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CAPN3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 825 calpain 3, (p94) chr15 + 42646697 - 42652197 42651697 Transcription Factor Binding Sites   Download all TFBS in the CAPN3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints PITX3_homeodomain_DBD_monomeric_9_1 SELEX - 42656031 42656039 1.0E-05 TTTAATCCC 9 Arx_homeodomain_DBD_dimeric_13_1 SELEX + 42655948 42655960 5.0E-06 TTAATTCATTTAA 13 Arx_homeodomain_DBD_dimeric_13_1 SELEX - 42655948 42655960 1.0E-06 TTAAATGAATTAA 13 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 42651644 42651655 0.0E+00 ACTAAAAATAGA 12 POU1F1_POU_DBD_monomeric_14_1 SELEX + 42655942 42655955 7.0E-06 CATATGTTAATTCA 14 Alx1_homeodomain_DBD_dimeric_13_1 SELEX + 42655948 42655960 4.0E-06 TTAATTCATTTAA 13 Alx1_homeodomain_DBD_dimeric_13_1 SELEX - 42655948 42655960 3.0E-06 TTAAATGAATTAA 13 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 42651644 42651655 0.0E+00 ACTAAAAATAGA 12 POU2F2_POU_DBD_monomeric_11_1 SELEX + 42655943 42655953 1.0E-06 ATATGTTAATT 11 ISX_homeodomain_DBD_dimeric_13_1 SELEX - 42655948 42655960 2.0E-06 TTAAATGAATTAA 13 PITX1_homeodomain_full_monomeric_8_1 SELEX - 42656031 42656038 1.0E-05 TTAATCCC 8 MEF2B_MADS_full_dimeric_12_1 SELEX - 42651644 42651655 0.0E+00 ACTAAAAATAGA 12 PROP1_homeodomain_full_dimeric_11_1 SELEX - 42655949 42655959 4.0E-06 TAAATGAATTA 11 POU3F3_POU_DBD_monomeric_13_1 SELEX + 42655942 42655954 9.0E-06 CATATGTTAATTC 13 MEF2A_MA0052.1 JASPAR + 42651645 42651654 1.0E-06 CTATTTTTAG 10 ALX3_homeodomain_full_dimeric_13_1 SELEX + 42655948 42655960 5.0E-06 TTAATTCATTTAA 13 ALX3_homeodomain_full_dimeric_13_1 SELEX - 42655948 42655960 4.0E-06 TTAAATGAATTAA 13 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX + 42655875 42655888 6.0E-06 GTTAACAGTAAAGA 14 BHLHE22_bHLH_DBD_dimeric_12_1 SELEX - 42655939 42655950 1.0E-05 TAACATATGGAA 12 DRGX_homeodomain_DBD_dimeric_13_1 SELEX + 42655948 42655960 7.0E-06 TTAATTCATTTAA 13 DRGX_homeodomain_DBD_dimeric_13_1 SELEX - 42655948 42655960 4.0E-06 TTAAATGAATTAA 13 Alx4_homeodomain_DBD_dimeric_13_1 SELEX + 42655948 42655960 5.0E-06 TTAATTCATTTAA 13 Alx4_homeodomain_DBD_dimeric_13_1 SELEX - 42655948 42655960 3.0E-06 TTAAATGAATTAA 13 Lhx3_MA0135.1 JASPAR + 42656032 42656044 6.0E-06 GGATTAAATAACT 13 PRRX1_homeodomain_full_dimeric_11_1 SELEX - 42655949 42655959 8.0E-06 TAAATGAATTA 11 CART1_homeodomain_DBD_dimeric_13_1 SELEX + 42655948 42655960 7.0E-06 TTAATTCATTTAA 13 CART1_homeodomain_DBD_dimeric_13_1 SELEX - 42655948 42655960 6.0E-06 TTAAATGAATTAA 13 POU3F1_POU_DBD_monomeric_12_1 SELEX + 42655943 42655954 2.0E-06 ATATGTTAATTC 12 RHOXF1_homeodomain_full_monomeric_8_1 SELEX - 42656031 42656038 1.0E-05 TTAATCCC 8 PITX1_homeodomain_full_monomeric_9_1 SELEX - 42656031 42656039 4.0E-06 TTTAATCCC 9 Uncx_homeodomain_DBD_dimeric_13_1 SELEX - 42655948 42655960 1.0E-06 TTAAATGAATTAA 13 T_TBX_full_dimeric_16_1 SELEX - 42649243 42649258 9.0E-06 TAACAGAAGTGTGTGA 16 POU2F1_POU_DBD_monomeric_12_1 SELEX + 42655942 42655953 2.0E-06 CATATGTTAATT 12 POU3F2_POU_DBD_monomeric_12_1 SELEX + 42655943 42655954 2.0E-06 ATATGTTAATTC 12 BHLHA15_bHLH_DBD_dimeric_10_1 SELEX + 42655940 42655949 9.0E-06 TCCATATGTT 10 BHLHA15_bHLH_DBD_dimeric_10_1 SELEX - 42655940 42655949 7.0E-06 AACATATGGA 10 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 42655875 42655888 4.0E-06 GTTAACAGTAAAGA 14 V_TST1_02_M01316 TRANSFAC - 42655945 42655961 7.0E-06 ATTAAATGAATTAACAT 17 V_TST1_02_M01316 TRANSFAC + 42655946 42655962 9.0E-06 TGTTAATTCATTTAATC 17 V_OBOX5_05_M03066 TRANSFAC - 42655952 42655968 5.0E-06 TGTGAAGATTAAATGAA 17 V_OBOX5_05_M03066 TRANSFAC + 42656027 42656043 0.0E+00 CAGAGGGATTAAATAAC 17 V_OBOX1_01_M01450 TRANSFAC + 42656026 42656042 0.0E+00 TCAGAGGGATTAAATAA 17 V_NF1A_Q6_M02103 TRANSFAC - 42656354 42656369 8.0E-06 TGGGCTCTTAGCCACT 16 V_PROP1_01_M01294 TRANSFAC + 42655949 42655959 2.0E-06 TAATTCATTTA 11 V_FOXJ1_04_M02854 TRANSFAC + 42655961 42655975 1.0E-05 TCTTCACAACAATCC 15 V_MEF2_02_M00231 TRANSFAC - 42651640 42651661 1.0E-06 AGGAAAACTAAAAATAGATGTG 22 V_NFAT3_Q3_M01734 TRANSFAC + 42651652 42651661 1.0E-05 TAGTTTTCCT 10 V_OCT1_01_M00135 TRANSFAC + 42655939 42655957 3.0E-06 TTCCATATGTTAATTCATT 19 V_POU3F2_02_M00464 TRANSFAC + 42655943 42655952 1.0E-06 ATATGTTAAT 10 V_CART1_02_M01362 TRANSFAC - 42656030 42656046 8.0E-06 CGAGTTATTTAATCCCT 17 V_P53_DECAMER_Q2_M00761 TRANSFAC + 42655819 42655828 7.0E-06 AGGCAAGTCC 10 V_VSX1_01_M01335 TRANSFAC - 42656030 42656046 8.0E-06 CGAGTTATTTAATCCCT 17 V_MEF2A_Q6_M02024 TRANSFAC + 42651646 42651655 4.0E-06 TATTTTTAGT 10 V_CDP_04_M01344 TRANSFAC + 42655883 42655897 3.0E-06 TAAAGATAATCGCTA 15 V_BCL6_02_M01185 TRANSFAC - 42649287 42649300 5.0E-06 TTCTTTCCTCAGCT 14 V_HNF1_C_M00206 TRANSFAC + 42655946 42655962 3.0E-06 TGTTAATTCATTTAATC 17 V_TST1_01_M00133 TRANSFAC - 42655943 42655957 7.0E-06 AATGAATTAACATAT 15 V_OBOX5_02_M01480 TRANSFAC - 42655952 42655968 5.0E-06 TGTGAAGATTAAATGAA 17 V_OBOX5_02_M01480 TRANSFAC + 42656027 42656043 0.0E+00 CAGAGGGATTAAATAAC 17 V_SPI1_03_M02078 TRANSFAC + 42655978 42655987 3.0E-06 TGAGGAAGTA 10 V_CEBPE_Q6_M01868 TRANSFAC - 42656420 42656433 8.0E-06 CAAGATTACCTAAG 14 V_ZFP105_03_M02827 TRANSFAC - 42651645 42651659 9.0E-06 GAAAACTAAAAATAG 15 V_OCT1_03_M00137 TRANSFAC + 42647118 42647130 1.0E-06 TTAGTAATGAGAT 13 V_RSRFC4_Q2_M00407 TRANSFAC - 42651641 42651657 0.0E+00 AAACTAAAAATAGATGT 17 V_OCT1_05_M00161 TRANSFAC + 42655934 42655947 3.0E-06 ATGCTTTCCATATG 14 V_OBOX2_01_M01364 TRANSFAC + 42656026 42656042 0.0E+00 TCAGAGGGATTAAATAA 17 V_MEF2_03_M00232 TRANSFAC - 42651640 42651661 0.0E+00 AGGAAAACTAAAAATAGATGTG 22 V_CUX1_04_M02959 TRANSFAC + 42655883 42655897 3.0E-06 TAAAGATAATCGCTA 15 V_PITX3_01_M01343 TRANSFAC + 42656028 42656043 1.0E-05 AGAGGGATTAAATAAC 16 V_HBP1_03_M02762 TRANSFAC - 42655948 42655963 4.0E-06 AGATTAAATGAATTAA 16 V_PIT1_01_M01465 TRANSFAC + 42655946 42655962 4.0E-06 TGTTAATTCATTTAATC 17 V_MEF2_04_M00233 TRANSFAC - 42651640 42651661 4.0E-06 AGGAAAACTAAAAATAGATGTG 22 V_PBX1_05_M01967 TRANSFAC + 42656287 42656300 4.0E-06 ATTGAGTGACACCC 14 V_PAX8_01_M00717 TRANSFAC + 42655896 42655910 3.0E-06 TAATCTTGAGTGAGA 15 V_MEF2_Q6_01_M00941 TRANSFAC + 42651643 42651654 2.0E-06 ATCTATTTTTAG 12 V_CDC5_01_M00478 TRANSFAC - 42655943 42655954 1.0E-06 GAATTAACATAT 12 V_OTX2_Q3_M01719 TRANSFAC + 42656028 42656040 0.0E+00 AGAGGGATTAAAT 13 V_MYOD_Q6_02_M02100 TRANSFAC - 42649283 42649291 8.0E-06 CAGCTGTCT 9 V_AP4_01_M00005 TRANSFAC + 42649281 42649298 1.0E-05 TGAGACAGCTGAGGAAAG 18 V_OBOX2_02_M03064 TRANSFAC + 42656026 42656042 0.0E+00 TCAGAGGGATTAAATAA 17 V_BRN4_01_M01473 TRANSFAC - 42655945 42655961 8.0E-06 ATTAAATGAATTAACAT 17 V_BRN4_01_M01473 TRANSFAC + 42655946 42655962 3.0E-06 TGTTAATTCATTTAATC 17 V_OCT2_01_M01368 TRANSFAC + 42655941 42655956 1.0E-05 CCATATGTTAATTCAT 16 V_TAL1ALPHAE47_01_M00066 TRANSFAC + 42649262 42649277 1.0E-05 ACTCACAGATGGTGCT 16 V_PITX1_01_M01484 TRANSFAC + 42656026 42656042 0.0E+00 TCAGAGGGATTAAATAA 17 V_ZBTB4_04_M02929 TRANSFAC - 42651622 42651637 7.0E-06 GAAACACTGTGAGTAT 16 V_AIRE_01_M00999 TRANSFAC + 42656415 42656440 3.0E-06 TAACACTTAGGTAATCTTGGTCACAT 26 V_GATA6_01_M00462 TRANSFAC + 42655884 42655893 9.0E-06 AAAGATAATC 10 V_DOBOX5_01_M01463 TRANSFAC + 42656027 42656043 2.0E-06 CAGAGGGATTAAATAAC 17 V_OTX2_01_M01387 TRANSFAC + 42656027 42656043 1.0E-06 CAGAGGGATTAAATAAC 17 V_SPIC_02_M02077 TRANSFAC + 42655978 42655987 3.0E-06 TGAGGAAGTA 10 V_RSRFC4_01_M00026 TRANSFAC + 42651642 42651657 0.0E+00 CATCTATTTTTAGTTT 16 V_RSRFC4_01_M00026 TRANSFAC - 42651642 42651657 6.0E-06 AAACTAAAAATAGATG 16 V_BBX_03_M02739 TRANSFAC + 42655949 42655963 1.0E-06 TAATTCATTTAATCT 15 V_BBX_03_M02739 TRANSFAC - 42655949 42655963 3.0E-06 AGATTAAATGAATTA 15 V_OSR1_04_M02888 TRANSFAC + 42656405 42656420 4.0E-06 GCCTGCTACCTAACAC 16 V_OCT1_07_M00248 TRANSFAC + 42655942 42655953 1.0E-06 CATATGTTAATT 12 V_ZIC3_04_M02837 TRANSFAC - 42656295 42656309 6.0E-06 CAACCCCTGGGGTGT 15 V_SOX1_03_M02802 TRANSFAC + 42655946 42655961 0.0E+00 TGTTAATTCATTTAAT 16 V_IRF1_01_M00062 TRANSFAC - 42651647 42651659 3.0E-06 GAAAACTAAAAAT 13 V_PITX2_01_M01447 TRANSFAC + 42656027 42656043 1.0E-06 CAGAGGGATTAAATAAC 17 V_OBOX5_01_M01381 TRANSFAC - 42655952 42655968 8.0E-06 TGTGAAGATTAAATGAA 17 V_OBOX5_01_M01381 TRANSFAC + 42656027 42656043 0.0E+00 CAGAGGGATTAAATAAC 17 V_OBOX3_02_M03065 TRANSFAC + 42656026 42656042 0.0E+00 TCAGAGGGATTAAATAA 17 V_ZID_01_M00085 TRANSFAC + 42651661 42651673 3.0E-06 TGGCTCAAGCATC 13 V_ZIC2_04_M02836 TRANSFAC - 42656295 42656309 8.0E-06 CAACCCCTGGGGTGT 15 V_OTX1_01_M01366 TRANSFAC + 42656027 42656043 4.0E-06 CAGAGGGATTAAATAAC 17 V_OBOX6_06_M03067 TRANSFAC + 42655952 42655968 8.0E-06 TTCATTTAATCTTCACA 17 V_OBOX6_06_M03067 TRANSFAC - 42656027 42656043 0.0E+00 GTTATTTAATCCCTCTG 17 V_OBOX3_01_M01466 TRANSFAC + 42656026 42656042 0.0E+00 TCAGAGGGATTAAATAA 17 V_SPIB_03_M02076 TRANSFAC + 42655978 42655987 1.0E-06 TGAGGAAGTA 10 V_T3RALPHA_Q6_M01724 TRANSFAC + 42656373 42656383 5.0E-06 TCTGAGGTCAG 11

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.