Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

RTP3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 83597 receptor (chemosensory) transporter protein 3 chr3 + 46534484 - 46539984 46539484 Transcription Factor Binding Sites   Download all TFBS in the RTP3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HOXD12_homeodomain_DBD_monomeric_9_1 SELEX + 46537926 46537934 9.0E-06 TTAATAAAA 9 FOXJ2_forkhead_DBD_monomeric_8_1 SELEX - 46543218 46543225 5.0E-06 ATAAACAA 8 MYF6_bHLH_full_dimeric_10_1 SELEX + 46542884 46542893 7.0E-06 AACAGTTGTC 10 MYF6_bHLH_full_dimeric_10_1 SELEX - 46542884 46542893 6.0E-06 GACAACTGTT 10 IRF7_IRF_DBD_dimeric_14_1 SELEX - 46537320 46537333 8.0E-06 CCAAAAGTGAATCT 14 BARX1_homeodomain_DBD_dimeric_17_1 SELEX - 46542961 46542977 8.0E-06 TAATTACATTATCTTTA 17 BARX1_homeodomain_DBD_dimeric_17_1 SELEX - 46542982 46542998 8.0E-06 CCGTTAATCAACAATTT 17 LHX6_homeodomain_full_dimeric_16_1 SELEX + 46542972 46542987 1.0E-06 TAATTAGTATAAATTG 16 LHX6_homeodomain_full_dimeric_16_1 SELEX - 46542972 46542987 9.0E-06 CAATTTATACTAATTA 16 Arx_homeodomain_DBD_dimeric_13_1 SELEX + 46542966 46542978 1.0E-06 ATAATGTAATTAG 13 Arx_homeodomain_DBD_dimeric_13_1 SELEX - 46542966 46542978 2.0E-06 CTAATTACATTAT 13 NR2E1_nuclearreceptor_full_monomeric_9_1 SELEX + 46542433 46542441 8.0E-06 AAAAGTCAT 9 PDX1_homeodomain_DBD_dimeric_18_1 SELEX + 46542971 46542988 2.0E-06 GTAATTAGTATAAATTGT 18 PDX1_homeodomain_DBD_dimeric_18_1 SELEX - 46542971 46542988 0.0E+00 ACAATTTATACTAATTAC 18 LHX2_homeodomain_DBD_dimeric_15_1 SELEX - 46542972 46542986 4.0E-06 AATTTATACTAATTA 15 POU5F1P1_POU_DBD_monomeric_9_1 SELEX - 46537334 46537342 8.0E-06 TATGCAAAA 9 POU5F1P1_POU_DBD_monomeric_9_1 SELEX + 46537454 46537462 9.0E-06 TATTTAAAT 9 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX - 46537379 46537390 9.0E-06 GGTTTCCCCACA 12 POU2F3_POU_DBD_monomeric_9_1 SELEX - 46537334 46537342 8.0E-06 TATGCAAAA 9 EWSR1-FLI1_MA0149.1 JASPAR + 46542923 46542940 6.0E-06 GGGGGAAAGGCAGGATGT 18 PDX1_homeodomain_DBD_monomeric_8_1 SELEX - 46537730 46537737 5.0E-06 GTAATTAA 8 ZNF232_C2H2_full_monomeric_19_1 SELEX + 46542978 46542996 3.0E-06 GTATAAATTGTTGATTAAC 19 POU1F1_POU_DBD_monomeric_14_1 SELEX + 46537452 46537465 0.0E+00 ATTATTTAAATGAG 14 POU1F1_POU_DBD_monomeric_14_1 SELEX - 46542971 46542984 8.0E-06 TTTATACTAATTAC 14 Alx1_homeodomain_DBD_dimeric_13_1 SELEX + 46542966 46542978 1.0E-06 ATAATGTAATTAG 13 Alx1_homeodomain_DBD_dimeric_13_1 SELEX - 46542966 46542978 1.0E-06 CTAATTACATTAT 13 HOXD11_homeodomain_DBD_monomeric_10_1 SELEX + 46542369 46542378 9.0E-06 GTTGTAAAAA 10 POU2F2_POU_DBD_monomeric_11_1 SELEX - 46537333 46537343 8.0E-06 ATATGCAAAAC 11 ISX_homeodomain_DBD_dimeric_13_1 SELEX + 46542966 46542978 0.0E+00 ATAATGTAATTAG 13 Pou2f2_POU_DBD_monomeric_9_1 SELEX - 46537334 46537342 7.0E-06 TATGCAAAA 9 Pax4_MA0068.1 JASPAR - 46542960 46542989 3.0E-06 AACAATTTATACTAATTACATTATCTTTAA 30 Pax4_MA0068.1 JASPAR - 46543357 46543386 5.0E-06 GAAATCTATTAGTAACCCCCAAATCAGTAC 30 TCF7L1_HMG_full_monomeric_12_1 SELEX - 46537638 46537649 8.0E-06 ATAGATAAAAGG 12 BARHL2_homeodomain_full_dimeric_16_1 SELEX + 46542972 46542987 2.0E-06 TAATTAGTATAAATTG 16 BARHL2_homeodomain_full_dimeric_16_1 SELEX + 46542982 46542997 8.0E-06 AAATTGTTGATTAACG 16 RORA_nuclearreceptor_DBD_dimeric_19_1 SELEX - 46534553 46534571 7.0E-06 CCTTGGGGTTACTAGGGCA 19 POU4F3_POU_DBD_monomeric_16_1 SELEX + 46542980 46542995 6.0E-06 ATAAATTGTTGATTAA 16 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX + 46542972 46542987 3.0E-06 TAATTAGTATAAATTG 16 PROP1_homeodomain_full_dimeric_11_1 SELEX + 46542967 46542977 1.0E-06 TAATGTAATTA 11 PROP1_homeodomain_full_dimeric_11_1 SELEX - 46542967 46542977 2.0E-06 TAATTACATTA 11 Dlx2_homeodomain_DBD_monomeric_8_1 SELEX - 46537730 46537737 5.0E-06 GTAATTAA 8 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX + 46537925 46537934 8.0E-06 GTTAATAAAA 10 POU3F3_POU_DBD_monomeric_13_1 SELEX + 46537452 46537464 4.0E-06 ATTATTTAAATGA 13 POU3F3_POU_DBD_monomeric_13_1 SELEX - 46542972 46542984 2.0E-06 TTTATACTAATTA 13 Hoxa2_homeodomain_DBD_monomeric_10_1 SELEX - 46542970 46542979 6.0E-06 ACTAATTACA 10 ALX3_homeodomain_full_dimeric_13_1 SELEX + 46542966 46542978 1.0E-06 ATAATGTAATTAG 13 ALX3_homeodomain_full_dimeric_13_1 SELEX - 46542966 46542978 1.0E-06 CTAATTACATTAT 13 Lhx8_homeodomain_DBD_dimeric_18_1 SELEX + 46542971 46542988 4.0E-06 GTAATTAGTATAAATTGT 18 Lhx8_homeodomain_DBD_dimeric_18_1 SELEX - 46542971 46542988 1.0E-06 ACAATTTATACTAATTAC 18 HSF4_HSF_DBD_trimeric_13_1 SELEX + 46537715 46537727 1.0E-05 CTCTAGATCTTTC 13 FOXO4_forkhead_DBD_putatively-multimeric_12_1 SELEX - 46537377 46537388 1.0E-06 TTTCCCCACAAA 12 MAX_bHLH_DBD_dimer-of-dimers_17_1 SELEX + 46543484 46543500 3.0E-06 CACATGCGGTCCACATG 17 MAX_bHLH_DBD_dimer-of-dimers_17_1 SELEX - 46543484 46543500 3.0E-06 CATGTGGACCGCATGTG 17 NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX + 46537684 46537699 7.0E-06 GAAACTTTAAATTTCA 16 NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX - 46537684 46537699 6.0E-06 TGAAATTTAAAGTTTC 16 NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX + 46537767 46537782 4.0E-06 TCACATTCAAAGGTGG 16 NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX - 46537767 46537782 6.0E-06 CCACCTTTGAATGTGA 16 FOXB1_forkhead_DBD_putative-multimer_14_1 SELEX - 46537649 46537662 3.0E-06 CAATGACACGAAGA 14 FOXB1_forkhead_DBD_putative-multimer_14_1 SELEX - 46542335 46542348 2.0E-06 GAATGACACAACAG 14 DRGX_homeodomain_DBD_dimeric_13_1 SELEX + 46542966 46542978 1.0E-06 ATAATGTAATTAG 13 DRGX_homeodomain_DBD_dimeric_13_1 SELEX - 46542966 46542978 2.0E-06 CTAATTACATTAT 13 MEOX2_homeodomain_DBD_monomeric_10_1 SELEX - 46537729 46537738 5.0E-06 TGTAATTAAG 10 PHOX2B_homeodomain_full_dimeric_11_1 SELEX + 46542967 46542977 0.0E+00 TAATGTAATTA 11 Alx4_homeodomain_DBD_dimeric_13_1 SELEX + 46542966 46542978 1.0E-06 ATAATGTAATTAG 13 Alx4_homeodomain_DBD_dimeric_13_1 SELEX - 46542966 46542978 1.0E-06 CTAATTACATTAT 13 VAX1_homeodomain_DBD_monomeric_8_1 SELEX + 46537730 46537737 9.0E-06 TTAATTAC 8 Tcf7_HMG_DBD_monomeric_12_1 SELEX - 46537638 46537649 4.0E-06 ATAGATAAAAGG 12 Gata1_MA0035.2 JASPAR - 46534636 46534646 5.0E-06 AAAGATAAGCA 11 MZF1_5-13_MA0057.1 JASPAR + 46542920 46542929 8.0E-06 TGAGGGGGAA 10 VENTX_homeodomain_DBD_dimeric_21_1 SELEX + 46542758 46542778 8.0E-06 CTATGATTCATAAACCATTTG 21 HNF1B_homeodomain_full_dimeric_13_1 SELEX - 46542984 46542996 9.0E-06 GTTAATCAACAAT 13 PRRX1_homeodomain_full_dimeric_11_1 SELEX + 46542967 46542977 0.0E+00 TAATGTAATTA 11 CART1_homeodomain_DBD_dimeric_13_1 SELEX + 46542966 46542978 0.0E+00 ATAATGTAATTAG 13 HESX1_homeodomain_DBD_dimeric_15_1 SELEX + 46542981 46542995 5.0E-06 TAAATTGTTGATTAA 15 HESX1_homeodomain_DBD_dimeric_15_1 SELEX - 46542981 46542995 7.0E-06 TTAATCAACAATTTA 15 POU3F1_POU_DBD_monomeric_12_1 SELEX + 46537453 46537464 4.0E-06 TTATTTAAATGA 12 POU3F1_POU_DBD_monomeric_12_1 SELEX - 46542972 46542983 9.0E-06 TTATACTAATTA 12 LHX9_homeodomain_DBD_dimeric_13_1 SELEX - 46542982 46542994 8.0E-06 TAATCAACAATTT 13 Uncx_homeodomain_DBD_dimeric_13_1 SELEX + 46542966 46542978 0.0E+00 ATAATGTAATTAG 13 IRF9_IRF_full_trimeric_15_1 SELEX - 46537320 46537334 1.0E-05 ACCAAAAGTGAATCT 15 FEV_MA0156.1 JASPAR + 46534573 46534580 1.0E-05 CAGGAAAT 8 DUXA_homeodomain_DBD_dimeric_13_1 SELEX + 46542966 46542978 5.0E-06 ATAATGTAATTAG 13 VAX2_homeodomain_DBD_monomeric_8_1 SELEX + 46537730 46537737 5.0E-06 TTAATTAC 8 POU2F1_POU_DBD_monomeric_12_1 SELEX - 46537333 46537344 3.0E-06 AATATGCAAAAC 12 POU2F1_POU_DBD_monomeric_12_1 SELEX + 46537452 46537463 4.0E-06 ATTATTTAAATG 12 FOXI1_forkhead_full_dimeric_17_1 SELEX + 46543218 46543234 3.0E-06 TTGTTTATAGTACAAAA 17 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX - 46537378 46537388 0.0E+00 TTTCCCCACAA 11 PHOX2A_homeodomain_DBD_dimeric_11_1 SELEX + 46542967 46542977 0.0E+00 TAATGTAATTA 11 GSX1_homeodomain_DBD_monomeric_10_1 SELEX - 46542970 46542979 6.0E-06 ACTAATTACA 10 Mafb_bZIP_DBD_dimeric_18_1 SELEX - 46537823 46537840 7.0E-06 TTTGCTGACTTCATCTGT 18 TP53_MA0106.1 JASPAR + 46543320 46543339 8.0E-06 CTGCACATGTCTGTGAATGA 20 FOXO6_forkhead_DBD_putatively-multimeric_14_1 SELEX - 46537375 46537388 4.0E-06 TTTCCCCACAAATG 14 IRF3_IRF_full_trimeric_21_1 SELEX - 46537319 46537339 6.0E-06 GCAAAACCAAAAGTGAATCTT 21 Foxj3_forkhead_DBD_monomeric_8_1 SELEX - 46543218 46543225 5.0E-06 ATAAACAA 8 FOXO1_forkhead_DBD_putatively-multimeric_12_1 SELEX - 46537377 46537388 1.0E-06 TTTCCCCACAAA 12 POU3F2_POU_DBD_monomeric_12_1 SELEX + 46537453 46537464 7.0E-06 TTATTTAAATGA 12 POU3F2_POU_DBD_monomeric_12_1 SELEX - 46542972 46542983 4.0E-06 TTATACTAATTA 12 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX + 46537925 46537935 1.0E-05 GTTAATAAAAC 11 BATF3_bZIP_DBD_dimeric_14_1 SELEX + 46537825 46537838 6.0E-06 AGATGAAGTCAGCA 14 Irx3_homeodomain_DBD_dimeric_12_1 SELEX - 46543575 46543586 5.0E-06 GAACATGAAAAA 12 IRF2_MA0051.1 JASPAR - 46537315 46537332 7.0E-06 CAAAAGTGAATCTTAAGC 18 Meox2_homeodomain_DBD_monomeric_8_1 SELEX + 46537730 46537737 9.0E-06 TTAATTAC 8 V_DMRT4_01_M01149 TRANSFAC + 46537796 46537808 1.0E-05 GATGTAGCAATGA 13 V_FOXP1_01_M00987 TRANSFAC - 46542418 46542437 8.0E-06 CTTTTTGTATCTGATTTTTT 20 V_CEBPG_Q6_M00622 TRANSFAC + 46534728 46534740 4.0E-06 ATGACTTCAGAAA 13 V_KLF15_Q2_M01714 TRANSFAC - 46537506 46537519 2.0E-06 AAGTTGGGGAGTTG 14 V_TST1_02_M01316 TRANSFAC + 46537447 46537463 3.0E-06 TCAGAATTATTTAAATG 17 V_FREAC7_01_M00293 TRANSFAC - 46542452 46542467 6.0E-06 TTCACATAAATGAAAT 16 V_HSF1_Q6_M01023 TRANSFAC - 46542462 46542478 1.0E-06 ATTCTGGACCTTTCACA 17 V_OSF2_Q6_M00731 TRANSFAC + 46543339 46543346 1.0E-05 ACCACAAA 8 V_MAFK_03_M02776 TRANSFAC + 46542980 46542994 3.0E-06 ATAAATTGTTGATTA 15 V_GATA2_02_M00348 TRANSFAC - 46537640 46537649 9.0E-06 ATAGATAAAA 10 V_EVI1_04_M00081 TRANSFAC + 46537359 46537373 1.0E-05 AAACAGGAAAAGATC 15 V_MAFB_05_M02775 TRANSFAC - 46537827 46537843 8.0E-06 CCTTTTGCTGACTTCAT 17 V_MAFB_05_M02775 TRANSFAC - 46542406 46542422 8.0E-06 TTTTTTTCTGACTTAGC 17 V_ETS_B_M00340 TRANSFAC + 46534571 46534584 7.0E-06 GCCAGGAAATGATA 14 V_PROP1_01_M01294 TRANSFAC + 46542967 46542977 4.0E-06 TAATGTAATTA 11 V_PROP1_01_M01294 TRANSFAC - 46542967 46542977 1.0E-06 TAATTACATTA 11 V_ISL2_01_M01328 TRANSFAC + 46542966 46542981 8.0E-06 ATAATGTAATTAGTAT 16 V_IRF_Q6_01_M00972 TRANSFAC - 46537321 46537331 8.0E-06 AAAAGTGAATC 11 V_RP58_01_M00532 TRANSFAC + 46542304 46542315 6.0E-06 ACCACATCTGTA 12 V_OCT1_01_M00135 TRANSFAC - 46537329 46537347 4.0E-06 GCCAATATGCAAAACCAAA 19 V_POU3F2_02_M00464 TRANSFAC - 46542974 46542983 1.0E-05 TTATACTAAT 10 V_SOX11_04_M02899 TRANSFAC + 46537449 46537462 4.0E-06 AGAATTATTTAAAT 14 V_HOXD1_01_M01448 TRANSFAC - 46542966 46542982 1.0E-06 TATACTAATTACATTAT 17 V_HOXD1_01_M01448 TRANSFAC + 46542967 46542983 1.0E-05 TAATGTAATTAGTATAA 17 V_ATF3_Q6_01_M01863 TRANSFAC + 46537827 46537837 6.0E-06 ATGAAGTCAGC 11 V_IRF3_05_M02767 TRANSFAC - 46542949 46542962 4.0E-06 TAAAAAGGAAACAC 14 V_FOXJ1_03_M02750 TRANSFAC - 46542980 46542995 9.0E-06 TTAATCAACAATTTAT 16 V_HOXA2_01_M01402 TRANSFAC - 46542966 46542981 3.0E-06 ATACTAATTACATTAT 16 V_HOXA2_01_M01402 TRANSFAC + 46542968 46542983 0.0E+00 AATGTAATTAGTATAA 16 V_DLX2_01_M01468 TRANSFAC + 46542968 46542983 4.0E-06 AATGTAATTAGTATAA 16 V_HOXC6_01_M01406 TRANSFAC - 46537725 46537741 5.0E-06 AGATGTAATTAAGTGAA 17 V_HOXC6_01_M01406 TRANSFAC + 46542967 46542983 1.0E-05 TAATGTAATTAGTATAA 17 V_LHX3_01_M01471 TRANSFAC + 46537449 46537465 3.0E-06 AGAATTATTTAAATGAG 17 V_LHX3A_01_M00510 TRANSFAC - 46537730 46537739 4.0E-06 ATGTAATTAA 10 V_HOXD13_01_M01404 TRANSFAC + 46537923 46537938 3.0E-06 AGGTTAATAAAACTCC 16 V_EVX1_01_M01475 TRANSFAC + 46542967 46542983 1.0E-06 TAATGTAATTAGTATAA 17 V_FOXP3_01_M01599 TRANSFAC - 46543218 46543225 5.0E-06 ATAAACAA 8 V_CDX_Q5_M00991 TRANSFAC + 46542427 46542444 6.0E-06 GATACAAAAAGTCATATG 18 V_PAX_Q6_M00808 TRANSFAC + 46543236 46543246 2.0E-06 CTGGAACAAAC 11 V_STAT4_Q4_M01666 TRANSFAC - 46542454 46542467 2.0E-06 TTCACATAAATGAA 14 V_TAL1_GATA1_01_M02243 TRANSFAC - 46534638 46534655 9.0E-06 CTATTTCTTAAAGATAAG 18 V_ETS_Q4_M00771 TRANSFAC - 46534573 46534584 6.0E-06 TATCATTTCCTG 12 V_ELF4_04_M02850 TRANSFAC - 46537450 46537466 3.0E-06 GCTCATTTAAATAATTC 17 V_ELF4_04_M02850 TRANSFAC + 46542410 46542426 8.0E-06 AGTCAGAAAAAAAATCA 17 V_HMBOX1_01_M01456 TRANSFAC - 46543561 46543577 8.0E-06 AAATTCTGGTTAGCTAG 17 V_SOX13_03_M02797 TRANSFAC - 46542979 46542994 2.0E-06 TAATCAACAATTTATA 16 V_HELIOSA_02_M01004 TRANSFAC - 46537752 46537762 2.0E-06 ATTTGGAAAAA 11 V_FOXA2_02_M02853 TRANSFAC - 46534511 46534525 4.0E-06 CCAGATAACAAACGT 15 V_FOXA2_02_M02853 TRANSFAC + 46537618 46537632 1.0E-06 ATAACTAACAAATAG 15 V_HOXA6_01_M01392 TRANSFAC - 46542966 46542981 5.0E-06 ATACTAATTACATTAT 16 V_HOXA6_01_M01392 TRANSFAC + 46542968 46542983 4.0E-06 AATGTAATTAGTATAA 16 V_POU3F2_01_M00463 TRANSFAC - 46542449 46542462 4.0E-06 ATAAATGAAATCAT 14 V_CEBPE_Q6_M01868 TRANSFAC - 46542774 46542787 1.0E-06 CAAGATTTCCAAAT 14 V_ZFP105_03_M02827 TRANSFAC + 46537617 46537631 1.0E-06 TATAACTAACAAATA 15 V_ZFP105_03_M02827 TRANSFAC - 46542982 46542996 7.0E-06 GTTAATCAACAATTT 15 V_HOXB13_01_M01467 TRANSFAC + 46537923 46537938 9.0E-06 AGGTTAATAAAACTCC 16 V_HNF3G_Q4_M02015 TRANSFAC - 46543240 46543247 7.0E-06 TGTTTGTT 8 V_GATA3_05_M02859 TRANSFAC - 46537726 46537747 6.0E-06 TTCTGCAGATGTAATTAAGTGA 22 V_GATA3_05_M02859 TRANSFAC - 46537820 46537841 5.0E-06 TTTTGCTGACTTCATCTGTATA 22 V_SOX7_04_M02911 TRANSFAC - 46537719 46537740 3.0E-06 GATGTAATTAAGTGAAAGATCT 22 V_SOX1_04_M02906 TRANSFAC + 46542346 46542360 2.0E-06 TTCTCATTGTTATCG 15 V_HOXA3_02_M01337 TRANSFAC + 46542966 46542979 6.0E-06 ATAATGTAATTAGT 14 V_IRF2_01_M00063 TRANSFAC - 46537320 46537332 7.0E-06 CAAAAGTGAATCT 13 V_IRX4_01_M01410 TRANSFAC - 46543573 46543589 4.0E-06 TCTGAACATGAAAAATT 17 V_AP1_Q6_01_M00925 TRANSFAC + 46537805 46537813 9.0E-06 ATGACTTAA 9 V_HOXA3_07_M02869 TRANSFAC - 46543373 46543386 4.0E-06 GAAATCTATTAGTA 14 V_HOXB9_01_M01426 TRANSFAC + 46537923 46537938 5.0E-06 AGGTTAATAAAACTCC 16 V_HOXA1_01_M01487 TRANSFAC + 46542966 46542981 1.0E-05 ATAATGTAATTAGTAT 16 V_HOXA1_01_M01487 TRANSFAC - 46542968 46542983 1.0E-06 TTATACTAATTACATT 16 V_HOXB6_01_M01460 TRANSFAC - 46542968 46542983 2.0E-06 TTATACTAATTACATT 16 V_IRF_Q6_M00772 TRANSFAC + 46537317 46537331 4.0E-06 TTAAGATTCACTTTT 15 V_SOX_Q6_M01014 TRANSFAC + 46542348 46542360 4.0E-06 CTCATTGTTATCG 13 V_GSH2_01_M01326 TRANSFAC - 46542966 46542981 4.0E-06 ATACTAATTACATTAT 16 V_GSH2_01_M01326 TRANSFAC + 46542968 46542983 4.0E-06 AATGTAATTAGTATAA 16 V_EGR1_04_M02848 TRANSFAC + 46542917 46542932 9.0E-06 TGCTGAGGGGGAAAGG 16 V_SOX18_03_M02801 TRANSFAC + 46542980 46542995 5.0E-06 ATAAATTGTTGATTAA 16 V_TATA_C_M00216 TRANSFAC - 46542957 46542966 3.0E-06 TCTTTAAAAA 10 V_OCT1_04_M00138 TRANSFAC + 46537447 46537469 7.0E-06 TCAGAATTATTTAAATGAGCCAA 23 V_OCT1_04_M00138 TRANSFAC + 46537680 46537702 5.0E-06 AAAAGAAACTTTAAATTTCATGA 23 V_OCT1_08_M01354 TRANSFAC - 46542968 46542983 4.0E-06 TTATACTAATTACATT 16 Tal1_Gata1_MA0140.1 JASPAR - 46534638 46534655 9.0E-06 CTATTTCTTAAAGATAAG 18 V_PIT1_01_M01465 TRANSFAC + 46537447 46537463 2.0E-06 TCAGAATTATTTAAATG 17 V_SOX12_04_M02900 TRANSFAC + 46534714 46534729 5.0E-06 AGATAGACAATCAAAT 16 V_ERBETA_Q5_M01875 TRANSFAC + 46537699 46537713 5.0E-06 ATGAAACTGACCTCA 15 V_OTP_01_M01323 TRANSFAC + 46542983 46542999 6.0E-06 AATTGTTGATTAACGGG 17 V_GATA1_09_M02254 TRANSFAC - 46534636 46534646 5.0E-06 AAAGATAAGCA 11 V_TCF7_03_M02817 TRANSFAC - 46543448 46543464 1.0E-05 CACAGTTCAAAGCCATT 17 V_RREB1_01_M00257 TRANSFAC + 46543340 46543353 5.0E-06 CCACAAACACACCA 14 V_XFD2_01_M00268 TRANSFAC - 46543215 46543228 2.0E-06 ACTATAAACAAGCG 14 V_NKX3A_01_M00451 TRANSFAC + 46542972 46542983 7.0E-06 TAATTAGTATAA 12 V_SRF_Q5_02_M01007 TRANSFAC + 46537599 46537617 6.0E-06 CCTTGCCTTGTTTGGAGGT 19 V_ARID3A_04_M02735 TRANSFAC + 46537922 46537938 6.0E-06 CAGGTTAATAAAACTCC 17 V_TBP_06_M02814 TRANSFAC - 46537450 46537465 3.0E-06 CTCATTTAAATAATTC 16 V_LHX3b_01_M01971 TRANSFAC - 46537730 46537739 1.0E-05 ATGTAATTAA 10 V_SOX11_03_M02795 TRANSFAC - 46542345 46542361 1.0E-05 ACGATAACAATGAGAAT 17 V_CTCF_01_M01200 TRANSFAC + 46538405 46538424 9.0E-06 GCTATCTGCAGGGGGCGCTG 20 V_MZF1_02_M00084 TRANSFAC + 46542917 46542929 8.0E-06 TGCTGAGGGGGAA 13 V_SOX9_B1_M00410 TRANSFAC - 46542347 46542360 5.0E-06 CGATAACAATGAGA 14 V_OCT1_B_M00342 TRANSFAC - 46537333 46537342 6.0E-06 TATGCAAAAC 10 V_LIM1_01_M01418 TRANSFAC + 46537449 46537465 5.0E-06 AGAATTATTTAAATGAG 17 V_ELK1_01_M00007 TRANSFAC + 46542929 46542944 8.0E-06 AAGGCAGGATGTGCCA 16 V_ZFP691_04_M02937 TRANSFAC - 46537853 46537869 3.0E-06 GAGCAGACTCCCTTGAC 17 V_GATA4_Q3_M00632 TRANSFAC - 46537636 46537647 0.0E+00 AGATAAAAGGCA 12 V_FREAC2_01_M00290 TRANSFAC - 46543215 46543230 6.0E-06 GTACTATAAACAAGCG 16 V_ZFP105_04_M02931 TRANSFAC - 46537448 46537464 1.0E-06 TCATTTAAATAATTCTG 17 V_IRX3_02_M01485 TRANSFAC - 46543573 46543589 9.0E-06 TCTGAACATGAAAAATT 17 V_HOXB7_01_M01396 TRANSFAC - 46537725 46537740 9.0E-06 GATGTAATTAAGTGAA 16 V_HOXA7_02_M01336 TRANSFAC - 46537725 46537741 1.0E-05 AGATGTAATTAAGTGAA 17 V_S8_01_M00099 TRANSFAC + 46542966 46542981 6.0E-06 ATAATGTAATTAGTAT 16 V_SOX15_03_M02799 TRANSFAC - 46542345 46542361 9.0E-06 ACGATAACAATGAGAAT 17 V_SOX15_03_M02799 TRANSFAC - 46542978 46542994 6.0E-06 TAATCAACAATTTATAC 17 V_GATA1_05_M00346 TRANSFAC - 46534516 46534525 5.0E-06 CCAGATAACA 10 V_MTF1_06_M02882 TRANSFAC + 46542409 46542422 9.0E-06 AAGTCAGAAAAAAA 14 V_TBP_01_M00471 TRANSFAC + 46542979 46542986 8.0E-06 TATAAATT 8 V_BRN4_01_M01473 TRANSFAC + 46537447 46537463 1.0E-06 TCAGAATTATTTAAATG 17 V_BRN4_01_M01473 TRANSFAC + 46537724 46537740 9.0E-06 TTTCACTTAATTACATC 17 V_HOXB8_01_M01451 TRANSFAC - 46537726 46537741 8.0E-06 AGATGTAATTAAGTGA 16 V_STRA13_01_M00985 TRANSFAC - 46543519 46543532 2.0E-06 CCCTCACGTGAGCC 14 V_FOXL1_04_M02753 TRANSFAC - 46543214 46543230 3.0E-06 GTACTATAAACAAGCGT 17 V_GFI1B_01_M01058 TRANSFAC - 46543356 46543367 4.0E-06 CAAATCAGTACT 12 V_HDX_01_M01333 TRANSFAC - 46542445 46542461 2.0E-06 TAAATGAAATCATACAA 17 V_PARP_Q3_M01211 TRANSFAC + 46534646 46534655 1.0E-06 TAAGAAATAG 10 V_PARP_Q3_M01211 TRANSFAC - 46537751 46537760 8.0E-06 TTGGAAAAAG 10 V_TCF7_04_M02921 TRANSFAC - 46543218 46543232 5.0E-06 TTGTACTATAAACAA 15 V_GATA6_01_M00462 TRANSFAC - 46534637 46534646 2.0E-06 AAAGATAAGC 10 V_MSX1_02_M01412 TRANSFAC - 46542968 46542983 5.0E-06 TTATACTAATTACATT 16 V_LMX1B_01_M01363 TRANSFAC - 46537449 46537465 6.0E-06 CTCATTTAAATAATTCT 17 V_LMX1B_01_M01363 TRANSFAC + 46542966 46542982 7.0E-06 ATAATGTAATTAGTATA 17 V_NRF2_Q4_M00821 TRANSFAC + 46542335 46542347 4.0E-06 CTGTTGTGTCATT 13 V_TCF4_Q5_M00671 TRANSFAC - 46537772 46537779 1.0E-05 CCTTTGAA 8 V_SRF_01_M00152 TRANSFAC - 46537753 46537770 9.0E-06 GTGACCACATTTGGAAAA 18 V_PLZF_02_M01075 TRANSFAC - 46537676 46537704 3.0E-06 TTTCATGAAATTTAAAGTTTCTTTTGATG 29 V_ETS1_B_M00339 TRANSFAC + 46534572 46534586 6.0E-06 CCAGGAAATGATACC 15 V_BBX_03_M02739 TRANSFAC - 46537722 46537736 7.0E-06 TAATTAAGTGAAAGA 15 V_SOX21_04_M02907 TRANSFAC + 46542979 46542995 2.0E-06 TATAAATTGTTGATTAA 17 V_IRX2_01_M01405 TRANSFAC - 46543573 46543589 1.0E-05 TCTGAACATGAAAAATT 17 V_OCT1_07_M00248 TRANSFAC - 46542973 46542984 9.0E-06 TTTATACTAATT 12 V_SRF_02_M01257 TRANSFAC - 46537598 46537615 2.0E-06 CTCCAAACAAGGCAAGGC 18 V_LXRA_RXRA_Q3_M00647 TRANSFAC - 46534556 46534570 6.0E-06 CTTGGGGTTACTAGG 15 V_LXRA_RXRA_Q3_M00647 TRANSFAC - 46537701 46537715 6.0E-06 GATGAGGTCAGTTTC 15 V_SOX8_03_M02808 TRANSFAC + 46542978 46542994 0.0E+00 GTATAAATTGTTGATTA 17 V_SRF_06_M02916 TRANSFAC + 46542410 46542426 5.0E-06 AGTCAGAAAAAAAATCA 17 V_HSF2_02_M01244 TRANSFAC + 46542465 46542477 9.0E-06 GAAAGGTCCAGAA 13 V_VAX1_01_M01397 TRANSFAC + 46542968 46542983 1.0E-05 AATGTAATTAGTATAA 16 V_EWSR1FLI1_01_M02252 TRANSFAC + 46542923 46542940 6.0E-06 GGGGGAAAGGCAGGATGT 18 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC - 46542302 46542309 1.0E-05 TGTGGTTT 8 V_HOXB3_01_M01330 TRANSFAC - 46537725 46537741 3.0E-06 AGATGTAATTAAGTGAA 17 V_HOXB3_01_M01330 TRANSFAC + 46542967 46542983 2.0E-06 TAATGTAATTAGTATAA 17 V_FOXO1_01_M00473 TRANSFAC - 46543217 46543226 5.0E-06 TATAAACAAG 10 V_ALX3_01_M01355 TRANSFAC - 46542966 46542982 1.0E-05 TATACTAATTACATTAT 17 V_IRF1_01_M00062 TRANSFAC - 46537320 46537332 1.0E-05 CAAAAGTGAATCT 13 V_IRF1_01_M00062 TRANSFAC - 46537326 46537338 2.0E-06 CAAAACCAAAAGT 13 V_MOX1_01_M01443 TRANSFAC - 46537725 46537740 4.0E-06 GATGTAATTAAGTGAA 16 V_MOX1_01_M01443 TRANSFAC + 46542968 46542983 1.0E-06 AATGTAATTAGTATAA 16 V_BSX_01_M01442 TRANSFAC - 46537725 46537740 1.0E-05 GATGTAATTAAGTGAA 16 V_BSX_01_M01442 TRANSFAC + 46542968 46542983 8.0E-06 AATGTAATTAGTATAA 16 V_SOX12_03_M02796 TRANSFAC + 46542364 46542377 5.0E-06 TGATTGTTGTAAAA 14 V_PIT1_Q6_M00802 TRANSFAC - 46534636 46534653 4.0E-06 ATTTCTTAAAGATAAGCA 18 V_SOX15_04_M02903 TRANSFAC - 46537690 46537704 2.0E-06 TTTCATGAAATTTAA 15 V_HOXA7_03_M01394 TRANSFAC - 46537725 46537740 6.0E-06 GATGTAATTAAGTGAA 16 V_SRY_05_M02917 TRANSFAC - 46542979 46542995 2.0E-06 TTAATCAACAATTTATA 17 V_HOXD3_01_M01338 TRANSFAC - 46542968 46542983 1.0E-06 TTATACTAATTACATT 16 V_LHX4_01_M01421 TRANSFAC - 46542966 46542982 4.0E-06 TATACTAATTACATTAT 17 V_LHX5_01_M01353 TRANSFAC + 46537449 46537465 4.0E-06 AGAATTATTTAAATGAG 17 V_LHX5_01_M01353 TRANSFAC - 46542966 46542982 1.0E-05 TATACTAATTACATTAT 17 V_HOXA10_01_M01464 TRANSFAC - 46537725 46537740 4.0E-06 GATGTAATTAAGTGAA 16 V_SOX5_07_M02909 TRANSFAC + 46542978 46542994 0.0E+00 GTATAAATTGTTGATTA 17 V_GATA1_02_M00126 TRANSFAC + 46542960 46542973 0.0E+00 TTAAAGATAATGTA 14 V_DLX1_01_M01439 TRANSFAC - 46537729 46537742 8.0E-06 CAGATGTAATTAAG 14 V_DLX1_01_M01439 TRANSFAC + 46542966 46542979 3.0E-06 ATAATGTAATTAGT 14 V_BARX1_01_M01340 TRANSFAC - 46542966 46542981 8.0E-06 ATACTAATTACATTAT 16 V_BARX1_01_M01340 TRANSFAC + 46542968 46542983 2.0E-06 AATGTAATTAGTATAA 16 V_HOXD10_01_M01375 TRANSFAC + 46537923 46537939 6.0E-06 AGGTTAATAAAACTCCC 17 V_IRXB3_01_M01377 TRANSFAC - 46543573 46543589 7.0E-06 TCTGAACATGAAAAATT 17 V_ALX3_02_M02943 TRANSFAC - 46542966 46542982 1.0E-05 TATACTAATTACATTAT 17 V_TCF3_05_M02920 TRANSFAC + 46542410 46542424 4.0E-06 AGTCAGAAAAAAAAT 15 V_FEV_01_M02269 TRANSFAC + 46534573 46534580 1.0E-05 CAGGAAAT 8 V_CEBPG_Q6_01_M01869 TRANSFAC + 46542773 46542784 9.0E-06 CATTTGGAAATC 12 V_GBX1_01_M01371 TRANSFAC - 46542967 46542983 9.0E-06 TTATACTAATTACATTA 17 V_HOXB5_01_M01319 TRANSFAC - 46542966 46542981 4.0E-06 ATACTAATTACATTAT 16 V_HOXB5_01_M01319 TRANSFAC + 46542968 46542983 2.0E-06 AATGTAATTAGTATAA 16 V_HOX13_02_M01452 TRANSFAC - 46542966 46542981 3.0E-06 ATACTAATTACATTAT 16 V_HOX13_02_M01452 TRANSFAC + 46542968 46542983 0.0E+00 AATGTAATTAGTATAA 16 V_NANOG_02_M01247 TRANSFAC - 46542338 46542357 9.0E-06 TAACAATGAGAATGACACAA 20 V_T3RALPHA_Q6_M01724 TRANSFAC - 46537705 46537715 5.0E-06 GATGAGGTCAG 11 V_GATA1_06_M00347 TRANSFAC - 46537640 46537649 1.0E-06 ATAGATAAAA 10 V_TCF11_01_M00285 TRANSFAC - 46534770 46534782 6.0E-06 GTCATTTAGCATG 13 V_HOXC8_01_M01321 TRANSFAC - 46537727 46537742 9.0E-06 CAGATGTAATTAAGTG 16 V_HOXC8_01_M01321 TRANSFAC + 46542966 46542981 7.0E-06 ATAATGTAATTAGTAT 16 V_HOXC8_01_M01321 TRANSFAC - 46542968 46542983 5.0E-06 TTATACTAATTACATT 16 V_IPF1_06_M01438 TRANSFAC - 46542966 46542981 3.0E-06 ATACTAATTACATTAT 16 V_IPF1_06_M01438 TRANSFAC + 46542968 46542983 0.0E+00 AATGTAATTAGTATAA 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.