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ELL3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 80237 elongation factor RNA polymerase II-like 3 chr15 - 44069002 - 44074502 44069502 Transcription Factor Binding Sites   Download all TFBS in the ELL3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR - 44067800 44067818 5.0E-06 TCCCCACCAGGTGTCAGTG 19 Egr1_MA0162.1 JASPAR + 44069272 44069282 4.0E-06 CGCGTGGGCGG 11 EN2_homeodomain_full_monomeric_10_1 SELEX - 44069700 44069709 5.0E-06 CCCAATTACC 10 Tcfap2a_TFAP_DBD_dimeric_13_1 SELEX - 44068992 44069004 8.0E-06 TGCCCTGCGGGCG 13 TFAP2C_TFAP_full_dimeric_13_1 SELEX + 44068992 44069004 8.0E-06 CGCCCGCAGGGCA 13 Klf4_MA0039.2 JASPAR - 44069203 44069212 1.0E-05 AGGGTGGGGC 10 Spz1_MA0111.1 JASPAR + 44069507 44069517 1.0E-06 AGGGTTTCAGC 11 SP1_MA0079.2 JASPAR + 44068388 44068397 3.0E-06 CCCCTCCCCC 10 PRDM4_C2H2_full_monomeric_13_1 SELEX - 44068712 44068724 3.0E-06 TTCCAAGGCCACC 13 ZSCAN4_C2H2_full_monomeric_15_1 SELEX + 44069180 44069194 4.0E-06 GGCACACCCGGTAAC 15 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX - 44067810 44067820 6.0E-06 TTTCCCCACCA 11 EGR2_C2H2_DBD_monomeric_11_1 SELEX - 44069272 44069282 6.0E-06 CCGCCCACGCG 11 RUNX1_MA0002.2 JASPAR - 44068527 44068537 2.0E-06 GGCTGTGGTTT 11 V_AP2ALPHA_Q6_M01857 TRANSFAC + 44068616 44068626 1.0E-06 AGCCTCCGGCC 11 V_AP2ALPHA_Q6_M01857 TRANSFAC + 44069225 44069235 6.0E-06 CGCCCCCGGCC 11 V_XVENT1_01_M00445 TRANSFAC - 44068139 44068151 8.0E-06 CTCCTATTTTTTT 13 V_AML_Q6_M00769 TRANSFAC - 44068525 44068539 6.0E-06 GGGGCTGTGGTTTGA 15 V_FXR_Q3_M00631 TRANSFAC + 44068930 44068943 5.0E-06 TAGGGGCAGTGACT 14 V_E2F4_Q6_M02090 TRANSFAC - 44069651 44069660 3.0E-06 GCGGGAAAAA 10 V_TCFE2A_04_M02927 TRANSFAC - 44064749 44064765 7.0E-06 CAAGGCAGATGGTTCTT 17 V_NF1A_Q6_M02103 TRANSFAC + 44067776 44067791 8.0E-06 TTGGTTGCTTGCCAGT 16 V_ATF3_Q6_01_M01863 TRANSFAC + 44068378 44068388 6.0E-06 ATGAAGTCAGC 11 V_SP1_03_M02281 TRANSFAC + 44068388 44068397 3.0E-06 CCCCTCCCCC 10 V_GKLF_02_M01588 TRANSFAC + 44069203 44069214 5.0E-06 GCCCCACCCTCC 12 V_EGR1_02_M01972 TRANSFAC + 44069272 44069282 6.0E-06 CGCGTGGGCGG 11 V_HOXD13_01_M01404 TRANSFAC + 44070111 44070126 4.0E-06 CTACAAATAAAATTAC 16 V_TCFAP2E_04_M02926 TRANSFAC + 44068133 44068146 7.0E-06 TGGTGGAAAAAAAT 14 V_PPARGRXRA_01_M02262 TRANSFAC - 44069407 44069421 6.0E-06 CTGAGTGAGAGGTCA 15 V_ELF4_04_M02850 TRANSFAC + 44070110 44070126 4.0E-06 ACTACAAATAAAATTAC 17 V_GC_01_M00255 TRANSFAC - 44068385 44068398 1.0E-06 AGGGGGAGGGGCTG 14 V_RFXDC2_04_M02894 TRANSFAC - 44069468 44069484 9.0E-06 TCACTTAGAGACAGCAA 17 V_ZFP105_03_M02827 TRANSFAC + 44070112 44070126 3.0E-06 TACAAATAAAATTAC 15 V_HOXB13_01_M01467 TRANSFAC + 44070111 44070126 8.0E-06 CTACAAATAAAATTAC 16 V_RUNX1_01_M02257 TRANSFAC - 44068527 44068537 2.0E-06 GGCTGTGGTTT 11 V_KROX_Q6_M00982 TRANSFAC + 44069223 44069236 5.0E-06 CCCGCCCCCGGCCC 14 V_ZBP89_Q4_M01816 TRANSFAC + 44068184 44068193 4.0E-06 CCCTCCCCCA 10 V_SP1_Q6_M00196 TRANSFAC - 44068386 44068398 3.0E-06 AGGGGGAGGGGCT 13 V_EGR1_Q6_M01873 TRANSFAC + 44069273 44069282 7.0E-06 GCGTGGGCGG 10 V_MATH1_Q2_M01716 TRANSFAC - 44068471 44068480 9.0E-06 GCACCTGGTG 10 V_HIC1_05_M02763 TRANSFAC - 44069172 44069187 3.0E-06 GGTGTGCCAACCAAAC 16 V_REST_01_M01256 TRANSFAC - 44069628 44069649 7.0E-06 CCCAGGCGCTGTCTCGGGTGCC 22 V_IRF3_06_M02871 TRANSFAC + 44069530 44069543 7.0E-06 GGAGAAAGGGCCTG 14 V_STAT4_Q5_M02117 TRANSFAC + 44064772 44064781 1.0E-05 TTAAGGGAAA 10 V_LMO2COM_01_M00277 TRANSFAC + 44068471 44068482 6.0E-06 CACCAGGTGCAG 12 V_CTCF_02_M01259 TRANSFAC - 44067802 44067821 5.0E-06 CTTTCCCCACCAGGTGTCAG 20 V_HOXD9_Q2_M01834 TRANSFAC + 44070113 44070122 8.0E-06 ACAAATAAAA 10 V_GATA4_Q3_M00632 TRANSFAC + 44064768 44064779 2.0E-06 AGATTTAAGGGA 12 V_SP4_Q5_M01273 TRANSFAC + 44068387 44068397 5.0E-06 GCCCCTCCCCC 11 V_FXR_IR1_Q6_M00767 TRANSFAC + 44067764 44067776 5.0E-06 GAGTGACTGTCCT 13 V_TTF1_Q5_M02034 TRANSFAC + 44069498 44069511 9.0E-06 AACCCCTTGAGGGT 14 V_SMAD4_04_M02898 TRANSFAC - 44069520 44069536 8.0E-06 TTTCTCCCGCCCCTCTG 17 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC - 44069205 44069213 8.0E-06 GAGGGTGGG 9 V_T3R_Q6_M00963 TRANSFAC + 44067769 44067777 3.0E-06 ACTGTCCTT 9 V_NCX_01_M00484 TRANSFAC + 44069699 44069708 1.0E-05 AGGTAATTGG 10 V_PXR_Q2_M00964 TRANSFAC + 44064743 44064754 3.0E-06 AGGGTTAAGAAC 12 V_ZFP281_01_M01597 TRANSFAC - 44068183 44068193 9.0E-06 TGGGGGAGGGA 11 V_ZFP281_01_M01597 TRANSFAC - 44068388 44068398 3.0E-06 AGGGGGAGGGG 11 V_ZFP281_04_M02831 TRANSFAC + 44068386 44068400 5.0E-06 AGCCCCTCCCCCTCC 15 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC - 44068527 44068534 1.0E-05 TGTGGTTT 8 V_RFX3_05_M02892 TRANSFAC - 44069466 44069488 0.0E+00 GCTTTCACTTAGAGACAGCAACT 23 V_UF1H3BETA_Q6_M01068 TRANSFAC - 44068387 44068400 1.0E-06 GGAGGGGGAGGGGC 14 V_SP1_Q4_01_M00932 TRANSFAC - 44068386 44068398 2.0E-06 AGGGGGAGGGGCT 13 V_SOX5_04_M02910 TRANSFAC - 44070003 44070017 7.0E-06 AAACATAATCAAACA 15 V_DEC_Q1_M00997 TRANSFAC - 44068835 44068847 2.0E-06 CTCCAAGTGAAGC 13 PPARG_RXRA_MA0065.2 JASPAR - 44069407 44069421 6.0E-06 CTGAGTGAGAGGTCA 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.