Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

UNC93B1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 81622 unc-93 homolog B1 (C. elegans) chr11 - 67771093 - 67776593 67771593 Transcription Factor Binding Sites   Download all TFBS in the UNC93B1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX - 67769800 67769809 8.0E-06 ATCATAAAAA 10 HES5_bHLH_DBD_dimeric_12_1 SELEX + 67776499 67776510 1.0E-05 CGACACGTGGCA 12 Creb3l2_bZIP_DBD_dimeric_12_1 SELEX + 67776499 67776510 7.0E-06 CGACACGTGGCA 12 Creb3l2_bZIP_DBD_dimeric_12_1 SELEX - 67776499 67776510 8.0E-06 TGCCACGTGTCG 12 HOXA10_homeodomain_DBD_monomeric_12_1 SELEX - 67769799 67769810 1.0E-06 AATCATAAAAAA 12 NFIA_NFI_full_dimeric_15_1 SELEX + 67771879 67771893 1.0E-06 TTGGAAAAGTGCCAG 15 NFIA_NFI_full_dimeric_15_1 SELEX - 67771879 67771893 6.0E-06 CTGGCACTTTTCCAA 15 SPIC_ETS_full_monomeric_14_1 SELEX + 67769614 67769627 7.0E-06 AAAAAAAGTAAGCA 14 FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 67769611 67769627 3.0E-06 AAAAAAAAAAGTAAGCA 17 Mafb_bZIP_DBD_monomeric_12_1 SELEX - 67770545 67770556 4.0E-06 AAAATGCTGATG 12 NFIX_NFI_full_dimeric_15_2 SELEX + 67771879 67771893 3.0E-06 TTGGAAAAGTGCCAG 15 NFIX_NFI_full_dimeric_15_2 SELEX - 67771879 67771893 0.0E+00 CTGGCACTTTTCCAA 15 HOXD11_homeodomain_DBD_monomeric_10_1 SELEX - 67769800 67769809 3.0E-06 ATCATAAAAA 10 HOXC11_homeodomain_full_monomeric_11_1 SELEX - 67769800 67769810 7.0E-06 AATCATAAAAA 11 ZIC4_C2H2_DBD_monomeric_15_1 SELEX - 67770985 67770999 9.0E-06 GGCCCCCCGCGGCGG 15 SPIB_ETS_DBD_monomeric_14_1 SELEX - 67770302 67770315 7.0E-06 GGAAACAGGAACTT 14 TFAP2B_TFAP_DBD_dimeric_12_1 SELEX + 67770290 67770301 1.0E-06 TGCCCTGAGGCA 12 TFAP2B_TFAP_DBD_dimeric_12_1 SELEX - 67770290 67770301 1.0E-06 TGCCTCAGGGCA 12 Hoxc10_homeodomain_DBD_monomeric_10_1 SELEX - 67769800 67769809 1.0E-06 ATCATAAAAA 10 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX - 67769801 67769810 4.0E-06 AATCATAAAA 10 HOXC11_homeodomain_full_monomeric_11_2 SELEX - 67769800 67769810 4.0E-06 AATCATAAAAA 11 ZIC3_C2H2_full_monomeric_15_1 SELEX - 67770985 67770999 7.0E-06 GGCCCCCCGCGGCGG 15 HOXC11_homeodomain_DBD_monomeric_11_1 SELEX - 67769800 67769810 2.0E-06 AATCATAAAAA 11 SP1_C2H2_DBD_monomeric_11_1 SELEX + 67770976 67770986 7.0E-06 ACCCCACCCCC 11 NRL_bZIP_DBD_monomeric_11_1 SELEX - 67770546 67770556 3.0E-06 AAAATGCTGAT 11 Hoxa11_homeodomain_DBD_monomeric_12_1 SELEX - 67769799 67769810 8.0E-06 AATCATAAAAAA 12 NFIB_NFI_full_dimeric_15_1 SELEX + 67771879 67771893 1.0E-06 TTGGAAAAGTGCCAG 15 NFIB_NFI_full_dimeric_15_1 SELEX - 67771879 67771893 6.0E-06 CTGGCACTTTTCCAA 15 TFAP2C_TFAP_full_dimeric_12_1 SELEX + 67770290 67770301 3.0E-06 TGCCCTGAGGCA 12 TFAP2C_TFAP_full_dimeric_12_1 SELEX - 67770290 67770301 1.0E-06 TGCCTCAGGGCA 12 CREB3L1_bZIP_full_dimeric_12_1 SELEX + 67776499 67776510 3.0E-06 CGACACGTGGCA 12 CREB3L1_bZIP_full_dimeric_12_1 SELEX - 67776499 67776510 2.0E-06 TGCCACGTGTCG 12 Meis2_MEIS_DBD_dimeric_12_1 SELEX + 67776396 67776407 8.0E-06 TGACAGGTGTAT 12 HOXC10_homeodomain_DBD_monomeric_10_3 SELEX - 67769800 67769809 2.0E-06 ATCATAAAAA 10 Hoxd9_homeodomain_DBD_monomeric_9_2 SELEX - 67769801 67769809 8.0E-06 ATCATAAAA 9 HOXD12_homeodomain_DBD_monomeric_11_1 SELEX - 67769800 67769810 4.0E-06 AATCATAAAAA 11 MAFK_bZIP_full_monomeric_12_1 SELEX - 67770546 67770557 7.0E-06 CAAAATGCTGAT 12 SPI1_ETS_full_monomeric_14_1 SELEX - 67770302 67770315 9.0E-06 GGAAACAGGAACTT 14 IRF3_IRF_full_trimeric_21_1 SELEX - 67770302 67770322 1.0E-06 TGGGGAAGGAAACAGGAACTT 21 TFAP2A_TFAP_DBD_dimeric_12_1 SELEX + 67770290 67770301 1.0E-06 TGCCCTGAGGCA 12 TFAP2A_TFAP_DBD_dimeric_12_1 SELEX - 67770290 67770301 4.0E-06 TGCCTCAGGGCA 12 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX - 67769800 67769810 7.0E-06 AATCATAAAAA 11 HOXC12_homeodomain_DBD_monomeric_11_1 SELEX - 67769800 67769810 8.0E-06 AATCATAAAAA 11 Tcfap2a_TFAP_DBD_dimeric_12_1 SELEX + 67770290 67770301 1.0E-06 TGCCCTGAGGCA 12 Tcfap2a_TFAP_DBD_dimeric_12_1 SELEX - 67770290 67770301 2.0E-06 TGCCTCAGGGCA 12 RREB1_MA0073.1 JASPAR + 67770969 67770988 9.0E-06 CCCCCCAACCCCACCCCCGC 20 RREB1_MA0073.1 JASPAR + 67770971 67770990 7.0E-06 CCCCAACCCCACCCCCGCCG 20 GLIS2_C2H2_DBD_monomeric_14_1 SELEX - 67770986 67770999 4.0E-06 GGCCCCCCGCGGCG 14 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX - 67769800 67769810 6.0E-06 AATCATAAAAA 11 ZIC1_C2H2_full_monomeric_14_1 SELEX - 67770986 67770999 2.0E-06 GGCCCCCCGCGGCG 14 V_HOXA9_01_M01351 TRANSFAC - 67769796 67769812 8.0E-06 GAAATCATAAAAAAGAA 17 V_FOXP1_01_M00987 TRANSFAC - 67769609 67769628 2.0E-06 TTGCTTACTTTTTTTTTTTT 20 V_FOXP1_01_M00987 TRANSFAC - 67769623 67769642 5.0E-06 ATGTTTGCTTTTGCTTGCTT 20 V_FOXP1_01_M00987 TRANSFAC - 67769654 67769673 5.0E-06 GTGTGTGTGTGTGTGTGTAT 20 V_FOXP1_01_M00987 TRANSFAC + 67769785 67769804 9.0E-06 TTAGATGGGGTTTCTTTTTT 20 V_FOXP1_01_M00987 TRANSFAC + 67769799 67769818 2.0E-06 TTTTTTATGATTTCAGTTAT 20 V_USF_Q6_M00187 TRANSFAC - 67776026 67776035 2.0E-06 GTCACGTGGC 10 V_PREP1_01_M01459 TRANSFAC - 67776392 67776407 8.0E-06 ATACACCTGTCAGAGC 16 V_APOLYA_B_M00310 TRANSFAC + 67771767 67771781 2.0E-06 AATTAACTCCATTTC 15 V_MAX_Q6_M01830 TRANSFAC + 67769700 67769711 6.0E-06 CCACACACGTGC 12 V_EVI1_04_M00081 TRANSFAC + 67769610 67769624 8.0E-06 AAAAAAAAAAAGTAA 15 V_BCL6_01_M01183 TRANSFAC - 67769609 67769624 1.0E-06 TTACTTTTTTTTTTTT 16 V_EBOX_Q6_01_M01034 TRANSFAC + 67776027 67776036 4.0E-06 CCACGTGACT 10 V_IRF_Q6_01_M00972 TRANSFAC - 67769794 67769804 5.0E-06 AAAAAAGAAAC 11 V_IRF_Q6_01_M00972 TRANSFAC - 67771062 67771072 6.0E-06 GAAACAGAAAC 11 V_IRF_Q6_01_M00972 TRANSFAC + 67771816 67771826 6.0E-06 AAAACAGAAAT 11 V_IRF2_Q6_M01882 TRANSFAC + 67769609 67769624 1.0E-05 AAAAAAAAAAAAGTAA 16 V_AP2_Q6_01_M00915 TRANSFAC - 67770643 67770655 1.0E-05 CTGTCCCCAGGCC 13 V_IRF3_05_M02767 TRANSFAC - 67769792 67769805 1.0E-05 TAAAAAAGAAACCC 14 V_MAF_Q6_M00648 TRANSFAC - 67771567 67771582 9.0E-06 CGGGAGGAAGTGGCCG 16 V_SP1_02_M01303 TRANSFAC - 67771596 67771606 8.0E-06 GGGGCGGGGGC 11 V_AP4_Q6_02_M01860 TRANSFAC - 67771001 67771013 1.0E-05 GCAGCTGCAGCCA 13 V_GM497_04_M02864 TRANSFAC - 67771677 67771692 7.0E-06 CCCTGCACACACGCGC 16 V_TCFAP2E_04_M02926 TRANSFAC + 67769604 67769617 2.0E-06 GTCTCAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 67769606 67769619 2.0E-06 CTCAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 67769607 67769620 3.0E-06 TCAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 67769608 67769621 9.0E-06 CAAAAAAAAAAAAG 14 V_RPC155_01_M01798 TRANSFAC + 67771717 67771732 4.0E-06 GTGTGAGTTCGAATCC 16 V_ELF4_04_M02850 TRANSFAC + 67769604 67769620 1.0E-06 GTCTCAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC + 67769605 67769621 1.0E-06 TCTCAAAAAAAAAAAAG 17 V_ELF4_04_M02850 TRANSFAC + 67769606 67769622 4.0E-06 CTCAAAAAAAAAAAAGT 17 V_ELF4_04_M02850 TRANSFAC + 67769607 67769623 6.0E-06 TCAAAAAAAAAAAAGTA 17 V_TAL1_Q6_M00993 TRANSFAC - 67770405 67770414 8.0E-06 TCCATCTGCC 10 V_GC_01_M00255 TRANSFAC - 67771499 67771512 9.0E-06 TGGAGGCGGAGCCG 14 V_ZFP105_03_M02827 TRANSFAC + 67769606 67769620 1.0E-06 CTCAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 67769607 67769621 3.0E-06 TCAAAAAAAAAAAAG 15 V_ZFP105_03_M02827 TRANSFAC + 67769608 67769622 8.0E-06 CAAAAAAAAAAAAGT 15 V_ZFP105_03_M02827 TRANSFAC + 67769609 67769623 0.0E+00 AAAAAAAAAAAAGTA 15 V_ZFP105_03_M02827 TRANSFAC - 67769796 67769810 4.0E-06 AATCATAAAAAAGAA 15 V_POLY_C_M00212 TRANSFAC + 67770363 67770380 6.0E-06 GAAAAAAACCTCTCCCTT 18 V_KROX_Q6_M00982 TRANSFAC + 67770978 67770991 9.0E-06 CCCACCCCCGCCGC 14 V_KROX_Q6_M00982 TRANSFAC + 67771593 67771606 2.0E-06 CCTGCCCCCGCCCC 14 V_HOXB9_01_M01426 TRANSFAC - 67769797 67769812 4.0E-06 GAAATCATAAAAAAGA 16 V_IRF_Q6_M00772 TRANSFAC + 67769790 67769804 5.0E-06 TGGGGTTTCTTTTTT 15 V_IRF_Q6_M00772 TRANSFAC + 67771058 67771072 6.0E-06 CGCGGTTTCTGTTTC 15 V_HOXC11_01_M01329 TRANSFAC - 67769798 67769813 2.0E-06 TGAAATCATAAAAAAG 16 V_HNF1_Q6_01_M01011 TRANSFAC + 67769609 67769629 6.0E-06 AAAAAAAAAAAAGTAAGCAAG 21 V_PAX5_01_M00143 TRANSFAC - 67771495 67771522 5.0E-06 GTTCGGGCCATGGAGGCGGAGCCGCCGC 28 V_ISRE_01_M00258 TRANSFAC + 67769792 67769806 3.0E-06 GGGTTTCTTTTTTAT 15 V_ISRE_01_M00258 TRANSFAC + 67771060 67771074 1.0E-06 CGGTTTCTGTTTCCC 15 V_OCT1_04_M00138 TRANSFAC + 67771861 67771883 1.0E-05 TTGAGTTAATGCAAAGCCTTGGA 23 V_SP1SP3_Q4_M01219 TRANSFAC + 67771627 67771637 5.0E-06 CCGCCTCCTCC 11 V_SOX12_04_M02900 TRANSFAC - 67771777 67771792 6.0E-06 CGAGGCACAAAGAAAT 16 V_SPIB_01_M01204 TRANSFAC - 67770299 67770315 2.0E-06 GGAAACAGGAACTTTGC 17 V_RREB1_01_M00257 TRANSFAC + 67770390 67770403 5.0E-06 CCCCACAAACACCC 14 V_RREB1_01_M00257 TRANSFAC + 67770392 67770405 7.0E-06 CCACAAACACCCCG 14 V_RREB1_01_M00257 TRANSFAC + 67770971 67770984 1.0E-06 CCCCAACCCCACCC 14 V_SMAD4_Q6_M00733 TRANSFAC - 67769994 67770008 5.0E-06 GTGGTTCAGCCTCCC 15 V_HOXA11_01_M01378 TRANSFAC - 67769798 67769813 2.0E-06 TGAAATCATAAAAAAG 16 V_HIC1_02_M01072 TRANSFAC + 67771321 67771335 1.0E-06 CCCCGGTGCCCGCCG 15 V_CTCF_01_M01200 TRANSFAC - 67771736 67771755 7.0E-06 AGGGCCAGGAGGTGGCTGAG 20 V_ISGF4G_04_M02875 TRANSFAC + 67771814 67771827 4.0E-06 GTAAAACAGAAATA 14 V_ICSBP_Q6_M00699 TRANSFAC - 67771060 67771071 4.0E-06 AAACAGAAACCG 12 V_HOXD9_Q2_M01834 TRANSFAC - 67769801 67769810 2.0E-06 AATCATAAAA 10 V_SP4_Q5_M01273 TRANSFAC + 67771597 67771607 7.0E-06 CCCCCGCCCCG 11 V_USF_Q6_01_M00796 TRANSFAC + 67776025 67776036 2.0E-06 AGCCACGTGACT 12 V_ZIC2_05_M02940 TRANSFAC - 67776015 67776029 8.0E-06 TGGCTCAGCATGTGA 15 V_MTF1_06_M02882 TRANSFAC - 67769798 67769811 2.0E-06 AAATCATAAAAAAG 14 V_FAC1_01_M00456 TRANSFAC + 67769610 67769623 5.0E-06 AAAAAAAAAAAGTA 14 V_AREB6_02_M00413 TRANSFAC - 67776396 67776407 7.0E-06 ATACACCTGTCA 12 V_MAX_04_M02881 TRANSFAC + 67776024 67776037 4.0E-06 GAGCCACGTGACTG 14 V_TCFAP2B_03_M02820 TRANSFAC + 67770289 67770302 3.0E-06 GTGCCCTGAGGCAA 14 V_TCFAP2B_03_M02820 TRANSFAC - 67770289 67770302 1.0E-06 TTGCCTCAGGGCAC 14 V_FPM315_01_M01587 TRANSFAC - 67771219 67771230 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC - 67771222 67771233 7.0E-06 CGAGGAGGAGGA 12 V_IRF1_Q6_01_M01881 TRANSFAC + 67771060 67771073 3.0E-06 CGGTTTCTGTTTCC 14 V_SRF_06_M02916 TRANSFAC + 67769604 67769620 2.0E-06 GTCTCAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 67769605 67769621 2.0E-06 TCTCAAAAAAAAAAAAG 17 V_SRF_06_M02916 TRANSFAC + 67769606 67769622 0.0E+00 CTCAAAAAAAAAAAAGT 17 V_SRF_06_M02916 TRANSFAC + 67769607 67769623 0.0E+00 TCAAAAAAAAAAAAGTA 17 V_SRF_06_M02916 TRANSFAC + 67769608 67769624 0.0E+00 CAAAAAAAAAAAAGTAA 17 V_SRF_06_M02916 TRANSFAC + 67770358 67770374 9.0E-06 GGGTAGAAAAAAACCTC 17 V_SRF_06_M02916 TRANSFAC + 67770359 67770375 1.0E-06 GGTAGAAAAAAACCTCT 17 V_VDR_Q3_M00444 TRANSFAC - 67770333 67770347 0.0E+00 GAGTGAAGGGGGTGA 15 V_VDR_Q3_M00444 TRANSFAC + 67776554 67776568 1.0E-05 GAGGCAGAGGGGACA 15 V_EKLF_Q5_M01874 TRANSFAC + 67776350 67776359 9.0E-06 CCACACCCAC 10 V_HOXC10_01_M01361 TRANSFAC - 67769798 67769813 5.0E-06 TGAAATCATAAAAAAG 16 V_AP2ALPHA_02_M01045 TRANSFAC - 67770289 67770303 9.0E-06 TTTGCCTCAGGGCAC 15 V_UF1H3BETA_Q6_M01068 TRANSFAC - 67770976 67770989 4.0E-06 GGCGGGGGTGGGGT 14 V_SOX5_04_M02910 TRANSFAC - 67769796 67769810 8.0E-06 AATCATAAAAAAGAA 15 V_RNF96_01_M01199 TRANSFAC + 67770813 67770822 7.0E-06 GCCCGCGGCC 10 V_BRF1_01_M01747 TRANSFAC + 67771721 67771733 0.0E+00 GAGTTCGAATCCC 13 V_TCF3_05_M02920 TRANSFAC + 67769605 67769619 4.0E-06 TCTCAAAAAAAAAAA 15 V_PAX4_04_M00380 TRANSFAC + 67769616 67769645 4.0E-06 AAAAAGTAAGCAAGCAAAAGCAAACATAGC 30

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.