Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ST8SIA2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 8128 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 chr15 + 92932139 - 92937639 92937139 Transcription Factor Binding Sites   Download all TFBS in the ST8SIA2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR + 92935044 92935062 1.0E-06 GAGCCACTAGAGGGCAGGA 19 CTCF_MA0139.1 JASPAR + 92937524 92937542 9.0E-06 TTGGCAGAAGGTGGCGGCG 19 VSX2_homeodomain_DBD_monomeric_8_1 SELEX - 92935004 92935011 5.0E-06 CTAATTAT 8 NHLH1_MA0048.1 JASPAR - 92937190 92937201 8.0E-06 GCGCAGCTGGGC 12 TBX5_TBX_DBD_dimeric_20_1 SELEX + 92935953 92935972 8.0E-06 GGGTGTGGTTTCCAGCACTT 20 TBX5_TBX_DBD_dimeric_20_1 SELEX - 92935953 92935972 6.0E-06 AAGTGCTGGAAACCACACCC 20 HINFP1_C2H2_full_dimeric_20_1 SELEX + 92937209 92937228 0.0E+00 GCGGAGGCTCCGGCGTCCGC 20 HINFP1_C2H2_full_dimeric_20_1 SELEX - 92937209 92937228 0.0E+00 GCGGACGCCGGAGCCTCCGC 20 EWSR1-FLI1_MA0149.1 JASPAR + 92937050 92937067 6.0E-06 GGAGAGGAGGGAGGGAGG 18 EWSR1-FLI1_MA0149.1 JASPAR + 92937051 92937068 6.0E-06 GAGAGGAGGGAGGGAGGG 18 ERG_ETS_full_dimeric_14_1 SELEX - 92938227 92938240 6.0E-06 CCAGGAAGTCCGGA 14 ZNF238_C2H2_full_monomeric_13_1 SELEX - 92936657 92936669 4.0E-06 CAGGCAGATGTTT 13 MEOX2_homeodomain_DBD_dimeric_14_1 SELEX + 92934998 92935011 2.0E-06 CCTATCATAATTAG 14 SP1_MA0079.2 JASPAR - 92937843 92937852 3.0E-06 CCCCTCCCCC 10 TBX4_TBX_DBD_dimeric_20_1 SELEX + 92935953 92935972 4.0E-06 GGGTGTGGTTTCCAGCACTT 20 TBX4_TBX_DBD_dimeric_20_1 SELEX - 92935953 92935972 6.0E-06 AAGTGCTGGAAACCACACCC 20 TFCP2_CP2_full_dimer-of-dimers_16_1 SELEX - 92939558 92939573 3.0E-06 TCTGGATTAAACATGT 16 ZSCAN4_C2H2_full_monomeric_15_1 SELEX + 92937914 92937928 2.0E-06 TGCACACACAGACAG 15 TEAD3_TEA_DBD_monomeric_8_1 SELEX + 92935976 92935983 1.0E-05 ACATTCCA 8 PITX1_homeodomain_full_monomeric_9_1 SELEX + 92939563 92939571 5.0E-06 TTTAATCCA 9 TEAD4_TEA_DBD_monomeric_10_1 SELEX + 92935975 92935984 8.0E-06 GACATTCCAT 10 FLI1_ETS_full_monomeric_14_1 SELEX - 92938227 92938240 7.0E-06 CCAGGAAGTCCGGA 14 V_MINI20_B_M00324 TRANSFAC + 92937285 92937305 2.0E-06 CGAACCCACCATGCAGCTGCA 21 V_MEIS1BHOXA9_02_M00421 TRANSFAC - 92937001 92937014 8.0E-06 TGACAGCTTTGCTC 14 V_ZFP187_03_M02830 TRANSFAC - 92935566 92935579 4.0E-06 GCGTGTACTAATTC 14 V_HSF1_Q6_M01023 TRANSFAC - 92938098 92938114 1.0E-06 TTTCCCGAAATGTCTCC 17 V_TCFE2A_04_M02927 TRANSFAC - 92936654 92936670 7.0E-06 CCAGGCAGATGTTTCAG 17 V_ATF5_01_M01295 TRANSFAC - 92937046 92937056 7.0E-06 CCTCTCCCTTC 11 V_SOX40_04_M02908 TRANSFAC - 92934997 92935012 6.0E-06 TCTAATTATGATAGGG 16 V_RP58_01_M00532 TRANSFAC + 92936656 92936667 8.0E-06 GAAACATCTGCC 12 V_AP2_Q6_01_M00915 TRANSFAC - 92936791 92936803 9.0E-06 CACCCCTCAGGCT 13 V_SP1_03_M02281 TRANSFAC - 92937843 92937852 3.0E-06 CCCCTCCCCC 10 V_GM497_04_M02864 TRANSFAC + 92937925 92937940 9.0E-06 ACAGGCACACGCGCCT 16 V_TGIF_02_M01346 TRANSFAC - 92937003 92937019 3.0E-06 CAGTTTGACAGCTTTGC 17 V_ZBP89_Q4_M01816 TRANSFAC - 92937842 92937851 4.0E-06 CCCTCCCCCA 10 V_NFKB_Q6_M00194 TRANSFAC - 92937901 92937914 7.0E-06 AGGGGACATTCCGC 14 V_MAZ_Q6_01_M02023 TRANSFAC + 92937056 92937069 2.0E-06 GAGGGAGGGAGGGG 14 V_SOX12_04_M02900 TRANSFAC - 92937769 92937784 6.0E-06 CTGGAGACAAAGAAAC 16 V_ZBRK1_01_M01105 TRANSFAC + 92937758 92937772 2.0E-06 GGGAGGCAGGAGTTT 15 V_BRACH_01_M00150 TRANSFAC - 92935006 92935029 2.0E-06 AGACAGACATTCAGGTGTCTAATT 24 V_TGIF1_01_M03111 TRANSFAC - 92937003 92937019 3.0E-06 CAGTTTGACAGCTTTGC 17 V_CTCF_02_M01259 TRANSFAC + 92935041 92935060 0.0E+00 AGTGAGCCACTAGAGGGCAG 20 V_CTCF_02_M01259 TRANSFAC + 92937521 92937540 8.0E-06 GGTTTGGCAGAAGGTGGCGG 20 V_CTCF_01_M01200 TRANSFAC + 92937523 92937542 6.0E-06 TTTGGCAGAAGGTGGCGGCG 20 V_SP4_Q5_M01273 TRANSFAC - 92937036 92937046 7.0E-06 CCCCCGCCCCG 11 V_MINI19_B_M00323 TRANSFAC + 92937285 92937305 1.0E-06 CGAACCCACCATGCAGCTGCA 21 V_TAL1_01_M01591 TRANSFAC + 92937348 92937360 4.0E-06 CTTCCTCATCTTC 13 V_NRSF_01_M00256 TRANSFAC + 92935093 92935113 7.0E-06 TCTAGCTCCTAGCACAGAGCC 21 V_ZFP281_01_M01597 TRANSFAC + 92937842 92937852 1.0E-06 TGGGGGAGGGG 11 V_EWSR1FLI1_01_M02252 TRANSFAC + 92937050 92937067 6.0E-06 GGAGAGGAGGGAGGGAGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 92937051 92937068 6.0E-06 GAGAGGAGGGAGGGAGGG 18 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC + 92935956 92935963 1.0E-05 TGTGGTTT 8 V_SMAD3_Q6_M00701 TRANSFAC + 92935021 92935029 3.0E-06 TGTCTGTCT 9 V_UF1H3BETA_Q6_M01068 TRANSFAC + 92937039 92937052 0.0E+00 GGCGGGGGAAGGGA 14 V_SOX5_04_M02910 TRANSFAC + 92935000 92935014 8.0E-06 TATCATAATTAGACA 15 V_HOXA4_Q2_M00640 TRANSFAC + 92935004 92935011 5.0E-06 ATAATTAG 8

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.