Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

SF3B5


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
83443 splicing factor 3b, subunit 5, 10kDa chr6 -144416254 - 144421754 144416754

Transcription Factor Binding Sites

 
Download all TFBS in the SF3B5 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
SP8_C2H2_DBD_monomeric_12_1 SELEX + 144416541 144416552 2.0E-06 GCCACTCCCACT 12
HINFP1_C2H2_full_dimeric_19_1 SELEX + 144416722 144416740 1.0E-06 GCGGAAGCTCCAGGTCCGC 19
HINFP1_C2H2_full_dimeric_19_1 SELEX - 144416722 144416740 0.0E+00 GCGGACCTGGAGCTTCCGC 19
MEF2D_MADS_DBD_dimeric_12_1 SELEX - 144417205 144417216 2.0E-06 ACTAAAAATACA 12
FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 144417039 144417050 2.0E-06 TAAACAAACAAA 12
FOXL1_forkhead_full_dimeric_13_1 SELEX - 144417028 144417040 3.0E-06 AACAAACAAACAA 13
FOXL1_forkhead_full_dimeric_13_1 SELEX - 144417032 144417044 3.0E-06 AACAAACAAACAA 13
FOXL1_forkhead_full_dimeric_13_1 SELEX - 144417036 144417048 3.0E-06 AACAAACAAACAA 13
FOXL1_forkhead_full_dimeric_13_1 SELEX - 144417040 144417052 1.0E-06 CTTAAACAAACAA 13
Tp53_p53l_DBD_dimeric_18_2 SELEX + 144416960 144416977 9.0E-06 TGCATGCTGGGACTTGTG 18
Tp73_p53l_DBD_dimeric_18_1 SELEX + 144416960 144416977 8.0E-06 TGCATGCTGGGACTTGTG 18
Tp73_p53l_DBD_dimeric_18_1 SELEX - 144416960 144416977 7.0E-06 CACAAGTCCCAGCATGCA 18
MEF2A_MADS_DBD_dimeric_12_1 SELEX - 144417205 144417216 6.0E-06 ACTAAAAATACA 12
SCRT2_C2H2_DBD_monomeric_13_1 SELEX + 144416852 144416864 2.0E-06 ACGCAACAAGTGT 13
MEF2B_MADS_full_dimeric_12_1 SELEX - 144417205 144417216 3.0E-06 ACTAAAAATACA 12
Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 144417029 144417039 2.0E-06 ACAAACAAACA 11
Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 144417033 144417043 2.0E-06 ACAAACAAACA 11
Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 144417037 144417047 2.0E-06 ACAAACAAACA 11
Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 144417041 144417051 2.0E-06 TTAAACAAACA 11
FOXJ3_forkhead_DBD_dimeric_14_1 SELEX - 144417026 144417039 4.0E-06 ACAAACAAACAACA 14
FOXI1_MA0042.1 JASPAR + 144417026 144417037 0.0E+00 TGTTGTTTGTTT 12
FOXI1_MA0042.1 JASPAR + 144417030 144417041 1.0E-06 GTTTGTTTGTTT 12
FOXI1_MA0042.1 JASPAR + 144417034 144417045 1.0E-06 GTTTGTTTGTTT 12
FOXI1_MA0042.1 JASPAR + 144417038 144417049 1.0E-06 GTTTGTTTGTTT 12
NFIX_NFI_full_monomeric_9_2 SELEX - 144416314 144416322 8.0E-06 TTTGCCAAT 9
znf143_MA0088.1 JASPAR - 144416956 144416975 0.0E+00 CAAGTCCCAGCATGCAACGC 20
SP4_C2H2_full_monomeric_17_1 SELEX + 144416538 144416554 1.0E-05 CCAGCCACTCCCACTTG 17
FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 144417029 144417039 2.0E-06 ACAAACAAACA 11
FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 144417033 144417043 2.0E-06 ACAAACAAACA 11
FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 144417037 144417047 2.0E-06 ACAAACAAACA 11
FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 144417041 144417051 1.0E-06 TTAAACAAACA 11
FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 144417448 144417458 9.0E-06 GAAAATAAACT 11
SCRT1_C2H2_DBD_monomeric_15_1 SELEX + 144416852 144416866 3.0E-06 ACGCAACAAGTGTGC 15
ZNF143_C2H2_DBD_monomeric_16_1 SELEX - 144416957 144416972 2.0E-06 GTCCCAGCATGCAACG 16
Foxd3_MA0041.1 JASPAR + 144417030 144417041 0.0E+00 GTTTGTTTGTTT 12
Foxd3_MA0041.1 JASPAR + 144417034 144417045 0.0E+00 GTTTGTTTGTTT 12
Foxd3_MA0041.1 JASPAR + 144417038 144417049 0.0E+00 GTTTGTTTGTTT 12
Nkx3-2_MA0122.1 JASPAR - 144416917 144416925 8.0E-06 CTAAGTGGA 9
ETS1_ETS_full_dimeric_18_1 SELEX - 144416810 144416827 6.0E-06 ACAGAATGTGCTTCCGCT 18
ETV6_ETS_full_dimeric_15_1 SELEX + 144416805 144416819 0.0E+00 GCGGAAGCGGAAGCA 15
FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 144417029 144417041 0.0E+00 AAACAAACAAACA 13
FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 144417033 144417045 0.0E+00 AAACAAACAAACA 13
FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 144417037 144417049 0.0E+00 AAACAAACAAACA 13
Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 144417031 144417043 9.0E-06 ACAAACAAACAAA 13
Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 144417035 144417047 9.0E-06 ACAAACAAACAAA 13
TP63_p53l_DBD_dimeric_18_1 SELEX + 144416960 144416977 3.0E-06 TGCATGCTGGGACTTGTG 18
FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 144417026 144417039 1.0E-06 ACAAACAAACAACA 14
V_FOXP1_01_M00987 TRANSFAC + 144417026 144417045 3.0E-06 TGTTGTTTGTTTGTTTGTTT 20
V_FOXP1_01_M00987 TRANSFAC + 144417028 144417047 0.0E+00 TTGTTTGTTTGTTTGTTTGT 20
V_FOXP1_01_M00987 TRANSFAC + 144417030 144417049 3.0E-06 GTTTGTTTGTTTGTTTGTTT 20
V_FOXP1_01_M00987 TRANSFAC + 144417032 144417051 2.0E-06 TTGTTTGTTTGTTTGTTTAA 20
V_HNF3B_01_M00131 TRANSFAC + 144417036 144417050 2.0E-06 TTGTTTGTTTGTTTA 15
V_TCF3_01_M01594 TRANSFAC + 144417201 144417213 3.0E-06 TTTTTGTATTTTT 13
V_FOXD3_01_M00130 TRANSFAC + 144417030 144417041 0.0E+00 GTTTGTTTGTTT 12
V_FOXD3_01_M00130 TRANSFAC + 144417034 144417045 0.0E+00 GTTTGTTTGTTT 12
V_FOXD3_01_M00130 TRANSFAC + 144417038 144417049 0.0E+00 GTTTGTTTGTTT 12
V_HNF3_Q6_01_M01012 TRANSFAC + 144417024 144417041 8.0E-06 TCTGTTGTTTGTTTGTTT 18
V_HNF3_Q6_01_M01012 TRANSFAC + 144417028 144417045 0.0E+00 TTGTTTGTTTGTTTGTTT 18
V_HNF3_Q6_01_M01012 TRANSFAC + 144417032 144417049 0.0E+00 TTGTTTGTTTGTTTGTTT 18
V_HNF3_Q6_01_M01012 TRANSFAC + 144417036 144417053 0.0E+00 TTGTTTGTTTGTTTAAGA 18
V_FOXJ1_03_M02750 TRANSFAC - 144417031 144417046 1.0E-05 CAAACAAACAAACAAA 16
V_FOXJ1_03_M02750 TRANSFAC - 144417035 144417050 6.0E-06 TAAACAAACAAACAAA 16
V_HFH4_01_M00742 TRANSFAC + 144417030 144417042 2.0E-06 GTTTGTTTGTTTG 13
V_HFH4_01_M00742 TRANSFAC + 144417034 144417046 2.0E-06 GTTTGTTTGTTTG 13
V_HFH4_01_M00742 TRANSFAC + 144417038 144417050 0.0E+00 GTTTGTTTGTTTA 13
V_HFH4_01_M00742 TRANSFAC - 144417449 144417461 3.0E-06 AAGAGTTTATTTT 13
V_PAX3_B_M00327 TRANSFAC + 144416819 144416839 2.0E-06 ACATTCTGTCACGCAATTGGA 21
V_MEF2A_Q6_M02024 TRANSFAC + 144417207 144417216 4.0E-06 TATTTTTAGT 10
V_HNF3G_Q4_M02015 TRANSFAC + 144417029 144417036 7.0E-06 TGTTTGTT 8
V_HNF3G_Q4_M02015 TRANSFAC + 144417033 144417040 7.0E-06 TGTTTGTT 8
V_HNF3G_Q4_M02015 TRANSFAC + 144417037 144417044 7.0E-06 TGTTTGTT 8
V_HNF3G_Q4_M02015 TRANSFAC + 144417041 144417048 7.0E-06 TGTTTGTT 8
V_STAF_01_M00262 TRANSFAC - 144416953 144416974 1.0E-06 AAGTCCCAGCATGCAACGCTCC 22
V_NKX31_02_M02782 TRANSFAC - 144416302 144416318 7.0E-06 CCAATCCTCTTAAGTAT 17
V_NKX26_01_M01322 TRANSFAC - 144416302 144416317 8.0E-06 CAATCCTCTTAAGTAT 16
V_POLY_C_M00212 TRANSFAC + 144417450 144417467 4.0E-06 AAATAAACTCTTGGTGTA 18
V_IRF5_04_M02873 TRANSFAC - 144416779 144416793 7.0E-06 ATGAGCGAGAGTTAC 15
V_RSRFC4_Q2_M00407 TRANSFAC - 144417202 144417218 8.0E-06 TTACTAAAAATACAAAA 17
V_HNF3_Q6_M00791 TRANSFAC - 144417031 144417043 1.0E-06 ACAAACAAACAAA 13
V_HNF3_Q6_M00791 TRANSFAC - 144417035 144417047 1.0E-06 ACAAACAAACAAA 13
V_HNF3_Q6_M00791 TRANSFAC - 144417039 144417051 0.0E+00 TTAAACAAACAAA 13
V_HNF3ALPHA_Q6_M00724 TRANSFAC + 144417041 144417051 1.0E-06 TGTTTGTTTAA 11
V_MEF2_03_M00232 TRANSFAC - 144417201 144417222 7.0E-06 GTCTTTACTAAAAATACAAAAA 22
V_PAX6_Q2_M00979 TRANSFAC - 144416726 144416739 8.0E-06 CGGACCTGGAGCTT 14
V_MEF2_04_M00233 TRANSFAC - 144417201 144417222 0.0E+00 GTCTTTACTAAAAATACAAAAA 22
V_GRE_C_M00205 TRANSFAC - 144416815 144416830 4.0E-06 GTGACAGAATGTGCTT 16
V_HFH1_01_M00129 TRANSFAC + 144417026 144417037 5.0E-06 TGTTGTTTGTTT 12
V_STAF_02_M00264 TRANSFAC - 144416954 144416974 0.0E+00 AAGTCCCAGCATGCAACGCTC 21
V_ELK1_01_M00007 TRANSFAC + 144416807 144416822 5.0E-06 GGAAGCGGAAGCACAT 16
V_NKX32_02_M01482 TRANSFAC - 144416302 144416318 8.0E-06 CCAATCCTCTTAAGTAT 17
V_BCL6B_04_M02844 TRANSFAC + 144416884 144416899 3.0E-06 ATCCCCGCCCCATCAG 16
V_HFH8_01_M00294 TRANSFAC + 144417026 144417038 9.0E-06 TGTTGTTTGTTTG 13
V_HFH8_01_M00294 TRANSFAC + 144417030 144417042 4.0E-06 GTTTGTTTGTTTG 13
V_HFH8_01_M00294 TRANSFAC + 144417034 144417046 4.0E-06 GTTTGTTTGTTTG 13
V_HFH8_01_M00294 TRANSFAC + 144417038 144417050 3.0E-06 GTTTGTTTGTTTA 13
V_MTF1_06_M02882 TRANSFAC - 144417198 144417211 0.0E+00 AAATACAAAAAAAC 14
V_NKX25_03_M01414 TRANSFAC - 144416302 144416317 9.0E-06 CAATCCTCTTAAGTAT 16
V_EBNA1_01_M01745 TRANSFAC - 144416813 144416828 0.0E+00 GACAGAATGTGCTTCC 16
V_FOX_Q2_M00809 TRANSFAC + 144417026 144417038 8.0E-06 TGTTGTTTGTTTG 13
V_FOX_Q2_M00809 TRANSFAC + 144417030 144417042 2.0E-06 GTTTGTTTGTTTG 13
V_FOX_Q2_M00809 TRANSFAC + 144417034 144417046 2.0E-06 GTTTGTTTGTTTG 13
V_FOX_Q2_M00809 TRANSFAC + 144417038 144417050 0.0E+00 GTTTGTTTGTTTA 13
V_PLZF_02_M01075 TRANSFAC + 144417204 144417232 6.0E-06 TTGTATTTTTAGTAAAGACGGGGTTTCAC 29
V_OCT1_06_M00162 TRANSFAC + 144417685 144417698 6.0E-06 CTTATTTTGATATC 14
V_SRF_06_M02916 TRANSFAC - 144417036 144417052 6.0E-06 CTTAAACAAACAAACAA 17
V_HFH3_01_M00289 TRANSFAC + 144417026 144417038 2.0E-06 TGTTGTTTGTTTG 13
V_HFH3_01_M00289 TRANSFAC + 144417030 144417042 2.0E-06 GTTTGTTTGTTTG 13
V_HFH3_01_M00289 TRANSFAC + 144417034 144417046 2.0E-06 GTTTGTTTGTTTG 13
V_HFH3_01_M00289 TRANSFAC + 144417038 144417050 0.0E+00 GTTTGTTTGTTTA 13
V_FOXJ2_01_M00422 TRANSFAC - 144417024 144417041 1.0E-06 AAACAAACAAACAACAGA 18
V_FOXJ2_01_M00422 TRANSFAC - 144417028 144417045 0.0E+00 AAACAAACAAACAAACAA 18
V_FOXJ2_01_M00422 TRANSFAC - 144417032 144417049 0.0E+00 AAACAAACAAACAAACAA 18
V_FOXJ2_01_M00422 TRANSFAC - 144417036 144417053 0.0E+00 TCTTAAACAAACAAACAA 18
V_SIX6_01_M01345 TRANSFAC - 144417687 144417703 5.0E-06 GGGAGGATATCAAAATA 17
V_SATB1_01_M01232 TRANSFAC + 144417210 144417221 6.0E-06 TTTTAGTAAAGA 12
V_HNF3B_Q6_M02014 TRANSFAC + 144417028 144417036 1.0E-05 TTGTTTGTT 9
V_HNF3B_Q6_M02014 TRANSFAC + 144417032 144417040 1.0E-05 TTGTTTGTT 9
V_HNF3B_Q6_M02014 TRANSFAC + 144417036 144417044 1.0E-05 TTGTTTGTT 9
V_HNF3B_Q6_M02014 TRANSFAC + 144417040 144417048 1.0E-05 TTGTTTGTT 9
V_ARP1_01_M00155 TRANSFAC - 144416794 144416809 5.0E-06 TCCGCCTCTGAGCCCT 16
V_CP2_01_M00072 TRANSFAC + 144417596 144417606 2.0E-06 GCTCTAACCAG 11
V_BRCA_01_M01082 TRANSFAC + 144417023 144417030 1.0E-05 TTCTGTTG 8
V_GLIS2_04_M02863 TRANSFAC + 144417208 144417221 2.0E-06 ATTTTTAGTAAAGA 14
V_ARID5A_04_M02840 TRANSFAC - 144417199 144417215 4.0E-06 CTAAAAATACAAAAAAA 17
V_PAX2_02_M00486 TRANSFAC + 144417451 144417459 2.0E-06 AATAAACTC 9
V_NANOG_02_M01247 TRANSFAC - 144417032 144417051 4.0E-06 TTAAACAAACAAACAAACAA 20
V_NANOG_02_M01247 TRANSFAC - 144417196 144417215 2.0E-06 CTAAAAATACAAAAAAACTA 20
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL