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ZKSCAN3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS Motifs 80317 zinc finger with KRAB and SCAN domains 3 chr6 + 28312690 - 28318190 28317690 ZNF306_C2H2_full_monomeric_14_1 Transcription Factor Binding Sites   Download all TFBS in the ZKSCAN3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU4F2_POU_full_monomeric_16_1 SELEX - 28315109 28315124 3.0E-06 GTGCATATCTAAGGAA 16 GABPA_MA0062.2 JASPAR + 28317686 28317696 0.0E+00 CCGGAAGTGGC 11 POU2F1_POU_DBD_dimeric_14_1 SELEX + 28317587 28317600 6.0E-06 AATAAAAATTTAAA 14 Tp53_p53l_DBD_dimeric_18_1 SELEX + 28322059 28322076 0.0E+00 ACAGGTTATATAACAAGT 18 NFIA_NFI_full_dimeric_15_1 SELEX + 28318996 28319010 5.0E-06 TTGGCTCAGATCCAA 15 NFIA_NFI_full_dimeric_15_1 SELEX - 28318996 28319010 5.0E-06 TTGGATCTGAGCCAA 15 POU3F3_POU_DBD_monomeric_12_1 SELEX - 28318183 28318194 6.0E-06 CAGAATAATTTA 12 POU3F2_POU_DBD_monomeric_13_1 SELEX - 28318183 28318195 9.0E-06 ACAGAATAATTTA 13 TEF_bZIP_DBD_dimeric_12_1 SELEX + 28322062 28322073 5.0E-06 GGTTATATAACA 12 TEF_bZIP_DBD_dimeric_12_1 SELEX - 28322062 28322073 5.0E-06 TGTTATATAACC 12 POU3F4_POU_DBD_monomeric_11_1 SELEX - 28318183 28318193 4.0E-06 AGAATAATTTA 11 GRHL1_CP2_full_dimeric_12_1 SELEX + 28322056 28322067 6.0E-06 CAAACAGGTTAT 12 GRHL1_CP2_full_dimeric_12_1 SELEX - 28322056 28322067 9.0E-06 ATAACCTGTTTG 12 TBX19_TBX_DBD_dimeric_20_1 SELEX - 28322288 28322307 8.0E-06 TGTCAGACTTATGTGTCAAG 20 HLF_bZIP_full_dimeric_12_1 SELEX + 28322062 28322073 7.0E-06 GGTTATATAACA 12 HLF_bZIP_full_dimeric_12_1 SELEX - 28322062 28322073 3.0E-06 TGTTATATAACC 12 NFIX_NFI_full_dimeric_15_2 SELEX + 28318996 28319010 7.0E-06 TTGGCTCAGATCCAA 15 NFIX_NFI_full_dimeric_15_2 SELEX - 28318996 28319010 9.0E-06 TTGGATCTGAGCCAA 15 NFIL3_MA0025.1 JASPAR - 28322061 28322071 8.0E-06 TTATATAACCT 11 NFIL3_MA0025.1 JASPAR + 28322064 28322074 8.0E-06 TTATATAACAA 11 DBP_bZIP_full_dimeric_12_1 SELEX + 28322062 28322073 5.0E-06 GGTTATATAACA 12 DBP_bZIP_full_dimeric_12_1 SELEX - 28322062 28322073 7.0E-06 TGTTATATAACC 12 Pax4_MA0068.1 JASPAR - 28318163 28318192 1.0E-05 GAATAATTTAAAGACCTTGAAACTGACCTT 30 Spz1_MA0111.1 JASPAR - 28315038 28315048 3.0E-06 AGGGTATCAGA 11 Foxq1_MA0040.1 JASPAR - 28322252 28322262 8.0E-06 CAAAGTTTATA 11 POU2F3_POU_DBD_dimeric_12_1 SELEX + 28317588 28317599 7.0E-06 ATAAAAATTTAA 12 NRL_bZIP_DBD_monomeric_11_1 SELEX - 28321947 28321957 2.0E-06 AAACTGCTGAC 11 POU3F1_POU_DBD_monomeric_12_2 SELEX - 28318183 28318194 7.0E-06 CAGAATAATTTA 12 Hltf_MA0109.1 JASPAR + 28315029 28315038 1.0E-05 AACCTTATCT 10 NFIB_NFI_full_dimeric_15_1 SELEX + 28318996 28319010 4.0E-06 TTGGCTCAGATCCAA 15 NFIB_NFI_full_dimeric_15_1 SELEX - 28318996 28319010 5.0E-06 TTGGATCTGAGCCAA 15 ETS1_ETS_full_dimeric_18_1 SELEX + 28315098 28315115 8.0E-06 ACCGGGAACACTTCCTTA 18 MAFK_bZIP_full_monomeric_12_1 SELEX - 28321947 28321958 2.0E-06 AAAACTGCTGAC 12 POU3F3_POU_DBD_dimeric_12_1 SELEX + 28317588 28317599 1.0E-05 ATAAAAATTTAA 12 RORA_1_MA0071.1 JASPAR + 28318160 28318169 2.0E-06 AACAAGGTCA 10 FOXL1_MA0033.1 JASPAR + 28322336 28322343 5.0E-06 TATACATA 8 FOXB1_forkhead_DBD_monomeric_11_1 SELEX - 28322333 28322343 8.0E-06 TATGTATACAT 11 NFE2L2_MA0150.1 JASPAR - 28322103 28322113 9.0E-06 GTGACTCAGCG 11 V_RUSH1A_02_M01107 TRANSFAC + 28315029 28315038 1.0E-05 AACCTTATCT 10 V_HOXA9_01_M01351 TRANSFAC + 28318175 28318191 6.0E-06 AAGGTCTTTAAATTATT 17 V_MEQ_01_M02049 TRANSFAC - 28317881 28317889 7.0E-06 AACACACAC 9 V_FOXP1_01_M00987 TRANSFAC + 28317859 28317878 4.0E-06 GTATGTGTGTGTGTGTGTGT 20 V_FOXP1_01_M00987 TRANSFAC + 28317861 28317880 5.0E-06 ATGTGTGTGTGTGTGTGTGT 20 V_FOXP1_01_M00987 TRANSFAC + 28317871 28317890 5.0E-06 GTGTGTGTGTGTGTGTGTTT 20 V_TEL1_02_M02070 TRANSFAC + 28317685 28317694 5.0E-06 CCCGGAAGTG 10 V_DBX1_01_M01483 TRANSFAC - 28317585 28317601 8.0E-06 TTTTAAATTTTTATTTT 17 V_APOLYA_B_M00310 TRANSFAC - 28317598 28317612 8.0E-06 ATTAAAGAGGCTTTT 15 V_MAFK_03_M02776 TRANSFAC - 28321945 28321959 3.0E-06 AAAAACTGCTGACCC 15 V_GATA2_02_M00348 TRANSFAC - 28315031 28315040 7.0E-06 AGAGATAAGG 10 V_SMAD3_Q6_01_M01888 TRANSFAC - 28321907 28321919 1.0E-06 AGACAGACAGAGG 13 V_NF1_Q6_01_M00806 TRANSFAC - 28318994 28319010 2.0E-06 TTGGATCTGAGCCAAAC 17 V_SIX6_02_M01398 TRANSFAC - 28315035 28315051 4.0E-06 GAGAGGGTATCAGAGAT 17 V_NF1A_Q6_M02103 TRANSFAC - 28318199 28318214 4.0E-06 CTGGCTCTTGGCCAGT 16 V_NF1A_Q6_M02103 TRANSFAC - 28318995 28319010 1.0E-06 TTGGATCTGAGCCAAA 16 V_HMGIY_Q3_M01010 TRANSFAC - 28317588 28317602 1.0E-05 CTTTTAAATTTTTAT 15 V_RORA1_01_M00156 TRANSFAC + 28318158 28318170 6.0E-06 GTAACAAGGTCAG 13 V_BCL6_01_M01183 TRANSFAC - 28317585 28317600 9.0E-06 TTTAAATTTTTATTTT 16 V_BCL6_01_M01183 TRANSFAC - 28317586 28317601 1.0E-06 TTTTAAATTTTTATTT 16 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC + 28317591 28317602 2.0E-06 AAAATTTAAAAG 12 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC - 28318180 28318191 6.0E-06 AATAATTTAAAG 12 V_MAFB_05_M02775 TRANSFAC - 28321942 28321958 9.0E-06 AAAACTGCTGACCCTGT 17 V_LRH1_Q5_01_M02098 TRANSFAC + 28318171 28318181 7.0E-06 TTTCAAGGTCT 11 V_NERF_01_M01976 TRANSFAC + 28317685 28317694 9.0E-06 CCCGGAAGTG 10 V_LMAF_Q2_M01139 TRANSFAC + 28321946 28321954 6.0E-06 GGTCAGCAG 9 V_MAFB_03_M02879 TRANSFAC - 28318140 28318154 4.0E-06 GCAGTGCAAAAATGT 15 V_ZTA_Q2_M00711 TRANSFAC + 28318991 28319003 9.0E-06 TCAGTTTGGCTCA 13 V_ZTA_Q2_M00711 TRANSFAC + 28322297 28322309 3.0E-06 TAAGTCTGACACA 13 V_YY1_Q6_M00793 TRANSFAC - 28321921 28321929 7.0E-06 GCCATCTTG 9 V_P53_DECAMER_Q2_M00761 TRANSFAC + 28318113 28318122 7.0E-06 AGACAAGCCT 10 V_GKLF_02_M01588 TRANSFAC + 28317703 28317714 8.0E-06 GCCCCGCCCTGC 12 V_DLX2_01_M01468 TRANSFAC + 28322000 28322015 5.0E-06 AGGGCAATTATACCAT 16 V_SOX21_03_M02803 TRANSFAC + 28317584 28317599 8.0E-06 AAAAATAAAAATTTAA 16 V_SOX21_03_M02803 TRANSFAC - 28317584 28317599 6.0E-06 TTAAATTTTTATTTTT 16 V_CDX_Q5_M00991 TRANSFAC + 28317583 28317600 1.0E-05 GAAAAATAAAAATTTAAA 18 V_CEBPB_01_M00109 TRANSFAC - 28318959 28318972 8.0E-06 AGATTGGGAAATTG 14 V_ELF2_02_M02054 TRANSFAC + 28317685 28317694 8.0E-06 CCCGGAAGTG 10 V_ROAZ_01_M00467 TRANSFAC + 28322264 28322277 6.0E-06 GCACCCAGGGCTGA 14 V_RFXDC2_04_M02894 TRANSFAC + 28318083 28318099 2.0E-06 GTATTTGGAGACGGGAT 17 V_BEL1_B_M00312 TRANSFAC - 28322028 28322055 9.0E-06 TGTAAGCTCATACTTGGCTTACAGCCAC 28 V_SIX1_01_M01313 TRANSFAC - 28315035 28315051 4.0E-06 GAGAGGGTATCAGAGAT 17 V_ZBP89_Q4_M01816 TRANSFAC - 28317964 28317973 4.0E-06 CCCTCCCCCA 10 V_SIX3_01_M01358 TRANSFAC - 28315035 28315051 1.0E-06 GAGAGGGTATCAGAGAT 17 V_RXRA_04_M02895 TRANSFAC - 28322250 28322265 4.0E-06 GCCCAAAGTTTATATG 16 V_MAZ_Q6_01_M02023 TRANSFAC - 28317902 28317915 0.0E+00 TGGGGAGGGAAGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC + 28317965 28317978 0.0E+00 GGGGGAGGGAAGGG 14 V_TTF1_Q6_M00794 TRANSFAC - 28318072 28318083 8.0E-06 CCCTCAAGAACC 12 V_ASCL2_03_M02737 TRANSFAC - 28321758 28321774 0.0E+00 TGCAGCAGCTGCTGCTG 17 V_ASCL2_03_M02737 TRANSFAC + 28321759 28321775 1.0E-06 AGCAGCAGCTGCTGCAG 17 V_GADP_01_M01258 TRANSFAC - 28317683 28317694 3.0E-06 CACTTCCGGGCC 12 V_OCT1_04_M00138 TRANSFAC - 28317581 28317603 6.0E-06 GCTTTTAAATTTTTATTTTTCCA 23 V_DAX1_01_M01248 TRANSFAC + 28318156 28318175 7.0E-06 TGGTAACAAGGTCAGTTTCA 20 V_ERALPHA_01_M01801 TRANSFAC + 28322417 28322431 9.0E-06 AGGTTATAGTGAGCA 15 V_RREB1_01_M00257 TRANSFAC - 28317881 28317894 4.0E-06 CCACAAACACACAC 14 V_HFH1_01_M00129 TRANSFAC - 28322251 28322262 2.0E-06 CAAAGTTTATAT 12 V_NCX_02_M01420 TRANSFAC + 28317589 28317605 5.0E-06 TAAAAATTTAAAAGCCT 17 V_MAFK_Q3_M02022 TRANSFAC - 28322102 28322112 6.0E-06 TGACTCAGCGA 11 V_TEL1_01_M01993 TRANSFAC + 28317685 28317694 5.0E-06 CCCGGAAGTG 10 V_IK3_01_M00088 TRANSFAC + 28315097 28315109 6.0E-06 TACCGGGAACACT 13 V_SIX2_01_M01433 TRANSFAC - 28315035 28315051 5.0E-06 GAGAGGGTATCAGAGAT 17 V_ELF4_01_M01979 TRANSFAC + 28317685 28317694 4.0E-06 CCCGGAAGTG 10 V_NKX23_01_M01457 TRANSFAC + 28317729 28317744 3.0E-06 TTTCAAGCACTTTGTG 16 V_MAZR_01_M00491 TRANSFAC + 28317619 28317631 3.0E-06 AGGGGAGGGGACA 13 V_HEN1_02_M00058 TRANSFAC - 28321756 28321777 1.0E-05 AGCTGCAGCAGCTGCTGCTGAA 22 V_BDP1_01_M01796 TRANSFAC - 28318235 28318246 1.0E-06 GGATTTGAACCA 12 V_ASCL2_04_M02841 TRANSFAC - 28317617 28317632 7.0E-06 GTGTCCCCTCCCCTTT 16 V_PLZF_02_M01075 TRANSFAC - 28317583 28317611 9.0E-06 TTAAAGAGGCTTTTAAATTTTTATTTTTC 29 V_ZFP281_01_M01597 TRANSFAC + 28317964 28317974 9.0E-06 TGGGGGAGGGA 11 V_R_01_M00273 TRANSFAC + 28317829 28317849 7.0E-06 TTGTCCCCGGGTAGAGGTGCG 21 V_SIX6_01_M01345 TRANSFAC - 28315035 28315051 5.0E-06 GAGAGGGTATCAGAGAT 17 V_VMAF_01_M00035 TRANSFAC - 28321938 28321956 9.0E-06 AACTGCTGACCCTGTAAGA 19 V_SMAD3_Q6_M00701 TRANSFAC + 28321785 28321793 1.0E-05 TGTCTGCCT 9 V_SMAD3_Q6_M00701 TRANSFAC + 28321911 28321919 3.0E-06 TGTCTGTCT 9 V_YY1_01_M00059 TRANSFAC - 28322432 28322448 8.0E-06 CATCACCATGTAGTGAT 17 V_NFE2_01_M00037 TRANSFAC + 28322103 28322113 2.0E-06 CGCTGAGTCAC 11 V_MOX1_01_M01443 TRANSFAC + 28322000 28322015 9.0E-06 AGGGCAATTATACCAT 16 V_BSX_01_M01442 TRANSFAC + 28322000 28322015 1.0E-05 AGGGCAATTATACCAT 16 V_ELF_02_M02053 TRANSFAC + 28317685 28317694 1.0E-05 CCCGGAAGTG 10 V_CTF1_01_M01196 TRANSFAC + 28322029 28322042 2.0E-06 TGGCTGTAAGCCAA 14 V_HOXD3_01_M01338 TRANSFAC - 28322000 28322015 7.0E-06 ATGGTATAATTGCCCT 16 V_FREAC4_01_M00292 TRANSFAC + 28322330 28322345 9.0E-06 CCAATGTATACATAGA 16 V_NFE2L2_01_M02263 TRANSFAC - 28322103 28322113 9.0E-06 GTGACTCAGCG 11 V_GATA1_02_M00126 TRANSFAC - 28315029 28315042 6.0E-06 TCAGAGATAAGGTT 14 V_GATA6_04_M02757 TRANSFAC - 28315027 28315043 6.0E-06 ATCAGAGATAAGGTTAC 17 V_HOXD10_01_M01375 TRANSFAC + 28318175 28318191 6.0E-06 AAGGTCTTTAAATTATT 17 V_TCF11MAFG_01_M00284 TRANSFAC - 28322097 28322118 2.0E-06 CCAGCGTGACTCAGCGAGTTTG 22 V_BRF1_01_M01747 TRANSFAC + 28318235 28318247 2.0E-06 TGGTTCAAATCCT 13 TLX1_NFIC_MA0119.1 JASPAR + 28322029 28322042 2.0E-06 TGGCTGTAAGCCAA 14 V_CEBPG_Q6_01_M01869 TRANSFAC - 28318960 28318971 2.0E-06 GATTGGGAAATT 12 V_NF1_Q6_M00193 TRANSFAC + 28318994 28319011 2.0E-06 GTTTGGCTCAGATCCAAG 18 V_NF1_Q6_M00193 TRANSFAC - 28322027 28322044 1.0E-05 ACTTGGCTTACAGCCACT 18

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