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CLPP Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 8192 ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli) chr19 + 6356462 - 6361962 6361462 Transcription Factor Binding Sites   Download all TFBS in the CLPP promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints PKNOX1_MEIS_DBD_dimeric_12_1 SELEX - 6362167 6362178 4.0E-06 TGCCAGGTGTCA 12 Pknox2_MEIS_DBD_dimeric_12_1 SELEX - 6362167 6362178 3.0E-06 TGCCAGGTGTCA 12 TGIF2_MEIS_DBD_dimeric_12_1 SELEX - 6362167 6362178 7.0E-06 TGCCAGGTGTCA 12 Meis3_MEIS_DBD_dimeric_12_1 SELEX - 6362167 6362178 6.0E-06 TGCCAGGTGTCA 12 TGIF2LX_MEIS_full_dimeric_12_1 SELEX - 6362167 6362178 2.0E-06 TGCCAGGTGTCA 12 Meis2_MEIS_DBD_dimeric_12_1 SELEX - 6362167 6362178 7.0E-06 TGCCAGGTGTCA 12 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 6361327 6361339 6.0E-06 AAAAAAAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 6361328 6361340 6.0E-06 AAAAAAAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 6361329 6361341 6.0E-06 AAAAAAAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 6361330 6361342 6.0E-06 AAAAAAAAAAAAA 13 TGIF1_MEIS_DBD_dimeric_12_1 SELEX - 6362167 6362178 5.0E-06 TGCCAGGTGTCA 12 V_FOXP1_01_M00987 TRANSFAC - 6361326 6361345 1.0E-06 TTCTTTTTTTTTTTTTTTTG 20 V_TCF3_01_M01594 TRANSFAC - 6361332 6361344 7.0E-06 TCTTTTTTTTTTT 13 V_BTEB3_Q5_M01865 TRANSFAC - 6361424 6361436 5.0E-06 GAAAGGGAGGAGC 13 V_ZFX_01_M01593 TRANSFAC - 6361640 6361655 8.0E-06 GGCGAGGCCCCAGCGC 16 V_HMGIY_Q3_M01010 TRANSFAC - 6361333 6361347 1.0E-05 TCTTCTTTTTTTTTT 15 V_EVI1_04_M00081 TRANSFAC + 6361327 6361341 6.0E-06 AAAAAAAAAAAAAAA 15 V_EVI1_04_M00081 TRANSFAC + 6361328 6361342 6.0E-06 AAAAAAAAAAAAAAA 15 V_BCL6_01_M01183 TRANSFAC - 6361327 6361342 0.0E+00 TTTTTTTTTTTTTTTT 16 V_BCL6_01_M01183 TRANSFAC - 6361328 6361343 2.0E-06 CTTTTTTTTTTTTTTT 16 V_BCL6_01_M01183 TRANSFAC - 6361329 6361344 9.0E-06 TCTTTTTTTTTTTTTT 16 V_BCL6_01_M01183 TRANSFAC - 6361331 6361346 3.0E-06 CTTCTTTTTTTTTTTT 16 V_HOXA13_02_M01297 TRANSFAC + 6358215 6358223 9.0E-06 AAATAAAAG 9 V_HNF3_Q6_01_M01012 TRANSFAC - 6361328 6361345 9.0E-06 TTCTTTTTTTTTTTTTTT 18 V_NERF_Q2_M00531 TRANSFAC - 6362154 6362171 1.0E-06 TGTCAGGAAGGAAGTCGG 18 V_PU1_Q4_M01172 TRANSFAC - 6361336 6361354 8.0E-06 CAATTCGTCTTCTTTTTTT 19 V_TCFAP2E_04_M02926 TRANSFAC + 6361322 6361335 2.0E-06 GTCTCAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 6361324 6361337 2.0E-06 CTCAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 6361325 6361338 3.0E-06 TCAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 6361326 6361339 2.0E-06 CAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 6361327 6361340 1.0E-06 AAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 6361328 6361341 1.0E-06 AAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 6361329 6361342 1.0E-06 AAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 6361330 6361343 4.0E-06 AAAAAAAAAAAAAG 14 V_TCFAP2E_04_M02926 TRANSFAC + 6361331 6361344 6.0E-06 AAAAAAAAAAAAGA 14 V_PAX_Q6_M00808 TRANSFAC + 6358211 6358221 8.0E-06 CTGGAAATAAA 11 V_RPC155_01_M01798 TRANSFAC - 6361365 6361380 2.0E-06 TCTCCAGTTCGAGTCC 16 V_ELF4_04_M02850 TRANSFAC + 6361322 6361338 1.0E-06 GTCTCAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC + 6361323 6361339 0.0E+00 TCTCAAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC + 6361324 6361340 3.0E-06 CTCAAAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC + 6361325 6361341 2.0E-06 TCAAAAAAAAAAAAAAA 17 V_GC_01_M00255 TRANSFAC - 6361395 6361408 8.0E-06 AGTGGGCAGGGCTG 14 V_ZFP105_03_M02827 TRANSFAC + 6361324 6361338 1.0E-06 CTCAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 6361325 6361339 2.0E-06 TCAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 6361326 6361340 1.0E-06 CAAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 6361327 6361341 0.0E+00 AAAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 6361328 6361342 0.0E+00 AAAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 6361329 6361343 0.0E+00 AAAAAAAAAAAAAAG 15 V_ZFP105_03_M02827 TRANSFAC + 6361330 6361344 1.0E-06 AAAAAAAAAAAAAGA 15 V_ZFP105_03_M02827 TRANSFAC + 6361331 6361345 0.0E+00 AAAAAAAAAAAAGAA 15 V_SP3_Q3_M00665 TRANSFAC - 6361972 6361985 3.0E-06 AGTCCTGGGGAGGG 14 V_HNF4A_02_M02868 TRANSFAC + 6358504 6358519 6.0E-06 TTTAAGAGTCCAGTGT 16 V_FOXM1_01_M00630 TRANSFAC - 6361406 6361414 7.0E-06 AAATTGAGT 9 V_MTF1_06_M02882 TRANSFAC + 6361326 6361339 8.0E-06 CAAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC + 6361327 6361340 1.0E-06 AAAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC + 6361328 6361341 1.0E-06 AAAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC + 6361329 6361342 1.0E-06 AAAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC + 6361330 6361343 1.0E-06 AAAAAAAAAAAAAG 14 V_MTF1_06_M02882 TRANSFAC + 6361331 6361344 3.0E-06 AAAAAAAAAAAAGA 14 V_FAC1_01_M00456 TRANSFAC + 6361327 6361340 3.0E-06 AAAAAAAAAAAAAA 14 V_FAC1_01_M00456 TRANSFAC + 6361328 6361341 3.0E-06 AAAAAAAAAAAAAA 14 V_FAC1_01_M00456 TRANSFAC + 6361329 6361342 3.0E-06 AAAAAAAAAAAAAA 14 V_FAC1_01_M00456 TRANSFAC + 6361332 6361345 8.0E-06 AAAAAAAAAAAGAA 14 V_CAAT_C_M00200 TRANSFAC - 6361332 6361356 1.0E-06 ACCAATTCGTCTTCTTTTTTTTTTT 25 V_SRF_06_M02916 TRANSFAC + 6361322 6361338 2.0E-06 GTCTCAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 6361323 6361339 0.0E+00 TCTCAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 6361324 6361340 0.0E+00 CTCAAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 6361325 6361341 0.0E+00 TCAAAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 6361326 6361342 0.0E+00 CAAAAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 6361327 6361343 1.0E-06 AAAAAAAAAAAAAAAAG 17 V_SRF_06_M02916 TRANSFAC + 6361328 6361344 0.0E+00 AAAAAAAAAAAAAAAGA 17 V_SRF_06_M02916 TRANSFAC + 6361329 6361345 0.0E+00 AAAAAAAAAAAAAAGAA 17 V_SRF_06_M02916 TRANSFAC + 6361330 6361346 3.0E-06 AAAAAAAAAAAAAGAAG 17 V_ARP1_01_M00155 TRANSFAC + 6361892 6361907 5.0E-06 CGCGCCTATGACATCT 16 V_TCF11MAFG_01_M00284 TRANSFAC + 6361299 6361320 8.0E-06 CCTGGGTGACAGAGCAAGACTC 22 V_BRF1_01_M01747 TRANSFAC - 6361364 6361376 1.0E-05 CAGTTCGAGTCCC 13 V_TCF3_05_M02920 TRANSFAC + 6361323 6361337 4.0E-06 TCTCAAAAAAAAAAA 15 V_NANOG_02_M01247 TRANSFAC + 6361325 6361344 4.0E-06 TCAAAAAAAAAAAAAAAAGA 20 V_NANOG_02_M01247 TRANSFAC + 6361329 6361348 5.0E-06 AAAAAAAAAAAAAAGAAGAC 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.