Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ACOX2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 8309 acyl-CoA oxidase 2, branched chain chr3 - 58522429 - 58527929 58522929 Transcription Factor Binding Sites   Download all TFBS in the ACOX2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints GMEB2_SAND_DBD_dimeric_8_2 SELEX + 58523646 58523653 7.0E-06 TTACGTAA 8 GMEB2_SAND_DBD_dimeric_8_2 SELEX - 58523646 58523653 7.0E-06 TTACGTAA 8 CTCF_MA0139.1 JASPAR - 58518651 58518669 0.0E+00 TGGCCACCAGGTGGCGGCC 19 Foxa2_MA0047.2 JASPAR + 58523734 58523745 9.0E-06 TGTTGACTCTGA 12 RARB_nuclearreceptor_full_dimeric_16_1 SELEX - 58521723 58521738 0.0E+00 GCAGTTCAAGAGTTCA 16 TEF_bZIP_DBD_dimeric_12_1 SELEX + 58523644 58523655 0.0E+00 GATTACGTAACA 12 TEF_bZIP_DBD_dimeric_12_1 SELEX - 58523644 58523655 1.0E-06 TGTTACGTAATC 12 FOXL1_forkhead_full_dimeric_13_1 SELEX - 58521975 58521987 2.0E-06 TGTAAGCAAATAA 13 TBX19_TBX_DBD_dimeric_20_1 SELEX + 58523649 58523668 3.0E-06 CGTAACACATTTGTGTAAGA 20 TBX19_TBX_DBD_dimeric_20_1 SELEX - 58523649 58523668 4.0E-06 TCTTACACAAATGTGTTACG 20 HLF_bZIP_full_dimeric_12_1 SELEX + 58523644 58523655 1.0E-06 GATTACGTAACA 12 HLF_bZIP_full_dimeric_12_1 SELEX - 58523644 58523655 1.0E-06 TGTTACGTAATC 12 EWSR1-FLI1_MA0149.1 JASPAR - 58522085 58522102 6.0E-06 TGAGGTCAGGAAGGAAGG 18 EWSR1-FLI1_MA0149.1 JASPAR - 58523082 58523099 1.0E-06 GAGAGGGAGGAAGGAGAG 18 EWSR1-FLI1_MA0149.1 JASPAR - 58523086 58523103 0.0E+00 GGAAGAGAGGGAGGAAGG 18 NFIL3_MA0025.1 JASPAR - 58523643 58523653 3.0E-06 TTACGTAATCT 11 NFIL3_MA0025.1 JASPAR + 58523646 58523656 4.0E-06 TTACGTAACAC 11 SOX15_HMG_full_dimeric_15_3 SELEX + 58525447 58525461 5.0E-06 CTGCATATCATGCAT 15 DBP_bZIP_full_dimeric_12_1 SELEX + 58523644 58523655 0.0E+00 GATTACGTAACA 12 DBP_bZIP_full_dimeric_12_1 SELEX - 58523644 58523655 1.0E-06 TGTTACGTAATC 12 ISX_homeodomain_DBD_dimeric_13_1 SELEX - 58523637 58523649 7.0E-06 GTAATCTACTTAT 13 Creb5_bZIP_DBD_dimeric_12_1 SELEX + 58523644 58523655 4.0E-06 GATTACGTAACA 12 Pax4_MA0068.1 JASPAR + 58525587 58525616 4.0E-06 AAAAAAGAACACATAAGAAGACCACAAGCC 30 NFKB2_NFAT_DBD_dimeric_13_1 SELEX + 58518594 58518606 5.0E-06 AGGGGAAATCCCT 13 NFKB2_NFAT_DBD_dimeric_13_1 SELEX - 58518594 58518606 5.0E-06 AGGGATTTCCCCT 13 RARG_nuclearreceptor_full_dimeric_18_1 SELEX - 58522095 58522112 1.0E-05 TCTGTCAGGTTGAGGTCA 18 PROP1_homeodomain_full_dimeric_11_1 SELEX - 58523638 58523648 5.0E-06 TAATCTACTTA 11 ATF7_bZIP_DBD_dimeric_14_1 SELEX + 58523643 58523656 8.0E-06 AGATTACGTAACAC 14 ZIC3_C2H2_full_monomeric_15_1 SELEX - 58518667 58518681 6.0E-06 TACCTCCTGCTGTGG 15 DRGX_homeodomain_DBD_dimeric_13_1 SELEX - 58523637 58523649 1.0E-05 GTAATCTACTTAT 13 SRY_MA0084.1 JASPAR - 58521746 58521754 9.0E-06 GAAAACAAT 9 CTCF_C2H2_full_monomeric_17_1 SELEX + 58518652 58518668 5.0E-06 GCCGCCACCTGGTGGCC 17 PBX1_MA0070.1 JASPAR + 58525529 58525540 0.0E+00 CTATCAATCAAA 12 NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX - 58521722 58521737 8.0E-06 CAGTTCAAGAGTTCAC 16 NRL_bZIP_DBD_monomeric_11_1 SELEX + 58521976 58521986 8.0E-06 TATTTGCTTAC 11 NFIL3_bZIP_DBD_dimeric_12_1 SELEX + 58523644 58523655 1.0E-06 GATTACGTAACA 12 NFIL3_bZIP_DBD_dimeric_12_1 SELEX - 58523644 58523655 2.0E-06 TGTTACGTAATC 12 GMEB2_SAND_DBD_dimer-of-dimers_15_1 SELEX - 58523638 58523652 2.0E-06 TACGTAATCTACTTA 15 T_TBX_full_dimeric_16_1 SELEX + 58523651 58523666 1.0E-06 TAACACATTTGTGTAA 16 T_TBX_full_dimeric_16_1 SELEX - 58523651 58523666 1.0E-06 TTACACAAATGTGTTA 16 NFIB_NFI_full_dimeric_15_1 SELEX + 58521648 58521662 1.0E-05 TTGGCTAGCATCCAG 15 HLF_MA0043.1 JASPAR + 58523644 58523655 4.0E-06 GATTACGTAACA 12 HLF_MA0043.1 JASPAR - 58523644 58523655 0.0E+00 TGTTACGTAATC 12 IRF3_IRF_full_trimeric_21_1 SELEX + 58525572 58525592 3.0E-06 TGGGAAAAGAAAGGGAAAAAA 21 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX - 58521723 58521737 4.0E-06 CAGTTCAAGAGTTCA 15 RARG_nuclearreceptor_full_dimeric_16_1 SELEX - 58521722 58521737 7.0E-06 CAGTTCAAGAGTTCAC 16 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 58521976 58521988 5.0E-06 ATGTAAGCAAATA 13 RARA_nuclearreceptor_full_dimeric_15_1 SELEX - 58521723 58521737 2.0E-06 CAGTTCAAGAGTTCA 15 ZIC1_C2H2_full_monomeric_14_1 SELEX - 58518668 58518681 1.0E-06 TACCTCCTGCTGTG 14 V_MEQ_01_M02049 TRANSFAC - 58518873 58518881 7.0E-06 AACACACAC 9 V_HNF3B_01_M00131 TRANSFAC + 58521971 58521985 1.0E-06 GTTCTTATTTGCTTA 15 V_NFKB_C_M00208 TRANSFAC - 58518595 58518606 7.0E-06 AGGGATTTCCCC 12 V_NFKB_Q6_01_M00774 TRANSFAC + 58518591 58518606 1.0E-06 GGAAGGGGAAATCCCT 16 V_BTEB3_Q5_M01865 TRANSFAC + 58522157 58522169 1.0E-05 GAAAGGGAGGAGA 13 V_SOX14_05_M02902 TRANSFAC - 58523653 58523667 7.0E-06 CTTACACAAATGTGT 15 V_GATA2_02_M00348 TRANSFAC - 58521668 58521677 2.0E-06 AGAGATAACA 10 V_NF1_Q6_01_M00806 TRANSFAC - 58521646 58521662 3.0E-06 CTGGATGCTAGCCAAAG 17 V_RORA1_01_M00156 TRANSFAC + 58522172 58522184 4.0E-06 TTATAAGGGTCAT 13 V_MAFB_05_M02775 TRANSFAC + 58521975 58521991 7.0E-06 TTATTTGCTTACATGTT 17 V_IRF2_Q6_M01882 TRANSFAC + 58525572 58525587 7.0E-06 TGGGAAAAGAAAGGGA 16 V_CEBP_C_M00201 TRANSFAC - 58523640 58523657 1.0E-06 TGTGTTACGTAATCTACT 18 V_RP58_01_M00532 TRANSFAC - 58518553 58518564 8.0E-06 GACACATCTGTG 12 V_P50P50_Q3_M01223 TRANSFAC + 58518594 58518606 7.0E-06 AGGGGAAATCCCT 13 V_P50P50_Q3_M01223 TRANSFAC - 58518595 58518607 1.0E-06 GAGGGATTTCCCC 13 V_EAR2_Q2_M01728 TRANSFAC + 58521895 58521908 5.0E-06 TACCCTTTGCCCCT 14 V_HNF3_Q6_01_M01012 TRANSFAC + 58521971 58521988 8.0E-06 GTTCTTATTTGCTTACAT 18 V_P50RELAP65_Q5_01_M01224 TRANSFAC - 58518593 58518604 6.0E-06 GGATTTCCCCTT 12 V_PPAR_DR1_Q2_M00763 TRANSFAC - 58521920 58521932 1.0E-05 TGAACTTTGTTCA 13 V_HEN1_01_M00068 TRANSFAC - 58518547 58518568 9.0E-06 CAAGGACACATCTGTGGCACTT 22 V_TCFAP2E_04_M02926 TRANSFAC + 58525581 58525594 5.0E-06 AAAGGGAAAAAAGA 14 V_PPARGRXRA_01_M02262 TRANSFAC - 58521895 58521909 4.0E-06 CAGGGGCAAAGGGTA 15 V_TRF1_01_M01237 TRANSFAC + 58521955 58521969 3.0E-06 CTAGGGTTAGGGACA 15 V_TAL1_Q6_M00993 TRANSFAC + 58521625 58521634 1.0E-06 TCCATCTGCT 10 V_PR_Q2_M00960 TRANSFAC - 58521910 58521919 7.0E-06 GAGAGAACAG 10 V_TBX18_01_M01262 TRANSFAC + 58518568 58518586 5.0E-06 GGAGGTGAAATTCTCAAGT 19 V_E4BP4_01_M00045 TRANSFAC + 58523644 58523655 4.0E-06 GATTACGTAACA 12 V_E4BP4_01_M00045 TRANSFAC - 58523644 58523655 4.0E-06 TGTTACGTAATC 12 V_HNF4_01_B_M00411 TRANSFAC - 58521894 58521908 5.0E-06 AGGGGCAAAGGGTAG 15 V_GMEB1_03_M02761 TRANSFAC + 58523642 58523658 2.0E-06 TAGATTACGTAACACAT 17 V_PXRRXR_02_M01153 TRANSFAC - 58521723 58521730 1.0E-05 AGAGTTCA 8 V_IRF3_Q3_M01279 TRANSFAC - 58525581 58525593 1.0E-06 CTTTTTTCCCTTT 13 V_MAZ_Q6_01_M02023 TRANSFAC - 58522939 58522952 9.0E-06 GTGGGAGGAGAGAA 14 V_IRF_Q6_M00772 TRANSFAC - 58525574 58525588 3.0E-06 TTCCCTTTCTTTTCC 15 V_MATH1_Q2_M01716 TRANSFAC + 58518656 58518665 9.0E-06 CCACCTGGTG 10 V_PBX1_01_M00096 TRANSFAC + 58525531 58525539 2.0E-06 ATCAATCAA 9 V_SPIB_01_M01204 TRANSFAC - 58521687 58521703 1.0E-05 AATAAGAGGAACACTGA 17 V_OCAB_Q6_M02113 TRANSFAC + 58521733 58521743 4.0E-06 AACTGCAAATC 11 V_NCX_02_M01420 TRANSFAC - 58521969 58521985 1.0E-05 TAAGCAAATAAGAACTT 17 V_HNF4A_Q6_01_M02016 TRANSFAC + 58521921 58521935 1.0E-06 GAACAAAGTTCAGCT 15 V_HNF4_DR1_Q3_M00764 TRANSFAC - 58521920 58521932 5.0E-06 TGAACTTTGTTCA 13 V_GATA5_04_M02860 TRANSFAC - 58521664 58521680 1.0E-05 GTAAGAGATAACAGTGG 17 V_CTCF_02_M01259 TRANSFAC - 58518653 58518672 0.0E+00 CTGTGGCCACCAGGTGGCGG 20 V_CTCF_01_M01200 TRANSFAC - 58518651 58518670 0.0E+00 GTGGCCACCAGGTGGCGGCC 20 V_TFIII_Q6_M00706 TRANSFAC - 58523090 58523098 6.0E-06 AGAGGGAGG 9 V_VBP_01_M00228 TRANSFAC - 58523645 58523654 1.0E-06 GTTACGTAAT 10 V_ELF1_Q6_M00746 TRANSFAC + 58518591 58518602 1.0E-05 GGAAGGGGAAAT 12 V_OCT1_Q6_M00195 TRANSFAC - 58521974 58521988 7.0E-06 ATGTAAGCAAATAAG 15 V_FOXJ3_06_M02855 TRANSFAC - 58523616 58523632 3.0E-06 CAAACCCAAACAAAGTG 17 V_FOXJ3_06_M02855 TRANSFAC + 58525502 58525518 7.0E-06 AAGGGCCAAACAAAGTA 17 V_GATA3_02_M00350 TRANSFAC - 58521668 58521677 2.0E-06 AGAGATAACA 10 V_HNF4_Q6_01_M01031 TRANSFAC + 58521920 58521933 5.0E-06 TGAACAAAGTTCAG 14 V_FOXA2_03_M02260 TRANSFAC + 58523734 58523745 9.0E-06 TGTTGACTCTGA 12 V_PBX1_02_M00124 TRANSFAC + 58525528 58525542 1.0E-06 CCTATCAATCAAAAG 15 V_PBX1_03_M01017 TRANSFAC + 58525529 58525540 1.0E-06 CTATCAATCAAA 12 V_CEBPB_Q6_M01896 TRANSFAC - 58521605 58521614 4.0E-06 TTGTGAAATA 10 V_TITF1_Q3_M00432 TRANSFAC + 58518579 58518588 8.0E-06 TCTCAAGTTT 10 V_CREBP1_01_M00040 TRANSFAC + 58523646 58523653 7.0E-06 TTACGTAA 8 V_CREBP1_01_M00040 TRANSFAC - 58523646 58523653 7.0E-06 TTACGTAA 8 V_GATA2_03_M00349 TRANSFAC - 58521668 58521677 2.0E-06 AGAGATAACA 10 V_HFH3_01_M00289 TRANSFAC + 58521973 58521985 3.0E-06 TCTTATTTGCTTA 13 V_EWSR1FLI1_01_M02252 TRANSFAC - 58522085 58522102 6.0E-06 TGAGGTCAGGAAGGAAGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 58523082 58523099 1.0E-06 GAGAGGGAGGAAGGAGAG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 58523086 58523103 0.0E+00 GGAAGAGAGGGAGGAAGG 18 V_VDR_Q3_M00444 TRANSFAC - 58523083 58523097 8.0E-06 GAGGGAGGAAGGAGA 15 V_SMAD3_Q6_M00701 TRANSFAC - 58525541 58525549 1.0E-05 TGTCTGCCT 9 V_HLF_01_M00260 TRANSFAC - 58523645 58523654 0.0E+00 GTTACGTAAT 10 V_HNF3B_Q6_M02014 TRANSFAC + 58521975 58521983 1.0E-05 TTATTTGCT 9 V_CEBP_Q2_01_M00912 TRANSFAC + 58523629 58523640 2.0E-06 TTTGCACAATAA 12 V_HNF4_01_M00134 TRANSFAC - 58521892 58521910 3.0E-06 GCAGGGGCAAAGGGTAGGA 19 V_GATA6_04_M02757 TRANSFAC - 58521664 58521680 1.0E-05 GTAAGAGATAACAGTGG 17 V_TAACC_B_M00331 TRANSFAC + 58525593 58525615 9.0E-06 GAACACATAAGAAGACCACAAGC 23 V_LTF_Q6_M01692 TRANSFAC - 58522291 58522299 6.0E-06 GGCACTTGC 9 V_PBX1_Q3_M02028 TRANSFAC + 58525531 58525539 2.0E-06 ATCAATCAA 9 V_CEBPE_01_M01772 TRANSFAC + 58523645 58523654 7.0E-06 ATTACGTAAC 10 V_CEBPE_01_M01772 TRANSFAC - 58523645 58523654 7.0E-06 GTTACGTAAT 10 V_PAX4_04_M00380 TRANSFAC + 58525585 58525614 9.0E-06 GGAAAAAAGAACACATAAGAAGACCACAAG 30 PPARG_RXRA_MA0065.2 JASPAR - 58521895 58521909 4.0E-06 CAGGGGCAAAGGGTA 15 V_NF1_Q6_M00193 TRANSFAC + 58521646 58521663 1.0E-06 CTTTGGCTAGCATCCAGG 18 V_CEBPA_Q6_M01866 TRANSFAC - 58523628 58523640 3.0E-06 TTATTGTGCAAAC 13 V_NANOG_02_M01247 TRANSFAC + 58525571 58525590 1.0E-06 TTGGGAAAAGAAAGGGAAAA 20 V_T3RALPHA_Q6_M01724 TRANSFAC - 58522094 58522104 0.0E+00 GTTGAGGTCAG 11 V_GATA1_06_M00347 TRANSFAC - 58521668 58521677 8.0E-06 AGAGATAACA 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.