCCAGGCT 13 V_AP2_Q6_01_M00915 TRANSFAC + 50340736 50340748 0.0E+00 CAGCCCCCAGGCT 13 V_SP1_03_M02281 TRANSFAC + 50336967 50336976 9.0E-06 CCCCTCCTCC 10 V_PU1_Q4_M01172 TRANSFAC + 50337452 50337470 4.0E-06 AATCTCAACTTCTCCCTTT 19 V_LDSPOLYA_B_M00317 TRANSFAC + 50336023 50336038 1.0E-06 CTACTGTTTTCCCATC 16 V_HNF1_C_M00206 TRANSFAC + 50340522 50340538 2.0E-06 TGTTAAACATTGACCTG 17 V_AP1_Q6_M00174 TRANSFAC + 50337513 50337523 3.0E-06 AGTGACTCAGT 11 V_NFY_C_M00209 TRANSFAC - 50337905 50337918 3.0E-06 GGTGATTGGCCACA 14 V_ROAZ_01_M00467 TRANSFAC + 50336278 50336291 5.0E-06 GCACCCTTTGGTCT 14 V_GC_01_M00255 TRANSFAC - 50336964 50336977 8.0E-06 AGGAGGAGGGGCCT 14 V_GC_01_M00255 TRANSFAC - 50337064 50337077 3.0E-06 TGGAGGCGGGGCCT 14 V_GC_01_M00255 TRANSFAC + 50341148 50341161 2.0E-06 TGGGGGTGGGGCTG 14 V_FKLF_Q5_M01837 TRANSFAC - 50340660 50340669 5.0E-06 GGGGTGGGCG 10 V_STAF_01_M00262 TRANSFAC + 50337862 50337883 2.0E-06 CAGACCCAGAGTGCATTAGGTT 22 V_HNF1_Q6_M00790 TRANSFAC - 50340520 50340537 1.0E-06 AGGTCAATGTTTAACAGA 18 Hand1_Tcfe2a_MA0092.1 JASPAR - 50340277 50340286 9.0E-06 CGTCTGGAAT 10 V_AP1_Q4_M00188 TRANSFAC + 50337513 50337523 0.0E+00 AGTGACTCAGT 11 V_SP1_Q6_M00196 TRANSFAC + 50336379 50336391 6.0E-06 TGTGGGCGGGGCT 13 V_HNF1B_04_M02266 TRANSFAC - 50340523 50340534 0.0E+00 TCAATGTTTAAC 12 V_HNF3_Q6_M00791 TRANSFAC + 50333808 50333820 2.0E-06 ATCAACAAATAAA 13 V_SOX_Q6_M01014 TRANSFAC + 50337535 50337547 4.0E-06 CTCATTGTGAGGA 13 V_HNF1_Q6_01_M01011 TRANSFAC + 50340519 50340539 6.0E-06 TTCTGTTAAACATTGACCTGC 21 V_SREBP_Q6_M01168 TRANSFAC + 50337929 50337943 0.0E+00 CCGCTCACACCACGG 15 V_HIC1_05_M02763 TRANSFAC - 50336564 50336579 3.0E-06 GCCATGCCACCCTGCA 16 V_SZF11_01_M01109 TRANSFAC - 50341118 50341132 2.0E-06 CCAGGGATTCAGAGG 15 V_DUXBL_01_M02968 TRANSFAC + 50335461 50335477 6.0E-06 CGACCCAATCTACTTGC 17 V_SP1SP3_Q4_M01219 TRANSFAC + 50336937 50336947 5.0E-06 CCGCCTCCTCC 11 V_DAX1_01_M01248 TRANSFAC - 50337665 50337684 8.0E-06 ACTTGGCAAGGTCATAGACA 20 V_RREB1_01_M00257 TRANSFAC - 50341145 50341158 1.0E-05 CCCCACCCCCAACC 14 V_HFH1_01_M00129 TRANSFAC - 50333814 50333825 4.0E-06 GACAGTTTATTT 12 V_ATF3_Q6_M00513 TRANSFAC - 50337231 50337244 2.0E-06 ATCTGACGTCAGTC 14 V_STAF_02_M00264 TRANSFAC + 50340672 50340692 8.0E-06 CTTCCCCATGAGCCACTGAGG 21 V_SP3_Q3_M00665 TRANSFAC - 50337098 50337111 5.0E-06 AGCCTGGGGCGGGG 14 V_CTCF_02_M01259 TRANSFAC + 50340577 50340596 2.0E-06 GCATGGCCACTGGAGGGCAC 20 V_CTCF_01_M01200 TRANSFAC + 50340579 50340598 1.0E-05 ATGGCCACTGGAGGGCACAT 20 V_MZF1_02_M00084 TRANSFAC - 50336438 50336450 3.0E-06 GAGGGAGGGGGAA 13 V_HNF4A_02_M02868 TRANSFAC + 50337549 50337564 8.0E-06 TGAATAAGTCCACATA 16 V_TFIII_Q6_M00706 TRANSFAC + 50336292 50336300 6.0E-06 AGAGGGAGG 9 V_SP4_Q5_M01273 TRANSFAC - 50336380 50336390 9.0E-06 GCCCCGCCCAC 11 V_CREM_Q6_M01820 TRANSFAC - 50337231 50337241 4.0E-06 TGACGTCAGTC 11 V_CAAT_01_M00254 TRANSFAC + 50337905 50337916 3.0E-06 TGTGGCCAATCA 12 V_POU5F1_01_M01307 TRANSFAC - 50340270 50340279 4.0E-06 AATGCAAACA 10 V_AP4_01_M00005 TRANSFAC - 50337069 50337086 1.0E-06 AGAGCCAGCTGGAGGCGG 18 V_SMAD4_04_M02898 TRANSFAC + 50340861 50340877 8.0E-06 GTACACCCGCCAGTCTG 17 V_AP1FJ_Q2_M00172 TRANSFAC + 50337513 50337523 0.0E+00 AGTGACTCAGT 11 V_OCT1_Q6_M00195 TRANSFAC + 50335530 50335544 2.0E-06 GAAGATGCAAAGCAG 15 V_T3R_Q6_M00963 TRANSFAC - 50340836 50340844 7.0E-06 CCTGTCCTT 9 V_ERR1_Q2_M00511 TRANSFAC - 50337669 50337682 5.0E-06 TTGGCAAGGTCATA 14 V_ATF2_Q5_M01862 TRANSFAC + 50337231 50337242 8.0E-06 GACTGACGTCAG 12 V_ATF2_Q5_M01862 TRANSFAC - 50337233 50337244 1.0E-05 ATCTGACGTCAG 12 V_AIRE_01_M00999 TRANSFAC + 50337692 50337717 1.0E-06 TATGGACATGGAATGAATGGTGTCTG 26 V_CREB_Q2_M00177 TRANSFAC - 50336981 50336992 7.0E-06 TGTGACGCAAGG 12 V_FPM315_01_M01587 TRANSFAC - 50336968 50336979 4.0E-06 GAAGGAGGAGGG 12 V_NRSF_01_M00256 TRANSFAC - 50340888 50340908 2.0E-06 TTCAGCCCCAAGGTCAGCAGG 21 V_STAT1STAT1_Q3_M01212 TRANSFAC - 50340517 50340529 8.0E-06 GTTTAACAGAAAC 13 V_FOXA2_03_M02260 TRANSFAC - 50337306 50337317 6.0E-06 TGTTTACTGAGC 12 V_FOX_Q2_M00809 TRANSFAC - 50333809 50333821 4.0E-06 GTTTATTTGTTGA 13 V_FOX_Q2_M00809 TRANSFAC - 50337320 50337332 8.0E-06 CATGATTTACTTA 13 V_REST_02_M02256 TRANSFAC - 50340888 50340908 9.0E-06 TTCAGCCCCAAGGTCAGCAGG 21 V_ESRRA_03_M02748 TRANSFAC - 50337666 50337682 6.0E-06 TTGGCAAGGTCATAGAC 17 V_ZFP281_01_M01597 TRANSFAC + 50341148 50341158 1.0E-06 TGGGGGTGGGG 11 V_SREBP_Q3_M00776 TRANSFAC + 50341037 50341048 7.0E-06 GGGGTCACCCCA 12 V_R_01_M00273 TRANSFAC - 50337893 50337913 8.0E-06 TTGGCCACACACTGAGTTGCA 21 V_RXR_RAR_01_M02272 TRANSFAC + 50340345 50340361 6.0E-06 AGGTCAGGAAGAGGGCG 17 V_SREBP1_02_M00221 TRANSFAC + 50341039 50341049 2.0E-06 GGTCACCCCAC 11 V_HFH3_01_M00289 TRANSFAC - 50333809 50333821 4.0E-06 GTTTATTTGTTGA 13 V_EKLF_Q5_M01874 TRANSFAC + 50337204 50337213 9.0E-06 CCCCACCCTG 10 V_NFE2_01_M00037 TRANSFAC - 50337514 50337524 4.0E-06 AACTGAGTCAC 11 V_HNF3B_Q6_M02014 TRANSFAC + 50337339 50337347 1.0E-05 TTATTTGCT 9 V_DR3_Q4_M00966 TRANSFAC + 50335467 50335487 7.0E-06 AATCTACTTGCTGGCCTTCTG 21 V_CTF1_01_M01196 TRANSFAC + 50335027 50335040 6.0E-06 TGGCTCAGTGCCAG 14 V_AP2ALPHA_02_M01045 TRANSFAC + 50340322 50340336 2.0E-06 AAAGCCTTGGGCCAT 15 V_UF1H3BETA_Q6_M01068 TRANSFAC + 50341146 50341159 0.0E+00 GTTGGGGGTGGGGC 14 V_SOX5_07_M02909 TRANSFAC + 50337657 50337673 6.0E-06 GGAGGAATTGTCTATGA 17 V_NFYA_Q5_M02106 TRANSFAC + 50337907 50337920 4.0E-06 TGGCCAATCACCAC 14 V_SP1_Q4_01_M00932 TRANSFAC + 50336379 50336391 5.0E-06 TGTGGGCGGGGCT 13 V_TCF11MAFG_01_M00284 TRANSFAC + 50337825 50337846 1.0E-06 CTTGTATGACTGTGCATGTATT 22 V_SREBP1_Q5_M01173 TRANSFAC + 50337929 50337943 0.0E+00 CCGCTCACACCACGG 15 V_ATF_B_M00338 TRANSFAC - 50337231 50337242 5.0E-06 CTGACGTCAGTC 12 V_BRF1_01_M01747 TRANSFAC + 50337445 50337457 4.0E-06 GGGTTTGAATCTC 13 TLX1_NFIC_MA0119.1 JASPAR + 50335027 50335040 6.0E-06 TGGCTCAGTGCCAG 14 V_FEV_01_M02269 TRANSFAC - 50340925 50340932 1.0E-05 CAGGAAAT 8 V_SMAD_Q6_M00792 TRANSFAC - 50337708 50337716 3.0E-06 AGACACCAT 9 V_SMAD1_01_M01590 TRANSFAC - 50337614 50337625 6.0E-06 AATCACAAAGGC 12 V_GATA1_06_M00347 TRANSFAC + 50335936 50335945 6.0E-06 CTAGATAAGG 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.