Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ESX1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS Motifs 80712 ESX homeobox 1 chrX - 103499099 - 103504599 103499599 ESX1_homeodomain_full_monomeric_10_1 V_ESX1_01_M01474 Transcription Factor Binding Sites   Download all TFBS in the ESX1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints MYBL2_MYB_DBD_dimeric_15_1 SELEX + 103499737 103499751 8.0E-06 GTCGGTTAAACGCCC 15 MYBL2_MYB_DBD_dimeric_15_1 SELEX - 103499737 103499751 6.0E-06 GGGCGTTTAACCGAC 15 MAFF_bZIP_DBD_dimeric_15_1 SELEX + 103502543 103502557 2.0E-06 CTGCTGAGTCTGCAG 15 MAFF_bZIP_DBD_dimeric_15_1 SELEX - 103502543 103502557 2.0E-06 CTGCAGACTCAGCAG 15 Mafb_bZIP_DBD_dimeric_17_1 SELEX + 103502542 103502558 4.0E-06 CCTGCTGAGTCTGCAGG 17 Mafb_bZIP_DBD_dimeric_17_1 SELEX - 103502542 103502558 5.0E-06 CCTGCAGACTCAGCAGG 17 MAFK_bZIP_full_dimeric_15_1 SELEX + 103502543 103502557 2.0E-06 CTGCTGAGTCTGCAG 15 MAFK_bZIP_full_dimeric_15_1 SELEX - 103502543 103502557 2.0E-06 CTGCAGACTCAGCAG 15 Pou5f1_MA0142.1 JASPAR + 103496280 103496294 1.0E-06 TATTTTTTTGCAAAT 15 Pou5f1_MA0142.1 JASPAR + 103502459 103502473 5.0E-06 TATTCACTTGCAAAA 15 ELF5_MA0136.1 JASPAR + 103496294 103496302 4.0E-06 TACTTCCTT 9 Sox2_MA0143.1 JASPAR + 103502500 103502514 8.0E-06 CCTTTCTGATTTTAA 15 RARG_nuclearreceptor_full_dimeric_16_1 SELEX + 103498427 103498442 6.0E-06 AAGCTCAAAAGTCCGC 16 V_FOXP1_01_M00987 TRANSFAC + 103496275 103496294 6.0E-06 TTATTTATTTTTTTGCAAAT 20 V_POU5F1_02_M02245 TRANSFAC + 103496280 103496294 1.0E-06 TATTTTTTTGCAAAT 15 V_POU5F1_02_M02245 TRANSFAC + 103502459 103502473 5.0E-06 TATTCACTTGCAAAA 15 V_IK_Q5_M01169 TRANSFAC - 103502324 103502333 3.0E-06 TTTGGGAGGC 10 V_MAFB_03_M02879 TRANSFAC - 103496281 103496295 0.0E+00 TATTTGCAAAAAAAT 15 V_MAFB_03_M02879 TRANSFAC + 103502463 103502477 1.0E-06 CACTTGCAAAAAGAT 15 V_POU1F1_Q6_M00744 TRANSFAC + 103502437 103502446 4.0E-06 ATGAATAAGT 10 V_SP100_04_M02913 TRANSFAC + 103499734 103499748 2.0E-06 CGCGTCGGTTAAACG 15 V_LYF1_01_M00141 TRANSFAC - 103502325 103502333 9.0E-06 TTTGGGAGG 9 V_SP4_03_M02810 TRANSFAC + 103499742 103499758 6.0E-06 TTAAACGCCCCCTATTA 17 V_HNF1_Q6_01_M01011 TRANSFAC - 103496274 103496294 9.0E-06 ATTTGCAAAAAAATAAATAAA 21 V_ELF5_01_M01197 TRANSFAC - 103496294 103496304 6.0E-06 TCAAGGAAGTA 11 V_OCT1_04_M00138 TRANSFAC + 103496279 103496301 2.0E-06 TTATTTTTTTGCAAATACTTCCT 23 V_CTCF_02_M01259 TRANSFAC - 103498439 103498458 4.0E-06 CTTTTACAACCAGGGGGCGG 20 V_OCT4_02_M01124 TRANSFAC + 103496281 103496295 3.0E-06 ATTTTTTTGCAAATA 15 V_OCT4_02_M01124 TRANSFAC + 103502460 103502474 0.0E+00 ATTCACTTGCAAAAA 15 V_CTCF_01_M01200 TRANSFAC - 103498437 103498456 7.0E-06 TTTACAACCAGGGGGCGGAC 20 V_TAL1_01_M01591 TRANSFAC + 103502559 103502571 6.0E-06 CCTTCTTCTCTTT 13 V_CEBPA_01_M00116 TRANSFAC - 103496282 103496295 8.0E-06 TATTTGCAAAAAAA 14 V_ZBTB4_04_M02929 TRANSFAC + 103502459 103502474 8.0E-06 TATTCACTTGCAAAAA 16 V_MTATA_B_M00320 TRANSFAC + 103499686 103499702 8.0E-06 CCCTATATAGCGGTACG 17 V_PITX2_Q2_M00482 TRANSFAC - 103502337 103502347 1.0E-06 TGTAATCCCAG 11 V_SOX2_01_M02246 TRANSFAC + 103502500 103502514 8.0E-06 CCTTTCTGATTTTAA 15 V_VMAF_01_M00035 TRANSFAC - 103502541 103502559 1.0E-05 GCCTGCAGACTCAGCAGGA 19 V_SATB1_01_M01232 TRANSFAC - 103496284 103496295 8.0E-06 TATTTGCAAAAA 12 V_ELF5_04_M02241 TRANSFAC + 103496294 103496302 4.0E-06 TACTTCCTT 9 V_CEBPA_Q6_M01866 TRANSFAC + 103496282 103496294 3.0E-06 TTTTTTTGCAAAT 13 V_NANOG_02_M01247 TRANSFAC - 103502495 103502514 7.0E-06 TTAAAATCAGAAAGGCTGTG 20 V_OCT4_01_M01125 TRANSFAC + 103496280 103496294 0.0E+00 TATTTTTTTGCAAAT 15 V_OCT4_01_M01125 TRANSFAC + 103502459 103502473 2.0E-06 TATTCACTTGCAAAA 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.