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SLC4A9 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 83697 solute carrier family 4, sodium bicarbonate cotransporter, member 9 chr5 + 139734786 - 139740286 139739786 Transcription Factor Binding Sites   Download all TFBS in the SLC4A9 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR + 139742932 139742950 8.0E-06 CAGCCGCTAGGGGGCAGGG 19 HOXD12_homeodomain_DBD_monomeric_9_1 SELEX + 139735359 139735367 6.0E-06 GTGATAAAA 9 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 139737592 139737604 0.0E+00 ATAAACAAATACA 13 FOXJ2_forkhead_DBD_monomeric_8_1 SELEX + 139737592 139737599 5.0E-06 ATAAACAA 8 THRB_nuclearreceptor_DBD_dimeric_20_1 SELEX + 139743070 139743089 0.0E+00 CTGACCTCGGCTGAGGACAG 20 THRB_nuclearreceptor_DBD_dimeric_20_1 SELEX - 139743070 139743089 0.0E+00 CTGTCCTCAGCCGAGGTCAG 20 BARX1_homeodomain_DBD_dimeric_17_1 SELEX - 139735354 139735370 8.0E-06 CAATTTTATCACATTTA 17 FOXF2_MA0030.1 JASPAR + 139737587 139737600 6.0E-06 AAATGATAAACAAA 14 FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 139737582 139737598 1.0E-06 GCAATAAATGATAAACA 17 FOXL1_forkhead_full_dimeric_13_1 SELEX + 139737591 139737603 2.0E-06 GATAAACAAATAC 13 CUX1_CUT_DBD_dimeric_17_1 SELEX - 139737463 139737479 3.0E-06 ATAAATACTTGTTCAAT 17 NR4A2_nuclearreceptor_full_dimeric_17_1 SELEX + 139742860 139742876 0.0E+00 AGGTCGCAATATGACCT 17 NR4A2_nuclearreceptor_full_dimeric_17_1 SELEX - 139742860 139742876 0.0E+00 AGGTCATATTGCGACCT 17 POU3F3_POU_DBD_monomeric_13_1 SELEX - 139735364 139735376 5.0E-06 TTTATGCAATTTT 13 FOXD3_forkhead_DBD_dimeric_14_1 SELEX + 139735274 139735287 8.0E-06 AGTTAGTATTTACA 14 CEBPB_bZIP_full_dimeric_10_1 SELEX + 139735317 139735326 9.0E-06 ATTGCACAAT 10 CEBPB_bZIP_full_dimeric_10_1 SELEX - 139735317 139735326 1.0E-05 ATTGTGCAAT 10 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 139737592 139737602 1.0E-06 ATAAACAAATA 11 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX + 139737585 139737598 6.0E-06 ATAAATGATAAACA 14 HNF1A_homeodomain_full_dimeric_15_1 SELEX + 139737584 139737598 5.0E-06 AATAAATGATAAACA 15 NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX - 139735347 139735362 9.0E-06 TCACATTTATAGGTTT 16 SP1_MA0079.2 JASPAR + 139743010 139743019 9.0E-06 CCCCTCCTCC 10 FOXI1_MA0042.1 JASPAR - 139737594 139737605 3.0E-06 ATGTATTTGTTT 12 FOXC1_forkhead_DBD_dimeric_14_1 SELEX + 139735274 139735287 8.0E-06 AGTTAGTATTTACA 14 BARHL2_homeodomain_full_monomeric_10_1 SELEX + 139737584 139737593 9.0E-06 AATAAATGAT 10 SP1_C2H2_DBD_monomeric_11_1 SELEX - 139739649 139739659 7.0E-06 ACCCCACCCCC 11 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 139737592 139737602 1.0E-06 ATAAACAAATA 11 ZSCAN4_C2H2_full_monomeric_15_1 SELEX - 139737552 139737566 0.0E+00 CGCACACGCTGAAAT 15 POU3F1_POU_DBD_monomeric_12_1 SELEX - 139735364 139735375 9.0E-06 TTATGCAATTTT 12 FOXC2_forkhead_DBD_dimeric_14_1 SELEX + 139735274 139735287 6.0E-06 AGTTAGTATTTACA 14 POU3F1_POU_DBD_monomeric_12_2 SELEX + 139737600 139737611 9.0E-06 ATACATAAATGA 12 CEBPE_bZIP_DBD_dimeric_10_1 SELEX + 139735317 139735326 7.0E-06 ATTGCACAAT 10 Foxj3_forkhead_DBD_monomeric_8_1 SELEX + 139737592 139737599 5.0E-06 ATAAACAA 8 HNF1B_homeodomain_full_dimeric_15_1 SELEX + 139737584 139737598 6.0E-06 AATAAATGATAAACA 15 MSX1_homeodomain_DBD_dimeric_18_1 SELEX - 139735354 139735371 7.0E-06 GCAATTTTATCACATTTA 18 ELF5_MA0136.1 JASPAR - 139735311 139735319 5.0E-06 AATTTCCTT 9 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 139737590 139737602 5.0E-06 TGATAAACAAATA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 139737592 139737604 0.0E+00 ATAAACAAATACA 13 HNF1A_MA0046.1 JASPAR + 139735274 139735287 3.0E-06 AGTTAGTATTTACA 14 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 139737585 139737598 3.0E-06 ATAAATGATAAACA 14 V_FOXP1_01_M00987 TRANSFAC - 139737592 139737611 0.0E+00 TCATTTATGTATTTGTTTAT 20 V_HNF3B_01_M00131 TRANSFAC - 139737593 139737607 3.0E-06 TTATGTATTTGTTTA 15 V_DBX1_01_M01483 TRANSFAC + 139737586 139737602 1.0E-05 TAAATGATAAACAAATA 17 V_FREAC7_01_M00293 TRANSFAC + 139737587 139737602 5.0E-06 AAATGATAAACAAATA 16 V_GEN_INI_B_M00315 TRANSFAC - 139737606 139737613 1.0E-05 CCTCATTT 8 V_CDX2_Q5_01_M01659 TRANSFAC - 139737472 139737482 3.0E-06 TCAATAAATAC 11 V_CDX2_Q5_01_M01659 TRANSFAC + 139737601 139737611 1.0E-05 TACATAAATGA 11 V_YY1_02_M00069 TRANSFAC + 139737302 139737321 6.0E-06 TCCCTGCCATCTGGGCATCT 20 V_FOXA2_04_M02749 TRANSFAC + 139737587 139737603 2.0E-06 AAATGATAAACAAATAC 17 V_NRSF_Q4_M01028 TRANSFAC - 139737533 139737551 0.0E+00 GCACAGTCCGTGGAGCAGG 19 V_CEBP_Q3_M00770 TRANSFAC - 139735317 139735328 3.0E-06 AAATTGTGCAAT 12 V_HMGIY_Q3_M01010 TRANSFAC - 139735310 139735324 1.0E-06 TGTGCAATTTCCTTA 15 V_HMGIY_Q3_M01010 TRANSFAC - 139735360 139735374 3.0E-06 TATGCAATTTTATCA 15 V_FOXO4_02_M00476 TRANSFAC - 139737589 139737602 7.0E-06 TATTTGTTTATCAT 14 V_MAFB_03_M02879 TRANSFAC + 139735365 139735379 4.0E-06 AAATTGCATAAAGCT 15 V_NFAT3_Q3_M01734 TRANSFAC + 139738608 139738617 3.0E-06 ACATTTTCCT 10 V_FOXO3A_Q1_M01137 TRANSFAC + 139737591 139737602 3.0E-06 GATAAACAAATA 12 V_CEBP_Q2_M00190 TRANSFAC + 139735315 139735328 0.0E+00 AAATTGCACAATTT 14 V_CEBP_Q2_M00190 TRANSFAC + 139735365 139735378 1.0E-06 AAATTGCATAAAGC 14 V_HNF3_Q6_01_M01012 TRANSFAC - 139737590 139737607 3.0E-06 TTATGTATTTGTTTATCA 18 V_FOXJ1_03_M02750 TRANSFAC + 139737589 139737604 0.0E+00 ATGATAAACAAATACA 16 V_SP1_03_M02281 TRANSFAC + 139743010 139743019 9.0E-06 CCCCTCCTCC 10 V_HFH4_01_M00742 TRANSFAC - 139737593 139737605 0.0E+00 ATGTATTTGTTTA 13 V_HTF_01_M00538 TRANSFAC + 139735228 139735251 0.0E+00 CACTTTATACACGTTATCTCTAAT 24 V_HOXD13_01_M01404 TRANSFAC - 139735290 139735305 3.0E-06 CAATTTATAAAACTAG 16 V_FOXP3_01_M01599 TRANSFAC + 139737592 139737599 5.0E-06 ATAAACAA 8 V_CDX_Q5_M00991 TRANSFAC + 139737587 139737604 7.0E-06 AAATGATAAACAAATACA 18 V_CDX_Q5_M00991 TRANSFAC + 139737591 139737608 0.0E+00 GATAAACAAATACATAAA 18 V_HBP1_Q2_M01661 TRANSFAC - 139737460 139737468 8.0E-06 TTCAATGAG 9 V_CEBPB_01_M00109 TRANSFAC - 139735315 139735328 0.0E+00 AAATTGTGCAATTT 14 V_SOX7_03_M02807 TRANSFAC + 139737588 139737609 4.0E-06 AATGATAAACAAATACATAAAT 22 V_SOX7_03_M02807 TRANSFAC + 139738724 139738745 8.0E-06 GTTGTTGGACAAAAGAATTTAA 22 V_GEN_INI3_B_M00314 TRANSFAC - 139737606 139737613 1.0E-05 CCTCATTT 8 V_SPI1_03_M02078 TRANSFAC + 139735268 139735277 6.0E-06 TGAGGAAGTT 10 V_HNF1_Q6_M00790 TRANSFAC - 139737582 139737599 2.0E-06 TTGTTTATCATTTATTGC 18 V_NFAT_Q6_M00302 TRANSFAC - 139738609 139738620 3.0E-06 CAAAGGAAAATG 12 V_CEBPD_Q6_M00621 TRANSFAC + 139735316 139735327 3.0E-06 AATTGCACAATT 12 V_CEBPB_02_M00117 TRANSFAC + 139735315 139735328 1.0E-06 AAATTGCACAATTT 14 V_IRX4_01_M01410 TRANSFAC - 139737462 139737478 9.0E-06 TAAATACTTGTTCAATG 17 V_CDX2_01_M01449 TRANSFAC + 139737578 139737593 5.0E-06 TCAGGCAATAAATGAT 16 V_HNF3_Q6_M00791 TRANSFAC + 139737592 139737604 0.0E+00 ATAAACAAATACA 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 139737592 139737602 0.0E+00 TATTTGTTTAT 11 V_HNF1_Q6_01_M01011 TRANSFAC + 139737581 139737601 2.0E-06 GGCAATAAATGATAAACAAAT 21 V_SFPI1_04_M02896 TRANSFAC + 139738703 139738716 5.0E-06 TAAATTAGGGAATT 14 V_ELF5_01_M01197 TRANSFAC + 139735309 139735319 1.0E-06 TTAAGGAAATT 11 V_RREB1_01_M00257 TRANSFAC + 139737235 139737248 4.0E-06 CCCCAACCCCCCAT 14 V_OCAB_Q6_M02113 TRANSFAC - 139738589 139738599 0.0E+00 ATTTGCAAATC 11 V_OCAB_Q6_M02113 TRANSFAC + 139738590 139738600 2.0E-06 ATTTGCAAATA 11 V_TBP_06_M02814 TRANSFAC - 139735291 139735306 0.0E+00 CCAATTTATAAAACTA 16 V_CTCF_02_M01259 TRANSFAC + 139739637 139739656 5.0E-06 CTTATGCCAGCAGGGGGTGG 20 V_CTCF_02_M01259 TRANSFAC + 139742929 139742948 8.0E-06 GAGCAGCCGCTAGGGGGCAG 20 V_STAT3_03_M01595 TRANSFAC + 139737632 139737647 5.0E-06 ACTGCTAGGAAGAAAA 16 V_CTCF_01_M01200 TRANSFAC + 139739639 139739658 7.0E-06 TATGCCAGCAGGGGGTGGGG 20 V_CTCF_01_M01200 TRANSFAC + 139742931 139742950 2.0E-06 GCAGCCGCTAGGGGGCAGGG 20 V_IRX5_01_M01472 TRANSFAC - 139737462 139737478 6.0E-06 TAAATACTTGTTCAATG 17 V_FOXO1_Q5_M01216 TRANSFAC + 139737592 139737600 2.0E-06 ATAAACAAA 9 V_TBP_01_M00471 TRANSFAC + 139735297 139735304 8.0E-06 TATAAATT 8 V_CEBPA_01_M00116 TRANSFAC + 139735315 139735328 1.0E-06 AAATTGCACAATTT 14 V_HOXB8_01_M01451 TRANSFAC + 139737578 139737593 2.0E-06 TCAGGCAATAAATGAT 16 V_HNF1_01_M00132 TRANSFAC + 139735274 139735288 4.0E-06 AGTTAGTATTTACAC 15 V_OCT1_Q6_M00195 TRANSFAC + 139738588 139738602 4.0E-06 GGATTTGCAAATAAT 15 V_FOXL1_04_M02753 TRANSFAC + 139737587 139737603 1.0E-06 AAATGATAAACAAATAC 17 V_GEN_INI2_B_M00313 TRANSFAC - 139737606 139737613 1.0E-05 CCTCATTT 8 V_FOXO3_01_M00477 TRANSFAC - 139737589 139737602 4.0E-06 TATTTGTTTATCAT 14 V_SPIC_02_M02077 TRANSFAC + 139735268 139735277 3.0E-06 TGAGGAAGTT 10 V_ZFP281_01_M01597 TRANSFAC + 139739648 139739658 5.0E-06 AGGGGGTGGGG 11 V_CEBPB_Q6_M01896 TRANSFAC - 139735316 139735325 4.0E-06 TTGTGCAATT 10 V_CEBPB_Q6_M01896 TRANSFAC - 139735366 139735375 2.0E-06 TTATGCAATT 10 V_MEF3_B_M00319 TRANSFAC + 139743017 139743029 3.0E-06 TCCTCAGGCTTCC 13 V_HFH3_01_M00289 TRANSFAC - 139737593 139737605 1.0E-06 ATGTATTTGTTTA 13 V_FOXJ2_01_M00422 TRANSFAC - 139737468 139737485 2.0E-06 CTCTCAATAAATACTTGT 18 V_FOXJ2_01_M00422 TRANSFAC + 139737590 139737607 1.0E-06 TGATAAACAAATACATAA 18 V_SOX1_03_M02802 TRANSFAC + 139737154 139737169 6.0E-06 TTGGTATTCAATATGT 16 V_FOXO1_01_M00473 TRANSFAC + 139737591 139737600 7.0E-06 GATAAACAAA 10 V_PIT1_Q6_M00802 TRANSFAC + 139735367 139735384 6.0E-06 ATTGCATAAAGCTACACA 18 V_FOXO4_01_M00472 TRANSFAC + 139737592 139737602 1.0E-06 ATAAACAAATA 11 V_ELF5_04_M02241 TRANSFAC - 139735311 139735319 5.0E-06 AATTTCCTT 9 V_CEBP_Q2_01_M00912 TRANSFAC + 139735317 139735328 0.0E+00 ATTGCACAATTT 12 V_MAFK_04_M02880 TRANSFAC + 139735361 139735375 3.0E-06 GATAAAATTGCATAA 15 V_HNF1A_01_M02162 TRANSFAC + 139735274 139735287 3.0E-06 AGTTAGTATTTACA 14 V_CEBPE_01_M01772 TRANSFAC - 139735317 139735326 4.0E-06 ATTGTGCAAT 10 V_CDPCR3_01_M00105 TRANSFAC + 139737467 139737481 7.0E-06 AACAAGTATTTATTG 15 V_FOXK1_03_M02752 TRANSFAC + 139737587 139737603 0.0E+00 AAATGATAAACAAATAC 17 V_SOX9_Q4_M01284 TRANSFAC - 139737446 139737456 1.0E-06 ATACAAAGGAC 11 V_SPIB_03_M02076 TRANSFAC + 139735268 139735277 2.0E-06 TGAGGAAGTT 10 V_CEBPA_Q6_M01866 TRANSFAC - 139735316 139735328 0.0E+00 AAATTGTGCAATT 13

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.