Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

TM2D3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 80213 TM2 domain containing 3 chr15 - 102192094 - 102197594 102192594 Transcription Factor Binding Sites   Download all TFBS in the TM2D3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HSF2_HSF_DBD_trimeric_13_1 SELEX + 102193112 102193124 1.0E-06 TTCCAGAAAGTTC 13 GABPA_MA0062.2 JASPAR - 102192579 102192589 4.0E-06 CCGGAAGTGCG 11 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 102192594 102192604 1.0E-05 GCCCCGCCCCC 11 NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX + 102192826 102192836 1.0E-06 GTTAAAGGTCA 11 HSF1_HSF_full_trimeric_13_1 SELEX + 102193112 102193124 1.0E-06 TTCCAGAAAGTTC 13 ESR2_MA0258.1 JASPAR + 102195243 102195260 5.0E-06 CAGGCTCACAGTGACCCC 18 SRY_HMG_DBD_dimeric_13_2 SELEX + 102193382 102193394 9.0E-06 TGAATGACTTTTT 13 NR2E1_nuclearreceptor_full_monomeric_9_1 SELEX - 102193385 102193393 8.0E-06 AAAAGTCAT 9 NR2F1_nuclearreceptor_DBD_monomeric_13_1 SELEX + 102192828 102192840 7.0E-06 TAAAGGTCATCCG 13 Esrrb_MA0141.1 JASPAR + 102192825 102192836 1.0E-05 TGTTAAAGGTCA 12 IRF5_IRF_full_monomeric_11_1 SELEX + 102193532 102193542 2.0E-06 AATCGAAACCA 11 IRF1_MA0050.1 JASPAR - 102193073 102193084 8.0E-06 AGAAGTGAAAGC 12 IRF1_MA0050.1 JASPAR + 102193530 102193541 2.0E-06 GAAATCGAAACC 12 HSF4_HSF_DBD_trimeric_13_1 SELEX + 102193112 102193124 0.0E+00 TTCCAGAAAGTTC 13 SP1_MA0079.2 JASPAR - 102192594 102192603 7.0E-06 CCCCGCCCCC 10 SPDEF_ETS_full_putative-multimer_15_1 SELEX + 102191932 102191946 7.0E-06 TTGGGCCCGGATCCT 15 YY2_C2H2_full_monomeric_11_1 SELEX + 102192557 102192567 4.0E-06 CCCGCCATCTT 11 ESR1_nuclearreceptor_DBD_dimeric_17_1 SELEX + 102195244 102195260 1.0E-05 AGGCTCACAGTGACCCC 17 ESR1_nuclearreceptor_DBD_dimeric_17_1 SELEX - 102195244 102195260 3.0E-06 GGGGTCACTGTGAGCCT 17 ESR1_nuclearreceptor_DBD_dimeric_17_1 SELEX - 102195700 102195716 7.0E-06 GGGGTCAGTGTGAGCCT 17 Foxd3_MA0041.1 JASPAR + 102193431 102193442 8.0E-06 GAATGTTAGCTT 12 IRF9_IRF_full_trimeric_15_1 SELEX + 102193527 102193541 4.0E-06 TAGGAAATCGAAACC 15 Esrra_nuclearreceptor_DBD_monomeric_11_1 SELEX + 102192827 102192837 4.0E-06 TTAAAGGTCAT 11 IRF4_IRF_full_dimeric_15_1 SELEX + 102193528 102193542 3.0E-06 AGGAAATCGAAACCA 15 FOXB1_forkhead_full_monomeric_9_1 SELEX - 102192990 102192998 4.0E-06 TGTAAATAA 9 IRF3_IRF_full_trimeric_21_1 SELEX + 102193522 102193542 0.0E+00 GAGGTTAGGAAATCGAAACCA 21 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX + 102192945 102192959 9.0E-06 AAGGTTCCGAGGACA 15 NRF1_NRF_full_dimeric_12_1 SELEX - 102192571 102192582 1.0E-05 TGCGCAGGCGCT 12 RORA_1_MA0071.1 JASPAR + 102192827 102192836 7.0E-06 TTAAAGGTCA 10 IRF2_MA0051.1 JASPAR + 102193529 102193546 5.0E-06 GGAAATCGAAACCATCCT 18 Zfx_MA0146.1 JASPAR + 102193054 102193067 8.0E-06 GGCGCTCAGGCCTG 14 Zfx_MA0146.1 JASPAR - 102193500 102193513 8.0E-06 CCCGCCTGGGCCTC 14 V_AP2ALPHA_Q6_M01857 TRANSFAC - 102193458 102193468 6.0E-06 CGCCCCCGGCC 11 V_TEL1_02_M02070 TRANSFAC - 102192581 102192590 5.0E-06 CCCGGAAGTG 10 V_ELK1_04_M01165 TRANSFAC - 102192701 102192711 1.0E-05 AACCGGAAGAA 11 V_YY1_02_M00069 TRANSFAC + 102192555 102192574 7.0E-06 CTCCCGCCATCTTGCCAGCG 20 V_ZFX_01_M01593 TRANSFAC - 102193055 102193070 6.0E-06 CGGCAGGCCTGAGCGC 16 V_RORA1_01_M00156 TRANSFAC + 102192825 102192837 7.0E-06 TGTTAAAGGTCAT 13 V_BCL6_01_M01183 TRANSFAC + 102193377 102193392 8.0E-06 TTTGCTGAATGACTTT 16 V_BCL6_01_M01183 TRANSFAC - 102193395 102193410 1.0E-06 TTTCCATGTATTTTTT 16 V_NERF_01_M01976 TRANSFAC - 102192581 102192590 9.0E-06 CCCGGAAGTG 10 V_IK_Q5_M01169 TRANSFAC + 102193495 102193504 3.0E-06 TTTGGGAGGC 10 V_CBF_02_M01080 TRANSFAC + 102192035 102192050 8.0E-06 TTTTGTGTGGTTAACA 16 V_GABP_B_M00341 TRANSFAC - 102192579 102192590 1.0E-06 CCCGGAAGTGCG 12 V_SP1_Q6_01_M00931 TRANSFAC + 102192595 102192604 4.0E-06 GGGGCGGGGC 10 V_NR2F2_03_M02783 TRANSFAC + 102192825 102192840 2.0E-06 TGTTAAAGGTCATCCG 16 V_IRF_Q6_01_M00972 TRANSFAC - 102193074 102193084 3.0E-06 AGAAGTGAAAG 11 V_FOXO3A_Q1_M01137 TRANSFAC - 102192987 102192998 2.0E-06 TGTAAATAAGTG 12 V_YY1_Q6_M00793 TRANSFAC + 102192560 102192568 7.0E-06 GCCATCTTG 9 V_IRF3_05_M02767 TRANSFAC + 102193529 102193542 1.0E-06 GGAAATCGAAACCA 14 V_SP1_03_M02281 TRANSFAC - 102192594 102192603 7.0E-06 CCCCGCCCCC 10 V_PITX2_Q6_M02114 TRANSFAC + 102193481 102193490 1.0E-06 TGTAATCCCA 10 V_LYF1_01_M00141 TRANSFAC + 102193495 102193503 9.0E-06 TTTGGGAGG 9 V_CEBPB_01_M00109 TRANSFAC + 102193523 102193536 7.0E-06 AGGTTAGGAAATCG 14 V_ELF2_02_M02054 TRANSFAC - 102192581 102192590 8.0E-06 CCCGGAAGTG 10 V_ELF4_04_M02850 TRANSFAC + 102193389 102193405 6.0E-06 CTTTTTAAAAAATACAT 17 V_FREAC3_01_M00291 TRANSFAC - 102192987 102193002 5.0E-06 CGACTGTAAATAAGTG 16 V_IRF2_01_M00063 TRANSFAC - 102193073 102193085 6.0E-06 CAGAAGTGAAAGC 13 V_OLF1_01_M00261 TRANSFAC + 102192721 102192742 6.0E-06 GGGAGGTCCCCGAGGAGGATGC 22 V_IRX4_01_M01410 TRANSFAC + 102193397 102193413 5.0E-06 AAAATACATGGAAAAGT 17 V_AMEF2_Q6_M00403 TRANSFAC + 102193438 102193455 3.0E-06 AGCTTTAAAAATCGTATC 18 V_SP1_Q6_M00196 TRANSFAC + 102192593 102192605 1.0E-06 GGGGGGCGGGGCG 13 V_IRC900814_04_M02870 TRANSFAC + 102193441 102193456 9.0E-06 TTTAAAAATCGTATCA 16 V_IRF_Q6_M00772 TRANSFAC + 102193070 102193084 6.0E-06 GCGGCTTTCACTTCT 15 V_ISRE_01_M00258 TRANSFAC - 102193528 102193542 5.0E-06 TGGTTTCGATTTCCT 15 V_SFPI1_04_M02896 TRANSFAC + 102191994 102192007 1.0E-05 ACAATTAGAGAAAC 14 V_GADP_01_M01258 TRANSFAC + 102192581 102192592 3.0E-06 CACTTCCGGGCC 12 V_EVI1_Q3_M02002 TRANSFAC - 102192020 102192028 6.0E-06 TTTCTTGTC 9 V_PEBP_Q6_M00984 TRANSFAC - 102192035 102192049 9.0E-06 GTTAACCACACAAAA 15 V_IRF4_03_M02768 TRANSFAC + 102193530 102193544 4.0E-06 GAAATCGAAACCATC 15 V_ERALPHA_01_M01801 TRANSFAC + 102195245 102195259 4.0E-06 GGCTCACAGTGACCC 15 V_ERALPHA_01_M01801 TRANSFAC - 102195245 102195259 3.0E-06 GGGTCACTGTGAGCC 15 V_ERALPHA_01_M01801 TRANSFAC - 102195701 102195715 8.0E-06 GGGTCAGTGTGAGCC 15 V_MAFK_Q3_M02022 TRANSFAC + 102192466 102192476 8.0E-06 TGACTCACCAC 11 V_ISGF3G_03_M02771 TRANSFAC + 102193529 102193543 2.0E-06 GGAAATCGAAACCAT 15 V_TEL1_01_M01993 TRANSFAC - 102192581 102192590 5.0E-06 CCCGGAAGTG 10 V_SP3_Q3_M00665 TRANSFAC + 102192713 102192726 6.0E-06 AGCCTTCTGGGAGG 14 V_TBP_06_M02814 TRANSFAC + 102193388 102193403 1.0E-05 ACTTTTTAAAAAATAC 16 V_TBP_06_M02814 TRANSFAC - 102193388 102193403 9.0E-06 GTATTTTTTAAAAAGT 16 V_ELF4_01_M01979 TRANSFAC - 102192581 102192590 4.0E-06 CCCGGAAGTG 10 V_IRX5_01_M01472 TRANSFAC + 102193397 102193413 2.0E-06 AAAATACATGGAAAAGT 17 V_IRF7_01_M00453 TRANSFAC + 102193527 102193544 0.0E+00 TAGGAAATCGAAACCATC 18 V_SP4_Q5_M01273 TRANSFAC - 102192594 102192604 1.0E-06 GCCCCGCCCCC 11 V_IRX3_02_M01485 TRANSFAC + 102193397 102193413 1.0E-05 AAAATACATGGAAAAGT 17 V_IRF5_03_M02769 TRANSFAC + 102193529 102193543 1.0E-06 GGAAATCGAAACCAT 15 V_ZSCAN4_04_M02942 TRANSFAC - 102192920 102192935 1.0E-06 TCCAGCACACAACATC 16 V_ERR1_Q2_M00511 TRANSFAC + 102192825 102192838 1.0E-06 TGTTAAAGGTCATC 14 V_TCF7_04_M02921 TRANSFAC + 102193388 102193402 2.0E-06 ACTTTTTAAAAAATA 15 V_ZFP206_01_M01742 TRANSFAC - 102192572 102192582 1.0E-06 TGCGCAGGCGC 11 V_FPM315_01_M01587 TRANSFAC - 102192367 102192378 6.0E-06 CGGGGAGGAGGC 12 V_PITX2_Q2_M00482 TRANSFAC + 102193481 102193491 1.0E-06 TGTAATCCCAG 11 V_STAT6_02_M00500 TRANSFAC - 102193528 102193535 1.0E-05 GATTTCCT 8 V_ESRRA_03_M02748 TRANSFAC + 102192825 102192841 6.0E-06 TGTTAAAGGTCATCCGT 17 V_IRF6_03_M02770 TRANSFAC + 102193530 102193546 4.0E-06 GAAATCGAAACCATCCT 17 V_IRX2_01_M01405 TRANSFAC + 102193397 102193413 2.0E-06 AAAATACATGGAAAAGT 17 V_RARA_03_M02787 TRANSFAC + 102192825 102192840 2.0E-06 TGTTAAAGGTCATCCG 16 V_HSF2_02_M01244 TRANSFAC - 102193112 102193124 0.0E+00 GAACTTTCTGGAA 13 V_ELF_02_M02053 TRANSFAC - 102192581 102192590 1.0E-05 CCCGGAAGTG 10 V_GLI_Q2_M01037 TRANSFAC + 102192718 102192729 6.0E-06 TCTGGGAGGTCC 12 V_SP1_Q2_01_M00933 TRANSFAC - 102192594 102192603 4.0E-06 CCCCGCCCCC 10 V_LPOLYA_B_M00318 TRANSFAC - 102191945 102191952 7.0E-06 CAATAAAG 8 V_SP1_Q4_01_M00932 TRANSFAC + 102192593 102192605 2.0E-06 GGGGGGCGGGGCG 13 V_EHF_07_M02849 TRANSFAC - 102193523 102193538 2.0E-06 TTCGATTTCCTAACCT 16 V_ELK1_03_M01163 TRANSFAC - 102192701 102192711 1.0E-05 AACCGGAAGAA 11 V_IRXB3_01_M01377 TRANSFAC + 102193397 102193413 1.0E-06 AAAATACATGGAAAAGT 17 V_CEBPG_Q6_01_M01869 TRANSFAC + 102193524 102193535 2.0E-06 GGTTAGGAAATC 12 V_ESR2_01_M02377 TRANSFAC + 102195243 102195260 5.0E-06 CAGGCTCACAGTGACCCC 18 V_T3RALPHA_Q6_M01724 TRANSFAC + 102192154 102192164 1.0E-06 GTTCAGGTCAG 11 V_HSF1_Q6_01_M02017 TRANSFAC - 102193111 102193124 0.0E+00 GAACTTTCTGGAAG 14

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.