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CAPS


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
828 calcyphosine chr19 +5909192 - 5914692 5914192

Transcription Factor Binding Sites

 
Download all TFBS in the CAPS promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
SOX10_HMG_full_dimeric_14_1 SELEX + 5914137 5914150 7.0E-06 TGAGTAAGCAGTCA 14
HOXC13_homeodomain_DBD_monomeric_11_1 SELEX + 5911587 5911597 3.0E-06 TCTCATAAAAC 11
EMX2_homeodomain_DBD_dimeric_14_1 SELEX + 5911523 5911536 8.0E-06 TATTTAAATAATTC 14
EMX2_homeodomain_DBD_dimeric_14_1 SELEX - 5911523 5911536 7.0E-06 GAATTATTTAAATA 14
FOXL1_forkhead_full_dimeric_13_1 SELEX - 5909349 5909361 0.0E+00 TAAAAACAAACAA 13
POU5F1P1_POU_DBD_monomeric_9_1 SELEX + 5911523 5911531 9.0E-06 TATTTAAAT 9
POU5F1P1_POU_DBD_monomeric_9_1 SELEX - 5911524 5911532 9.0E-06 TATTTAAAT 9
TBX1_TBX_DBD_dimeric_23_1 SELEX + 5910055 5910077 6.0E-06 TTTCAGACCAGAAAGGTCGGAGG 23
HOXD13_homeodomain_DBD_monomeric_11_1 SELEX + 5911587 5911597 3.0E-06 TCTCATAAAAC 11
NFIL3_MA0025.1 JASPAR - 5911603 5911613 8.0E-06 TGATGTAACAT 11
NFIL3_MA0025.1 JASPAR - 5916197 5916207 1.0E-06 TTATGTAAGAT 11
SOX8_HMG_DBD_dimeric_14_1 SELEX + 5914137 5914150 6.0E-06 TGAGTAAGCAGTCA 14
BARHL2_homeodomain_full_dimeric_16_1 SELEX + 5916205 5916220 5.0E-06 TAAATGTTCCAAAACA 16
LEF1_HMG_DBD_monomeric_15_1 SELEX + 5911500 5911514 5.0E-06 AGACATGAAAGTATT 15
Barhl1_homeodomain_DBD_dimeric_16_1 SELEX + 5916205 5916220 5.0E-06 TAAATGTTCCAAAACA 16
Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 5909350 5909360 1.0E-06 AAAAACAAACA 11
HOXD13_homeodomain_DBD_monomeric_10_1 SELEX + 5911588 5911597 7.0E-06 CTCATAAAAC 10
SP1_MA0079.2 JASPAR + 5914059 5914068 9.0E-06 CCCCTCCTCC 10
FOXI1_MA0042.1 JASPAR + 5909347 5909358 1.0E-06 TCTTGTTTGTTT 12
znf143_MA0088.1 JASPAR - 5910199 5910218 1.0E-05 CAGGCCCCAGCCTGCCTTTC 20
Lhx3_MA0135.1 JASPAR + 5911523 5911535 2.0E-06 TATTTAAATAATT 13
TFCP2_CP2_full_dimer-of-dimers_16_1 SELEX - 5910226 5910241 9.0E-06 TCCGGTTTATTCTTGA 16
FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 5909350 5909360 1.0E-06 AAAAACAAACA 11
PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 5913948 5913962 7.0E-06 AGAGAGGGAAAGGGA 15
FEV_MA0156.1 JASPAR - 5910244 5910251 1.0E-05 CAGGAAAT 8
HOXB13_homeodomain_DBD_monomeric_11_1 SELEX + 5911587 5911597 5.0E-06 TCTCATAAAAC 11
HOXA13_homeodomain_full_monomeric_11_1 SELEX + 5911587 5911597 3.0E-06 TCTCATAAAAC 11
POU2F1_POU_DBD_monomeric_12_1 SELEX - 5911523 5911534 4.0E-06 ATTATTTAAATA 12
Hoxd9_homeodomain_DBD_monomeric_9_2 SELEX + 5911588 5911596 1.0E-05 CTCATAAAA 9
FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 5909350 5909362 3.0E-06 TTAAAAACAAACA 13
Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 5909344 5909356 5.0E-06 ACAAACAAGAACA 13
V_MYB_Q6_M00183 TRANSFAC - 5914131 5914140 9.0E-06 CTCAACTGCC 10
V_MEQ_01_M02049 TRANSFAC + 5916215 5916223 4.0E-06 AAAACACAT 9
V_FOXP1_01_M00987 TRANSFAC + 5909343 5909362 7.0E-06 GTGTTCTTGTTTGTTTTTAA 20
V_CDP_03_M01342 TRANSFAC + 5910236 5910252 1.0E-05 ACCGGATGATTTCCTGG 17
V_HNF3B_01_M00131 TRANSFAC + 5909345 5909359 2.0E-06 GTTCTTGTTTGTTTT 15
V_STAT5A_Q6_M01890 TRANSFAC + 5911582 5911594 8.0E-06 TGATTTCTCATAA 13
V_TST1_02_M01316 TRANSFAC + 5911520 5911536 6.0E-06 GCCTATTTAAATAATTC 17
V_TST1_02_M01316 TRANSFAC - 5911523 5911539 3.0E-06 CCAGAATTATTTAAATA 17
V_DBX1_01_M01483 TRANSFAC + 5911523 5911539 1.0E-05 TATTTAAATAATTCTGG 17
V_XVENT1_01_M00445 TRANSFAC + 5910278 5910290 7.0E-06 GTGTTATTTGTGC 13
V_FREAC7_01_M00293 TRANSFAC - 5909346 5909361 2.0E-06 TAAAAACAAACAAGAA 16
V_TCFE2A_04_M02927 TRANSFAC + 5911565 5911581 9.0E-06 GCAGCCAGATGTCACCA 17
V_GATA2_02_M00348 TRANSFAC + 5911310 5911319 7.0E-06 AGAGATAAGG 10
V_MYB_03_M02883 TRANSFAC - 5914127 5914142 9.0E-06 TACTCAACTGCCAGCC 16
V_FOXD3_01_M00130 TRANSFAC + 5909347 5909358 9.0E-06 TCTTGTTTGTTT 12
V_BCL6_01_M01183 TRANSFAC + 5909352 5909367 1.0E-06 TTTGTTTTTAAGCTTT 16
V_FOXO3A_Q1_M01137 TRANSFAC - 5909350 5909361 6.0E-06 TAAAAACAAACA 12
V_SOX11_04_M02899 TRANSFAC - 5911524 5911537 4.0E-06 AGAATTATTTAAAT 14
V_GLI1_01_M01702 TRANSFAC + 5910076 5910086 4.0E-06 GGCCACCCACG 11
V_P53_DECAMER_Q2_M00761 TRANSFAC - 5914010 5914019 1.0E-06 AGACAAGTCC 10
V_HNF3_Q6_01_M01012 TRANSFAC + 5909345 5909362 6.0E-06 GTTCTTGTTTGTTTTTAA 18
V_HNF3_Q6_01_M01012 TRANSFAC - 5909394 5909411 9.0E-06 CTTTGTGTTTGCATTGCC 18
V_CUX1_03_M02958 TRANSFAC + 5910236 5910252 1.0E-05 ACCGGATGATTTCCTGG 17
V_SP1_03_M02281 TRANSFAC + 5914059 5914068 9.0E-06 CCCCTCCTCC 10
V_LHX3_01_M01471 TRANSFAC - 5911521 5911537 2.0E-06 AGAATTATTTAAATAGG 17
V_LHX3_01_M01471 TRANSFAC + 5911522 5911538 7.0E-06 CTATTTAAATAATTCTG 17
V_PPAR_DR1_Q2_M00763 TRANSFAC - 5915513 5915525 3.0E-06 GGACCTTTGTCCC 13
V_HOXD13_01_M01404 TRANSFAC + 5911585 5911600 5.0E-06 TTTCTCATAAAACTGA 16
V_TCFAP2E_04_M02926 TRANSFAC - 5911300 5911313 5.0E-06 CTCTAGAAAAAATG 14
V_TCFAP2E_04_M02926 TRANSFAC + 5911467 5911480 0.0E+00 CACAGAAAAAAAAA 14
V_HOXA13_03_M01430 TRANSFAC + 5911584 5911599 2.0E-06 ATTTCTCATAAAACTG 16
V_HOXC13_01_M01317 TRANSFAC + 5911584 5911599 0.0E+00 ATTTCTCATAAAACTG 16
V_MEF2A_Q6_M02024 TRANSFAC + 5911523 5911532 8.0E-06 TATTTAAATA 10
V_MEF2A_Q6_M02024 TRANSFAC - 5911523 5911532 8.0E-06 TATTTAAATA 10
V_TAL1_GATA1_01_M02243 TRANSFAC + 5911301 5911318 2.0E-06 ATTTTTTCTAGAGATAAG 18
V_PPARGRXRA_01_M02262 TRANSFAC + 5915511 5915525 3.0E-06 GTGGGACAAAGGTCC 15
V_GLI3_02_M01704 TRANSFAC + 5910076 5910086 9.0E-06 GGCCACCCACG 11
V_TCF3_04_M02816 TRANSFAC + 5911499 5911515 8.0E-06 TAGACATGAAAGTATTT 17
V_FOXA2_02_M02853 TRANSFAC - 5910274 5910288 2.0E-06 ACAAATAACACAGAG 15
V_DBP_Q6_01_M01872 TRANSFAC - 5916200 5916207 5.0E-06 TTATGTAA 8
V_LMX1_01_M01409 TRANSFAC - 5911521 5911537 3.0E-06 AGAATTATTTAAATAGG 17
V_LMX1_01_M01409 TRANSFAC + 5911522 5911538 9.0E-06 CTATTTAAATAATTCTG 17
V_ZFP105_03_M02827 TRANSFAC - 5909346 5909360 2.0E-06 AAAAACAAACAAGAA 15
V_HNF3G_Q4_M02015 TRANSFAC + 5909350 5909357 7.0E-06 TGTTTGTT 8
V_SOX8_04_M02912 TRANSFAC - 5916198 5916211 6.0E-06 ACATTTATGTAAGA 14
V_ZBP89_Q4_M01816 TRANSFAC + 5914167 5914176 4.0E-06 CCCTCCCCCA 10
V_MAZ_Q6_01_M02023 TRANSFAC - 5914162 5914175 2.0E-06 GGGGGAGGGATGGG 14
V_HNF3_Q6_M00791 TRANSFAC - 5909348 5909360 1.0E-06 AAAAACAAACAAG 13
V_HNF3ALPHA_Q6_M00724 TRANSFAC + 5909350 5909360 0.0E+00 TGTTTGTTTTT 11
V_HMX1_01_M00433 TRANSFAC - 5914007 5914016 5.0E-06 CAAGTCCGTG 10
V_SOX18_03_M02801 TRANSFAC - 5911523 5911538 9.0E-06 CAGAATTATTTAAATA 16
V_REST_01_M01256 TRANSFAC + 5914101 5914122 2.0E-06 ATCTGGCTCTGTCCCAGGCCCT 22
Tal1_Gata1_MA0140.1 JASPAR + 5911301 5911318 2.0E-06 ATTTTTTCTAGAGATAAG 18
V_PIT1_01_M01465 TRANSFAC + 5911520 5911536 6.0E-06 GCCTATTTAAATAATTC 17
V_PIT1_01_M01465 TRANSFAC - 5911523 5911539 4.0E-06 CCAGAATTATTTAAATA 17
V_TCF7_03_M02817 TRANSFAC + 5911499 5911515 9.0E-06 TAGACATGAAAGTATTT 17
V_HFH1_01_M00129 TRANSFAC + 5909347 5909358 9.0E-06 TCTTGTTTGTTT 12
V_CDC5_01_M00478 TRANSFAC - 5911601 5911612 8.0E-06 GATGTAACATCA 12
V_HB24_01_M01399 TRANSFAC + 5911520 5911534 8.0E-06 GCCTATTTAAATAAT 15
V_HNF4_DR1_Q3_M00764 TRANSFAC - 5915513 5915525 4.0E-06 GGACCTTTGTCCC 13
V_STAT4_Q5_M02117 TRANSFAC - 5911585 5911594 2.0E-06 TTATGAGAAA 10
V_PMX2B_01_M01356 TRANSFAC - 5911522 5911538 9.0E-06 CAGAATTATTTAAATAG 17
V_TBP_06_M02814 TRANSFAC + 5911521 5911536 1.0E-06 CCTATTTAAATAATTC 16
V_BLIMP1_Q6_M01066 TRANSFAC + 5913947 5913962 1.0E-06 CAGAGAGGGAAAGGGA 16
V_LIM1_01_M01418 TRANSFAC - 5911521 5911537 1.0E-06 AGAATTATTTAAATAGG 17
V_ICSBP_Q6_M00699 TRANSFAC + 5911501 5911512 4.0E-06 GACATGAAAGTA 12
V_FOXO1_Q5_M01216 TRANSFAC - 5909352 5909360 1.0E-06 AAAAACAAA 9
V_TFIII_Q6_M00706 TRANSFAC + 5910263 5910271 6.0E-06 AGAGGGAGG 9
V_VBP_01_M00228 TRANSFAC + 5911605 5911614 8.0E-06 GTTACATCAG 10
V_GLI3_01_M01596 TRANSFAC - 5910075 5910085 3.0E-06 GTGGGTGGCCT 11
V_SP4_Q5_M01273 TRANSFAC - 5915437 5915447 7.0E-06 GCCCCTCCCCG 11
V_ZFP105_04_M02931 TRANSFAC + 5911522 5911538 1.0E-06 CTATTTAAATAATTCTG 17
V_AML2_Q3_01_M01854 TRANSFAC + 5915424 5915434 2.0E-06 CCACACCACAG 11
V_HAND1E47_01_M00222 TRANSFAC + 5914095 5914110 6.0E-06 ACAGGGATCTGGCTCT 16
V_LBP9_01_M01592 TRANSFAC + 5910227 5910243 8.0E-06 CAAGAATAAACCGGATG 17
V_GLI2_01_M01703 TRANSFAC + 5910076 5910086 1.0E-05 GGCCACCCACG 11
V_FAC1_01_M00456 TRANSFAC - 5910275 5910288 6.0E-06 ACAAATAACACAGA 14
V_DR1_Q3_M00762 TRANSFAC + 5915513 5915525 2.0E-06 GGGACAAAGGTCC 13
V_ZBTB3_03_M02825 TRANSFAC - 5914081 5914097 7.0E-06 TGTGGCACTGCATCCCT 17
V_EBNA1_01_M01745 TRANSFAC + 5909184 5909199 8.0E-06 GAAAGCCACTGCTGTC 8
V_PLAG1_01_M01778 TRANSFAC - 5915393 5915408 8.0E-06 GGGGCCCAGGGAAGGG 16
V_NANOG_01_M01123 TRANSFAC + 5910148 5910159 7.0E-06 GGGCCCATTTTC 12
V_HDX_01_M01333 TRANSFAC - 5911577 5911593 1.0E-06 TATGAGAAATCATGGTG 17
V_TCF7_04_M02921 TRANSFAC - 5911582 5911596 9.0E-06 TTTTATGAGAAATCA 15
V_SMAD3_03_M02794 TRANSFAC + 5909328 5909344 3.0E-06 TTAACCCAGACAGAAGT 17
V_LMX1B_01_M01363 TRANSFAC + 5911521 5911537 3.0E-06 CCTATTTAAATAATTCT 17
V_LMX1B_01_M01363 TRANSFAC - 5911522 5911538 8.0E-06 CAGAATTATTTAAATAG 17
V_STAT1STAT1_Q3_M01212 TRANSFAC + 5911584 5911596 3.0E-06 ATTTCTCATAAAA 13
V_P53_04_M01652 TRANSFAC - 5910202 5910221 5.0E-06 AGACAGGCCCCAGCCTGCCT 20
V_STAT6_02_M00500 TRANSFAC + 5910243 5910250 1.0E-05 GATTTCCT 8
V_ZFP281_01_M01597 TRANSFAC - 5914166 5914176 9.0E-06 TGGGGGAGGGA 11
V_SRF_06_M02916 TRANSFAC - 5909347 5909363 4.0E-06 CTTAAAAACAAACAAGA 17
V_HFH3_01_M00289 TRANSFAC + 5909347 5909359 1.0E-06 TCTTGTTTGTTTT 13
V_FOXJ2_01_M00422 TRANSFAC - 5909345 5909362 2.0E-06 TTAAAAACAAACAAGAAC 18
V_FOXO1_01_M00473 TRANSFAC - 5909352 5909361 9.0E-06 TAAAAACAAA 10
V_HNF3B_Q6_M02014 TRANSFAC + 5909349 5909357 1.0E-05 TTGTTTGTT 9
V_FOXO4_01_M00472 TRANSFAC - 5909350 5909360 5.0E-06 AAAAACAAACA 11
V_LHX5_01_M01353 TRANSFAC - 5911521 5911537 3.0E-06 AGAATTATTTAAATAGG 17
V_GATA6_04_M02757 TRANSFAC + 5911307 5911323 8.0E-06 TCTAGAGATAAGGTCTC 17
V_TCF3_05_M02920 TRANSFAC + 5911467 5911481 6.0E-06 CACAGAAAAAAAAAT 15
V_FEV_01_M02269 TRANSFAC - 5910244 5910251 1.0E-05 CAGGAAAT 8
V_COUP_DR1_Q6_M00765 TRANSFAC - 5915513 5915525 2.0E-06 GGACCTTTGTCCC 13
V_STAT1_05_M01260 TRANSFAC - 5911576 5911597 2.0E-06 GTTTTATGAGAAATCATGGTGA 22
V_SOX9_Q4_M01284 TRANSFAC + 5910191 5910201 4.0E-06 GTACAAAGGAA 11
PPARG_RXRA_MA0065.2 JASPAR + 5915511 5915525 3.0E-06 GTGGGACAAAGGTCC 15
V_PPARA_01_M00242 TRANSFAC + 5915506 5915525 1.0E-05 CGGAGGTGGGACAAAGGTCC 20
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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