Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

ARHGAP39


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
80728 Rho GTPase activating protein 39 chr8 -145838388 - 145843888 145838888

Transcription Factor Binding Sites

 
Download all TFBS in the ARHGAP39 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
SRY_HMG_DBD_dimeric_15_1 SELEX + 145838926 145838940 8.0E-06 CGCACTTGCATTGTT 15
SOX2_HMG_full_dimeric_17_1 SELEX + 145838925 145838941 3.0E-06 TCGCACTTGCATTGTTT 17
Sox17_HMG_DBD_dimeric_15_1 SELEX + 145838926 145838940 4.0E-06 CGCACTTGCATTGTT 15
SOX18_HMG_full_dimeric_15_1 SELEX + 145838926 145838940 3.0E-06 CGCACTTGCATTGTT 15
SOX15_HMG_full_dimeric_15_1 SELEX + 145838926 145838940 3.0E-06 CGCACTTGCATTGTT 15
SOX14_HMG_DBD_dimeric_12_1 SELEX + 145838927 145838938 9.0E-06 GCACTTGCATTG 12
Sox3_HMG_DBD_dimeric_17_1 SELEX - 145838925 145838941 5.0E-06 AAACAATGCAAGTGCGA 17
Sox1_HMG_DBD_dimeric_15_1 SELEX + 145838926 145838940 2.0E-06 CGCACTTGCATTGTT 15
V_SOX30_03_M02804 TRANSFAC - 145838929 145838944 1.0E-05 GAGAAACAATGCAAGT 16
V_HMX1_01_M00433 TRANSFAC - 145838924 145838933 8.0E-06 CAAGTGCGAA 10
V_NANOG_02_M01247 TRANSFAC - 145838964 145838983 9.0E-06 ATGAAGGAACAAAGACACAG 20
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL