Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

PABPN1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
8106 poly(A) binding protein, nuclear 1 chr14 +23784396 - 23789896 23789396

Transcription Factor Binding Sites

 
Download all TFBS in the PABPN1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
CTCF_MA0139.1 JASPAR - 23790748 23790766 7.0E-06 CGGGCACAAGATGGCGCCG 19
HOXD12_homeodomain_DBD_monomeric_9_1 SELEX - 23791256 23791264 6.0E-06 GTGATAAAA 9
Rxrb_nuclearreceptor_DBD_dimeric_14_1 SELEX + 23790226 23790239 6.0E-06 GGGGGCAAGGTTCA 14
IRF7_IRF_DBD_dimeric_14_1 SELEX + 23789842 23789855 8.0E-06 AGGAAAAAGAAAAT 14
En1_MA0027.1 JASPAR + 23790557 23790567 8.0E-06 AAGTAATATTC 11
NR2F1_nuclearreceptor_DBD_monomeric_13_1 SELEX - 23791655 23791667 2.0E-06 CAAAGGTCAGAGG 13
GCM1_GCM_full_dimeric_16_1 SELEX + 23789966 23789981 6.0E-06 ATGATGGTGCCAATAA 16
GCM1_GCM_full_dimeric_16_1 SELEX - 23789966 23789981 7.0E-06 TTATTGGCACCATCAT 16
NR2F1_MA0017.1 JASPAR - 23790226 23790239 2.0E-06 TGAACCTTGCCCCC 14
TFEB_bHLH_full_dimeric_10_1 SELEX - 23790179 23790188 8.0E-06 GTCACATGAC 10
CTCF_C2H2_full_monomeric_17_1 SELEX + 23790749 23790765 8.0E-06 GGCGCCATCTTGTGCCC 17
NR2C2_nuclearreceptor_DBD_dimeric_14_1 SELEX + 23790226 23790239 7.0E-06 GGGGGCAAGGTTCA 14
SP1_C2H2_DBD_monomeric_11_1 SELEX - 23791117 23791127 7.0E-06 ACCCCACCCCC 11
YY2_C2H2_full_monomeric_11_1 SELEX + 23790027 23790037 9.0E-06 ACCTCCATTTT 11
YY2_C2H2_full_monomeric_11_1 SELEX - 23790152 23790162 4.0E-06 GCCGCCATCTT 11
MZF1_5-13_MA0057.1 JASPAR - 23790488 23790497 1.0E-05 GTAGGGGAAA 10
HESX1_homeodomain_DBD_dimeric_15_1 SELEX - 23790548 23790562 8.0E-06 TTACTTGGCAATCAA 15
Myf_MA0055.1 JASPAR + 23790698 23790709 8.0E-06 CGGCAGCAGCAG 12
HNF4A_MA0114.1 JASPAR + 23790227 23790239 8.0E-06 GGGGCAAGGTTCA 13
HNF4A_nuclearreceptor_full_dimeric_14_1 SELEX + 23790226 23790239 3.0E-06 GGGGGCAAGGTTCA 14
IRF3_IRF_full_trimeric_21_1 SELEX + 23789842 23789862 5.0E-06 AGGAAAAAGAAAATGGAACTG 21
EMX1_homeodomain_DBD_dimeric_14_1 SELEX + 23790435 23790448 9.0E-06 TTATTACCTAAGGA 14
Sox2_MA0143.1 JASPAR + 23791662 23791676 6.0E-06 CCTTTGTGAGGCAGA 15
RXRA_nuclearreceptor_full_dimeric_14_1 SELEX + 23790226 23790239 8.0E-06 GGGGGCAAGGTTCA 14
NFIA_NFI_full_monomeric_10_1 SELEX + 23790551 23790560 5.0E-06 ATTGCCAAGT 10
V_ELF5_03_M02057 TRANSFAC + 23789840 23789849 8.0E-06 CCAGGAAAAA 10
V_SMAD3_Q6_01_M01888 TRANSFAC + 23789891 23789903 7.0E-06 GGACAGACAGGAC 13
V_YY1_02_M00069 TRANSFAC - 23790145 23790164 9.0E-06 GGGCCGCCATCTTGATACTA 20
V_XPF1_Q6_M00684 TRANSFAC + 23790832 23790841 3.0E-06 TCTGAGGAAC 10
V_XPF1_Q6_M00684 TRANSFAC - 23791652 23791661 3.0E-06 TCAGAGGAAC 10
V_NRSF_Q4_M01028 TRANSFAC - 23790703 23790721 2.0E-06 CCGCAGCCCCCGCTGCTGC 19
V_ZEC_01_M01081 TRANSFAC - 23790024 23790036 1.0E-05 AAATGGAGGTTGT 13
V_NR2F2_03_M02783 TRANSFAC - 23791655 23791670 9.0E-06 TCACAAAGGTCAGAGG 16
V_IRF_Q6_01_M00972 TRANSFAC + 23789844 23789854 7.0E-06 GAAAAAGAAAA 11
V_IRF2_Q6_M01882 TRANSFAC + 23789842 23789857 7.0E-06 AGGAAAAAGAAAATGG 16
V_NFAT3_Q3_M01734 TRANSFAC - 23789842 23789851 6.0E-06 TCTTTTTCCT 10
V_HNF4ALPHA_Q6_M00638 TRANSFAC - 23790228 23790240 2.0E-06 GTGAACCTTGCCC 13
V_YY1_Q6_M00793 TRANSFAC - 23790151 23790159 7.0E-06 GCCATCTTG 9
V_YY1_Q6_M00793 TRANSFAC + 23790752 23790760 7.0E-06 GCCATCTTG 9
V_HNF4A_03_M02220 TRANSFAC + 23790227 23790239 8.0E-06 GGGGCAAGGTTCA 13
V_SPZ1_01_M00446 TRANSFAC - 23791365 23791379 7.0E-06 TGGGGAGGGTATGGA 15
V_TR4_Q2_M01725 TRANSFAC + 23791657 23791667 2.0E-06 TCTGACCTTTG 11
V_PPAR_DR1_Q2_M00763 TRANSFAC - 23790227 23790239 6.0E-06 TGAACCTTGCCCC 13
V_EVX1_01_M01475 TRANSFAC - 23790605 23790621 4.0E-06 AGGACTCATTAGTCAAG 17
V_EVX1_01_M01475 TRANSFAC + 23790606 23790622 8.0E-06 TTGACTAATGAGTCCTC 17
V_TGIF2_01_M01407 TRANSFAC - 23790473 23790488 1.0E-05 ATCTGCCTGTCAATCA 16
V_MYF_01_M01302 TRANSFAC + 23790698 23790709 8.0E-06 CGGCAGCAGCAG 12
V_TBX18_01_M01262 TRANSFAC + 23789819 23789837 3.0E-06 AGGGGTGACATTGGAAGCT 19
V_GFI1_01_M00250 TRANSFAC - 23789741 23789764 0.0E+00 AAACCGTAAATCACGGCCTTCGAT 24
V_COUP_01_M00158 TRANSFAC - 23790226 23790239 2.0E-06 TGAACCTTGCCCCC 14
V_IRF_Q6_M00772 TRANSFAC - 23789844 23789858 0.0E+00 TCCATTTTCTTTTTC 15
V_ISRE_01_M00258 TRANSFAC - 23789842 23789856 9.0E-06 CATTTTCTTTTTCCT 15
V_SFPI1_04_M02896 TRANSFAC - 23790080 23790093 7.0E-06 CAGTTTCAGGAAAC 14
V_YY1_Q6_02_M01035 TRANSFAC + 23790027 23790037 2.0E-06 ACCTCCATTTT 11
V_YY1_Q6_02_M01035 TRANSFAC - 23790152 23790162 7.0E-06 GCCGCCATCTT 11
V_REX1_03_M01744 TRANSFAC + 23790152 23790163 0.0E+00 AAGATGGCGGCC 12
V_PBX1_05_M01967 TRANSFAC + 23790471 23790484 0.0E+00 GTTGATTGACAGGC 14
V_HNF4A_Q6_01_M02016 TRANSFAC + 23790228 23790242 7.0E-06 GGGCAAGGTTCACCT 15
V_HNF4_DR1_Q3_M00764 TRANSFAC - 23790227 23790239 2.0E-06 TGAACCTTGCCCC 13
V_SP3_Q3_M00665 TRANSFAC - 23791371 23791384 5.0E-06 ATAAGTGGGGAGGG 14
V_CTCF_02_M01259 TRANSFAC - 23790750 23790769 5.0E-06 CCCCGGGCACAAGATGGCGC 20
V_NR1B1_Q6_M02110 TRANSFAC - 23791657 23791666 2.0E-06 AAAGGTCAGA 10
V_CTCF_01_M01200 TRANSFAC - 23790748 23790767 5.0E-06 CCGGGCACAAGATGGCGCCG 20
V_GATA4_Q3_M00632 TRANSFAC - 23789935 23789946 2.0E-06 AGAAAGCAGGGA 12
V_YY1_03_M02044 TRANSFAC - 23790151 23790162 1.0E-06 GCCGCCATCTTG 12
V_YY1_03_M02044 TRANSFAC + 23790749 23790760 3.0E-06 GGCGCCATCTTG 12
V_GFI1_Q6_M01067 TRANSFAC - 23789747 23789759 9.0E-06 GTAAATCACGGCC 13
V_MRG2_01_M01395 TRANSFAC - 23790473 23790488 4.0E-06 ATCTGCCTGTCAATCA 16
V_PKNOX2_01_M01411 TRANSFAC - 23790473 23790488 5.0E-06 ATCTGCCTGTCAATCA 16
V_TFEB_01_M01768 TRANSFAC + 23790179 23790188 8.0E-06 GTCATGTGAC 10
V_TFEB_01_M01768 TRANSFAC - 23790179 23790188 8.0E-06 GTCACATGAC 10
V_DR1_Q3_M00762 TRANSFAC + 23790227 23790239 4.0E-06 GGGGCAAGGTTCA 13
V_HNF4_Q6_01_M01031 TRANSFAC + 23790227 23790240 3.0E-06 GGGGCAAGGTTCAC 14
V_MEIS1_01_M00419 TRANSFAC - 23790238 23790249 9.0E-06 TCGTGACAGGTG 12
V_FPM315_01_M01587 TRANSFAC + 23790969 23790980 3.0E-06 GGAGGAGGAGGA 12
V_P53_01_M00034 TRANSFAC + 23791284 23791303 6.0E-06 GGAAATGGCCGAGCATGGCT 20
V_P53_01_M00034 TRANSFAC - 23791284 23791303 8.0E-06 AGCCATGCTCGGCCATTTCC 20
V_T3RBETA_Q6_01_M02119 TRANSFAC - 23790184 23790200 6.0E-06 GGGAAACCCGAGGTCAC 17
V_ZFP281_01_M01597 TRANSFAC + 23791116 23791126 4.0E-06 GGGGGGTGGGG 11
V_IRF1_Q6_01_M01881 TRANSFAC - 23789843 23789856 2.0E-06 CATTTTCTTTTTCC 14
V_SOX2_01_M02246 TRANSFAC + 23791662 23791676 6.0E-06 CCTTTGTGAGGCAGA 15
V_NUR77_Q5_M01217 TRANSFAC + 23791658 23791667 7.0E-06 CTGACCTTTG 10
V_EFC_Q6_M00626 TRANSFAC - 23791221 23791234 1.0E-06 CAACACTAGGCAAC 14
V_HOXB3_01_M01330 TRANSFAC - 23790605 23790621 9.0E-06 AGGACTCATTAGTCAAG 17
V_TFE_Q6_M01029 TRANSFAC + 23790180 23790187 1.0E-05 TCATGTGA 8
V_HNF4_01_M00134 TRANSFAC + 23790224 23790242 5.0E-06 TCGGGGGCAAGGTTCACCT 19
V_ZID_01_M00085 TRANSFAC - 23789965 23789977 8.0E-06 TGGCACCATCATC 13
V_RNF96_01_M01199 TRANSFAC - 23790714 23790723 7.0E-06 GCCCGCAGCC 10
V_COUP_DR1_Q6_M00765 TRANSFAC - 23790227 23790239 5.0E-06 TGAACCTTGCCCC 13
V_PPARG_01_M00512 TRANSFAC + 23790223 23790243 8.0E-06 TTCGGGGGCAAGGTTCACCTG 21
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL