Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

NETO1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 81832 neuropilin (NRP) and tolloid (TLL)-like 1 chr18 - 70532434 - 70539810 70532934 Transcription Factor Binding Sites   Download all TFBS in the NETO1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints TBX20_TBX_full_monomeric_11_1 SELEX + 70534615 70534625 8.0E-06 GAGGTGTTAAA 11 Egr1_MA0162.1 JASPAR - 70537229 70537239 1.0E-06 TGCGTGGGCGG 11 NEUROD2_bHLH_full_dimeric_10_1 SELEX + 70538628 70538637 4.0E-06 AACATATGGT 10 NEUROD2_bHLH_full_dimeric_10_1 SELEX - 70538628 70538637 0.0E+00 ACCATATGTT 10 HOXC13_homeodomain_DBD_monomeric_11_1 SELEX + 70537243 70537253 7.0E-06 ACTTGTAAAAA 11 TBR1_TBX_DBD_monomeric_10_1 SELEX + 70534616 70534625 2.0E-06 AGGTGTTAAA 10 EGR1_C2H2_full_monomeric_14_1 SELEX + 70537228 70537241 1.0E-06 TCCGCCCACGCACC 14 Sox1_HMG_DBD_dimeric_13_1 SELEX + 70538414 70538426 3.0E-06 ACAATTCCATTCA 13 TCF7L1_HMG_full_monomeric_12_1 SELEX + 70537251 70537262 2.0E-06 AAAGATCAAGGG 12 LEF1_HMG_DBD_monomeric_15_1 SELEX + 70537251 70537265 0.0E+00 AAAGATCAAGGGGAA 15 Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1 SELEX + 70537227 70537242 1.0E-06 ATCCGCCCACGCACCT 16 BHLHE23_bHLH_DBD_dimeric_10_1 SELEX + 70538628 70538637 2.0E-06 AACATATGGT 10 BHLHE23_bHLH_DBD_dimeric_10_1 SELEX - 70538628 70538637 1.0E-06 ACCATATGTT 10 HOXA5_MA0158.1 JASPAR + 70534558 70534565 7.0E-06 CACTAATT 8 SOX2_HMG_full_dimeric_15_1 SELEX + 70538413 70538427 9.0E-06 GACAATTCCATTCAT 15 EGR2_C2H2_full_monomeric_15_1 SELEX + 70537227 70537241 0.0E+00 ATCCGCCCACGCACC 15 BHLHE22_bHLH_DBD_dimeric_12_1 SELEX + 70538627 70538638 0.0E+00 AAACATATGGTC 12 BHLHE22_bHLH_DBD_dimeric_12_1 SELEX - 70538627 70538638 2.0E-06 GACCATATGTTT 12 TBR1_TBX_full_monomeric_11_1 SELEX + 70534615 70534625 4.0E-06 GAGGTGTTAAA 11 SOX14_HMG_DBD_dimeric_13_1 SELEX + 70538414 70538426 6.0E-06 ACAATTCCATTCA 13 OLIG1_bHLH_DBD_dimeric_10_1 SELEX + 70538628 70538637 1.0E-06 AACATATGGT 10 OLIG1_bHLH_DBD_dimeric_10_1 SELEX - 70538628 70538637 1.0E-06 ACCATATGTT 10 Egr3_C2H2_DBD_monomeric_15_1 SELEX + 70537228 70537242 0.0E+00 TCCGCCCACGCACCT 15 SOX14_HMG_DBD_dimeric_12_1 SELEX + 70538414 70538425 7.0E-06 ACAATTCCATTC 12 EGR4_C2H2_DBD_monomeric_16_2 SELEX + 70537227 70537242 0.0E+00 ATCCGCCCACGCACCT 16 TBX2_TBX_full_monomeric_11_1 SELEX + 70534615 70534625 2.0E-06 GAGGTGTTAAA 11 Foxd3_MA0041.1 JASPAR - 70538580 70538591 4.0E-06 ATATGTTGTTTT 12 Atoh1_bHLH_DBD_dimeric_10_1 SELEX + 70538628 70538637 1.0E-06 AACATATGGT 10 Atoh1_bHLH_DBD_dimeric_10_1 SELEX - 70538628 70538637 2.0E-06 ACCATATGTT 10 HOXB13_homeodomain_DBD_monomeric_11_1 SELEX + 70537243 70537253 9.0E-06 ACTTGTAAAAA 11 Myf_MA0055.1 JASPAR - 70536561 70536572 4.0E-06 CAGCAGCAGGTG 12 HOXA13_homeodomain_full_monomeric_11_1 SELEX + 70537243 70537253 1.0E-06 ACTTGTAAAAA 11 TBX20_TBX_DBD_monomeric_15_1 SELEX + 70534612 70534626 3.0E-06 CGAGAGGTGTTAAAG 15 NEUROG2_bHLH_full_dimeric_10_1 SELEX + 70538628 70538637 6.0E-06 AACATATGGT 10 NEUROG2_bHLH_full_dimeric_10_1 SELEX - 70538628 70538637 6.0E-06 ACCATATGTT 10 SRY_HMG_DBD_dimeric_13_1 SELEX + 70538414 70538426 8.0E-06 ACAATTCCATTCA 13 EGR2_C2H2_DBD_monomeric_11_1 SELEX + 70537229 70537239 1.0E-06 CCGCCCACGCA 11 BHLHA15_bHLH_DBD_dimeric_10_1 SELEX + 70538628 70538637 1.0E-06 AACATATGGT 10 BHLHA15_bHLH_DBD_dimeric_10_1 SELEX - 70538628 70538637 1.0E-06 ACCATATGTT 10 NFE2L2_MA0150.1 JASPAR - 70538525 70538535 6.0E-06 ATTACTCAGCA 11 OLIG2_bHLH_full_dimeric_10_1 SELEX + 70538628 70538637 2.0E-06 AACATATGGT 10 OLIG2_bHLH_full_dimeric_10_1 SELEX - 70538628 70538637 1.0E-06 ACCATATGTT 10 Sox1_HMG_DBD_dimeric_15_2 SELEX + 70538413 70538427 7.0E-06 GACAATTCCATTCAT 15 OLIG3_bHLH_DBD_dimeric_10_1 SELEX + 70538628 70538637 2.0E-06 AACATATGGT 10 OLIG3_bHLH_DBD_dimeric_10_1 SELEX - 70538628 70538637 1.0E-06 ACCATATGTT 10 V_SPI1_01_M01203 TRANSFAC - 70536005 70536021 8.0E-06 TGTAGGAGGAAGTGGCG 17 V_STAT5A_Q6_M01890 TRANSFAC + 70538567 70538579 5.0E-06 TTCTTTCTGAGAA 13 V_STAT5A_Q6_M01890 TRANSFAC - 70538571 70538583 1.0E-06 TTTTTTCTCAGAA 13 V_LEF1_04_M02774 TRANSFAC - 70537250 70537266 6.0E-06 TTTCCCCTTGATCTTTT 17 V_ATF5_01_M01295 TRANSFAC - 70537187 70537197 5.0E-06 TCTCTCCCTTT 11 TAL1_TCF3_MA0091.1 JASPAR + 70538626 70538637 3.0E-06 CAAACATATGGT 12 TAL1_TCF3_MA0091.1 JASPAR - 70538628 70538639 1.0E-06 TGACCATATGTT 12 V_FOXD3_01_M00130 TRANSFAC - 70538580 70538591 9.0E-06 ATATGTTGTTTT 12 V_STAT_Q6_M00777 TRANSFAC - 70538609 70538621 4.0E-06 ACCTTTTCTGGGA 13 V_MAFB_03_M02879 TRANSFAC + 70537242 70537256 7.0E-06 TACTTGTAAAAAGAT 15 V_IRF2_Q6_M01882 TRANSFAC - 70538418 70538433 4.0E-06 AGAAAAATGAATGGAA 16 V_HNF4ALPHA_Q6_M00638 TRANSFAC - 70538592 70538604 1.0E-06 CTGAACTTTTCCC 13 V_FOXO3A_Q1_M01137 TRANSFAC + 70538578 70538589 9.0E-06 AAAAAACAACAT 12 V_MAF_Q6_M00648 TRANSFAC - 70536004 70536019 3.0E-06 TAGGAGGAAGTGGCGC 16 V_EGR1_02_M01972 TRANSFAC - 70537229 70537239 1.0E-06 TGCGTGGGCGG 11 V_AFP1_Q6_M00616 TRANSFAC + 70538579 70538589 9.0E-06 AAAAACAACAT 11 V_GM497_04_M02864 TRANSFAC + 70535976 70535991 2.0E-06 CAAGGCACACACGGAC 16 V_TCFAP2E_04_M02926 TRANSFAC + 70537242 70537255 4.0E-06 TACTTGTAAAAAGA 14 V_MEF2A_Q6_M02024 TRANSFAC + 70535961 70535970 5.0E-06 TATTTAAAAC 10 V_PAX_Q6_M00808 TRANSFAC - 70538504 70538514 1.0E-06 CTGGAACTCAA 11 V_STAT4_Q4_M01666 TRANSFAC + 70538571 70538584 6.0E-06 TTCTGAGAAAAAAC 14 V_PDEF_02_M02075 TRANSFAC - 70538468 70538477 8.0E-06 ACAGGATGTA 10 V_CRX_Q4_M00623 TRANSFAC + 70534557 70534569 1.0E-05 CCACTAATTCCAT 13 V_FOXA2_02_M02853 TRANSFAC + 70538579 70538593 9.0E-06 AAAAACAACATATGG 15 V_EGR1_01_M00243 TRANSFAC - 70537229 70537240 4.0E-06 GTGCGTGGGCGG 12 V_RFXDC2_04_M02894 TRANSFAC + 70534566 70534582 8.0E-06 CCATTTAGAGACGGGAA 17 V_MYF_01_M01302 TRANSFAC - 70536561 70536572 4.0E-06 CAGCAGCAGGTG 12 V_ZFP105_03_M02827 TRANSFAC + 70538578 70538592 3.0E-06 AAAAAACAACATATG 15 V_FOXO1_02_M00474 TRANSFAC + 70538471 70538484 9.0E-06 ATCCTGTTTACTTG 14 V_NGFIC_01_M00244 TRANSFAC - 70537229 70537240 2.0E-06 GTGCGTGGGCGG 12 V_XFD3_01_M00269 TRANSFAC - 70538405 70538418 4.0E-06 ATTGTCAATAACAA 14 V_E12_Q6_M00693 TRANSFAC - 70536558 70536568 2.0E-06 AGCAGGTGCCG 11 V_KROX_Q6_M00982 TRANSFAC + 70537228 70537241 1.0E-06 TCCGCCCACGCACC 14 V_ZBP89_Q4_M01816 TRANSFAC - 70534596 70534605 6.0E-06 TCCTCCCCCC 10 V_FOXK1_04_M02856 TRANSFAC + 70538577 70538591 2.0E-06 GAAAAAACAACATAT 15 V_HNF3A_01_M01261 TRANSFAC - 70538474 70538483 2.0E-06 AAGTAAACAG 10 V_EGR1_Q6_M01873 TRANSFAC - 70537229 70537238 7.0E-06 GCGTGGGCGG 10 V_HBP1_03_M02762 TRANSFAC - 70538415 70538430 6.0E-06 AAAATGAATGGAATTG 16 V_PPARG_03_M00528 TRANSFAC + 70538587 70538603 7.0E-06 CATATGGGAAAAGTTCA 17 V_RREB1_01_M00257 TRANSFAC - 70536820 70536833 7.0E-06 ACACAAACACACCA 14 V_HOXA5_03_M02271 TRANSFAC + 70534558 70534565 7.0E-06 CACTAATT 8 V_CETS1P54_01_M00032 TRANSFAC - 70538468 70538477 9.0E-06 ACAGGATGTA 10 V_MAFK_Q3_M02022 TRANSFAC - 70538524 70538534 5.0E-06 TTACTCAGCAA 11 V_STAT4_Q5_M02117 TRANSFAC - 70538570 70538579 9.0E-06 TTCTCAGAAA 10 V_STAT4_Q5_M02117 TRANSFAC + 70538571 70538580 5.0E-06 TTCTGAGAAA 10 V_GATA5_04_M02860 TRANSFAC - 70538681 70538697 1.0E-05 ACAAAAGCTATCAGTTT 17 V_STAT3_03_M01595 TRANSFAC - 70536549 70536564 9.0E-06 GGTGCCGGGAAGCGGA 16 V_EGR2_01_M00246 TRANSFAC - 70537229 70537240 1.0E-06 GTGCGTGGGCGG 12 V_TBX5_01_M01019 TRANSFAC + 70534614 70534625 1.0E-06 AGAGGTGTTAAA 12 V_FOXO1_Q5_M01216 TRANSFAC + 70538579 70538587 5.0E-06 AAAAACAAC 9 V_ELF1_Q6_M00746 TRANSFAC - 70536009 70536020 5.0E-06 GTAGGAGGAAGT 12 V_FAC1_01_M00456 TRANSFAC + 70538579 70538592 9.0E-06 AAAAACAACATATG 14 V_MYOD_Q6_01_M00929 TRANSFAC - 70536555 70536572 4.0E-06 CAGCAGCAGGTGCCGGGA 18 V_TAL1ALPHAE47_01_M00066 TRANSFAC + 70538625 70538640 1.0E-05 GCAAACATATGGTCAA 16 V_NRF2_Q4_M00821 TRANSFAC + 70535363 70535375 5.0E-06 CTCCTTAGTCATG 13 V_TBX15_02_M01264 TRANSFAC + 70534616 70534633 6.0E-06 AGGTGTTAAAGACGCAAA 18 V_STAT1STAT1_Q3_M01212 TRANSFAC - 70538569 70538581 8.0E-06 TTTTCTCAGAAAG 13 V_ETS1_B_M00339 TRANSFAC - 70538463 70538477 7.0E-06 ACAGGATGTAGTGGA 15 V_EGR1_06_M02744 TRANSFAC + 70537228 70537241 2.0E-06 TCCGCCCACGCACC 14 V_SRF_06_M02916 TRANSFAC + 70538573 70538589 4.0E-06 CTGAGAAAAAACAACAT 17 V_PIT1_Q6_M00802 TRANSFAC + 70538421 70538438 1.0E-06 CATTCATTTTTCTTCATA 18 V_MEF2_01_M00006 TRANSFAC - 70538654 70538669 1.0E-05 CTTTCAAAATAACGAC 16 V_MEF2A_05_M01301 TRANSFAC + 70535958 70535969 5.0E-06 AGGTATTTAAAA 12 V_NFE2L2_01_M02263 TRANSFAC - 70538525 70538535 6.0E-06 ATTACTCAGCA 11 V_SOX5_07_M02909 TRANSFAC - 70538408 70538424 4.0E-06 AATGGAATTGTCAATAA 17 V_STAT1_05_M01260 TRANSFAC + 70538568 70538589 4.0E-06 TCTTTCTGAGAAAAAACAACAT 22 V_NF1_Q6_M00193 TRANSFAC + 70538480 70538497 1.0E-05 ACTTGGCAAGCTGCCTTC 18 V_EGR3_01_M00245 TRANSFAC - 70537229 70537240 2.0E-06 GTGCGTGGGCGG 12 V_HSF1_Q6_01_M02017 TRANSFAC - 70538508 70538521 4.0E-06 GTGGATTCTGGAAC 14

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.