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ZNF239 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 8187 zinc finger protein 239 chr10 - 44069565 - 44075066 44070065 Transcription Factor Binding Sites   Download all TFBS in the ZNF239 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NKX2-8_homeodomain_full_monomeric_9_1 SELEX - 44071758 44071766 3.0E-06 CCACTTGAA 9 HOXD12_homeodomain_DBD_monomeric_9_1 SELEX - 44070204 44070212 1.0E-06 GTAATAAAA 9 SP8_C2H2_DBD_monomeric_12_1 SELEX + 44070088 44070099 0.0E+00 ACCACGCCCACT 12 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX - 44070203 44070212 0.0E+00 GTAATAAAAA 10 GABPA_MA0062.2 JASPAR - 44070094 44070104 3.0E-06 CCGGAAGTGGG 11 SP3_C2H2_DBD_monomeric_11_1 SELEX + 44070088 44070098 2.0E-06 ACCACGCCCAC 11 Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX - 44070203 44070212 1.0E-06 GTAATAAAAA 10 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 44070088 44070098 7.0E-06 ACCACGCCCAC 11 PROX1_PROX_DBD_dimeric_12_1 SELEX + 44069468 44069479 1.0E-06 CAAGACGCCTTC 12 KLF14_C2H2_DBD_monomeric_14_1 SELEX + 44070087 44070100 0.0E+00 AACCACGCCCACTT 14 FOXL1_forkhead_full_dimeric_13_1 SELEX + 44070210 44070222 3.0E-06 TACAAACAAATAA 13 KLF13_C2H2_full_monomeric_18_1 SELEX + 44070086 44070103 2.0E-06 GAACCACGCCCACTTCCG 18 JDP2_bZIP_full_dimeric_12_1 SELEX - 44068925 44068936 5.0E-06 GATGATGTCACC 12 Hoxc10_homeodomain_DBD_monomeric_10_1 SELEX - 44070203 44070212 7.0E-06 GTAATAAAAA 10 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX - 44070204 44070213 1.0E-06 TGTAATAAAA 10 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX - 44070204 44070212 1.0E-06 GTAATAAAA 9 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 44070211 44070221 6.0E-06 ACAAACAAATA 11 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX - 44070203 44070212 2.0E-06 GTAATAAAAA 10 HOXC11_homeodomain_full_monomeric_11_2 SELEX - 44070203 44070213 1.0E-06 TGTAATAAAAA 11 SP1_MA0079.2 JASPAR - 44069716 44069725 9.0E-06 CCCCTCCTCC 10 FOXI1_MA0042.1 JASPAR - 44070213 44070224 1.0E-06 TCTTATTTGTTT 12 SP4_C2H2_full_monomeric_17_1 SELEX + 44070085 44070101 2.0E-06 CGAACCACGCCCACTTC 17 CREB3_bZIP_full_dimeric_14_1 SELEX - 44068924 44068937 6.0E-06 AGATGATGTCACCA 14 HEY1_bHLH_DBD_dimeric_10_1 SELEX + 44069826 44069835 8.0E-06 CACACGTGCC 10 SP1_C2H2_DBD_monomeric_11_1 SELEX + 44070088 44070098 0.0E+00 ACCACGCCCAC 11 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 44070211 44070221 6.0E-06 ACAAACAAATA 11 HOXA13_homeodomain_full_monomeric_10_1 SELEX - 44070203 44070212 3.0E-06 GTAATAAAAA 10 NKX2-3_homeodomain_full_monomeric_10_1 SELEX - 44071758 44071767 8.0E-06 CCCACTTGAA 10 Klf12_C2H2_DBD_monomeric_15_1 SELEX + 44070087 44070101 2.0E-06 AACCACGCCCACTTC 15 FEV_MA0156.1 JASPAR - 44069932 44069939 1.0E-05 CAGGAAAT 8 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX - 44070203 44070212 3.0E-06 GTAATAAAAA 10 GABPA_ETS_full_monomeric_10_1 SELEX - 44070096 44070105 9.0E-06 GCCGGAAGTG 10 CPEB1_RRM_full_monomeric_8_1 SELEX - 44070203 44070210 4.0E-06 AATAAAAA 8 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 44070205 44070222 8.0E-06 TTTATTACAAACAAATAA 18 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX - 44070203 44070213 2.0E-06 TGTAATAAAAA 11 BATF3_bZIP_DBD_dimeric_14_1 SELEX + 44068924 44068937 2.0E-06 TGGTGACATCATCT 14 CDX2_homeodomain_DBD_monomeric_9_1 SELEX - 44070204 44070212 1.0E-06 GTAATAAAA 9 TP63_p53l_DBD_dimeric_18_1 SELEX - 44070062 44070079 1.0E-05 GGCTTGCTGGGACTTGTA 18 CDX1_homeodomain_DBD_monomeric_9_1 SELEX - 44070204 44070212 1.0E-06 GTAATAAAA 9 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX - 44070203 44070213 0.0E+00 TGTAATAAAAA 11 V_FOXP1_01_M00987 TRANSFAC - 44070209 44070228 2.0E-06 TAATTCTTATTTGTTTGTAA 20 V_DBX1_01_M01483 TRANSFAC + 44070212 44070228 6.0E-06 CAAACAAATAAGAATTA 17 V_FREAC7_01_M00293 TRANSFAC + 44070210 44070225 5.0E-06 TACAAACAAATAAGAA 16 V_SIX6_02_M01398 TRANSFAC - 44066563 44066579 9.0E-06 TTTAGAATATCAAGTCT 17 V_BCL6_01_M01183 TRANSFAC + 44070217 44070232 9.0E-06 AAATAAGAATTATTTT 16 V_GABP_B_M00341 TRANSFAC - 44070094 44070105 4.0E-06 GCCGGAAGTGGG 12 V_OCT1_Q5_01_M00930 TRANSFAC - 44069159 44069169 5.0E-06 TGATTTTCATG 11 V_EAR2_Q2_M01728 TRANSFAC + 44069391 44069404 1.0E-05 TTTCCTCTGACTTT 14 V_FOXJ1_03_M02750 TRANSFAC + 44070208 44070223 4.0E-06 ATTACAAACAAATAAG 16 V_SP1_03_M02281 TRANSFAC - 44069716 44069725 9.0E-06 CCCCTCCTCC 10 V_JUNDM2_03_M02772 TRANSFAC - 44068923 44068938 7.0E-06 CAGATGATGTCACCAG 16 V_HFH4_01_M00742 TRANSFAC - 44070208 44070220 9.0E-06 ATTTGTTTGTAAT 13 V_OCT_C_M00210 TRANSFAC - 44069158 44069170 1.0E-05 TTGATTTTCATGG 13 V_NERF_Q2_M00531 TRANSFAC - 44069925 44069942 9.0E-06 GGTCAGGAAATGGGTGTG 18 V_COUPTF_Q6_M01036 TRANSFAC + 44069933 44069955 1.0E-06 TTTCCTGACCCCTGAACGCCTCT 23 V_HOXD13_01_M01404 TRANSFAC - 44070200 44070215 8.0E-06 TTTGTAATAAAAAACG 16 V_SOX21_03_M02803 TRANSFAC - 44070204 44070219 1.0E-05 TTTGTTTGTAATAAAA 16 V_TCFAP2C_04_M02925 TRANSFAC - 44063305 44063318 9.0E-06 CTGCCCATTGGCTT 14 V_ETS_Q4_M00771 TRANSFAC + 44069928 44069939 3.0E-06 ACCCATTTCCTG 12 V_ELF4_04_M02850 TRANSFAC - 44070199 44070215 7.0E-06 TTTGTAATAAAAAACGA 17 V_HMBOX1_01_M01456 TRANSFAC + 44069421 44069437 2.0E-06 AAGTTCTAGTTAAGAGG 17 V_ZFP105_03_M02827 TRANSFAC + 44070214 44070228 2.0E-06 AACAAATAAGAATTA 15 V_CART1_01_M00416 TRANSFAC - 44070214 44070231 1.0E-06 AAATAATTCTTATTTGTT 18 V_NKX26_01_M01322 TRANSFAC - 44071755 44071770 7.0E-06 GGGCCCACTTGAACTT 16 V_SOX1_04_M02906 TRANSFAC - 44070217 44070231 2.0E-06 AAATAATTCTTATTT 15 V_SPDEF_03_M02811 TRANSFAC - 44070019 44070034 5.0E-06 CAGCATCCGGAATCTG 16 V_P53_03_M01651 TRANSFAC - 44070061 44070080 8.0E-06 CGGCTTGCTGGGACTTGTAT 20 V_PXRRXR_02_M01153 TRANSFAC - 44070115 44070122 1.0E-05 AGAGTTCA 8 V_ER81_02_M02065 TRANSFAC - 44070096 44070105 1.0E-05 GCCGGAAGTG 10 V_ARID3A_02_M02839 TRANSFAC - 44066563 44066577 3.0E-06 TAGAATATCAAGTCT 15 V_HNF3_Q6_M00791 TRANSFAC + 44070211 44070223 7.0E-06 ACAAACAAATAAG 13 V_CDX2_Q5_M00729 TRANSFAC + 44070200 44070213 3.0E-06 CGTTTTTTATTACA 14 V_SOX_Q6_M01014 TRANSFAC - 44063294 44063306 7.0E-06 TTCTTTGTTTCCT 13 V_NKX52_01_M01315 TRANSFAC + 44070211 44070227 7.0E-06 ACAAACAAATAAGAATT 17 V_GADP_01_M01258 TRANSFAC + 44070096 44070107 0.0E+00 CACTTCCGGCGC 12 V_KLF7_03_M02773 TRANSFAC + 44070085 44070100 4.0E-06 CGAACCACGCCCACTT 16 V_MAFK_Q3_M02022 TRANSFAC + 44070165 44070175 9.0E-06 TGAGTCAGCGA 11 V_CREB_Q2_01_M00916 TRANSFAC + 44068925 44068938 7.0E-06 GGTGACATCATCTG 14 V_NKX25_03_M01414 TRANSFAC - 44071755 44071770 3.0E-06 GGGCCCACTTGAACTT 16 V_TCF7_04_M02921 TRANSFAC + 44070204 44070218 0.0E+00 TTTTATTACAAACAA 15 V_FPM315_01_M01587 TRANSFAC + 44069713 44069724 0.0E+00 GAGGGAGGAGGG 12 V_FPM315_01_M01587 TRANSFAC - 44070190 44070201 7.0E-06 CGAGGAGGAGGA 12 V_HNF1B_01_M01425 TRANSFAC - 44069422 44069438 4.0E-06 TCCTCTTAACTAGAACT 17 V_P63_01_M01656 TRANSFAC - 44070061 44070080 1.0E-05 CGGCTTGCTGGGACTTGTAT 20 V_HFH3_01_M00289 TRANSFAC - 44070212 44070224 3.0E-06 TCTTATTTGTTTG 13 V_FOXJ2_01_M00422 TRANSFAC + 44070209 44070226 2.0E-06 TTACAAACAAATAAGAAT 18 V_SIX6_01_M01345 TRANSFAC - 44066563 44066579 6.0E-06 TTTAGAATATCAAGTCT 17 V_NMYC_01_M00055 TRANSFAC + 44069989 44070000 5.0E-06 TCCCACGTGGAA 12 V_PIT1_Q6_M00802 TRANSFAC - 44070210 44070227 2.0E-06 AATTCTTATTTGTTTGTA 18 V_HOXA10_01_M01464 TRANSFAC - 44070200 44070215 2.0E-06 TTTGTAATAAAAAACG 16 V_HMX3_02_M01413 TRANSFAC + 44070211 44070227 8.0E-06 ACAAACAAATAAGAATT 17 V_FEV_01_M02269 TRANSFAC - 44069932 44069939 1.0E-05 CAGGAAAT 8 V_NKX21_01_M01312 TRANSFAC - 44071755 44071770 1.0E-06 GGGCCCACTTGAACTT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.