Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

TMEM62 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 80021 transmembrane protein 62 chr15 + 43420721 - 43426221 43425721 Transcription Factor Binding Sites   Download all TFBS in the TMEM62 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU4F2_POU_full_monomeric_16_1 SELEX - 43425755 43425770 3.0E-06 TTGCATAAGTAATACG 16 GABPA_MA0062.2 JASPAR + 43425915 43425925 3.0E-06 CCGGAAGTGCA 11 POU2F1_POU_DBD_dimeric_14_1 SELEX + 43425758 43425771 6.0E-06 ATTACTTATGCAAA 14 PKNOX1_MEIS_DBD_dimeric_12_1 SELEX + 43427716 43427727 4.0E-06 TGACAGATGCCA 12 PKNOX1_MEIS_DBD_dimeric_12_1 SELEX - 43427716 43427727 5.0E-06 TGGCATCTGTCA 12 POU3F3_POU_DBD_monomeric_12_1 SELEX - 43425759 43425770 9.0E-06 TTGCATAAGTAA 12 POU3F2_POU_DBD_monomeric_13_1 SELEX - 43425759 43425771 7.0E-06 TTTGCATAAGTAA 13 POU5F1P1_POU_DBD_monomeric_9_1 SELEX + 43425764 43425772 8.0E-06 TATGCAAAA 9 POU3F4_POU_DBD_monomeric_11_1 SELEX - 43425759 43425769 9.0E-06 TGCATAAGTAA 11 POU2F3_POU_DBD_monomeric_9_1 SELEX + 43425764 43425772 8.0E-06 TATGCAAAA 9 TBX19_TBX_DBD_dimeric_20_1 SELEX + 43425494 43425513 6.0E-06 CCTGACACATTTGTGAGACA 20 TBX19_TBX_DBD_dimeric_20_1 SELEX - 43425494 43425513 9.0E-06 TGTCTCACAAATGTGTCAGG 20 Pknox2_MEIS_DBD_dimeric_12_1 SELEX + 43427716 43427727 5.0E-06 TGACAGATGCCA 12 Pknox2_MEIS_DBD_dimeric_12_1 SELEX - 43427716 43427727 5.0E-06 TGGCATCTGTCA 12 TGIF2_MEIS_DBD_dimeric_12_1 SELEX + 43427716 43427727 2.0E-06 TGACAGATGCCA 12 TGIF2_MEIS_DBD_dimeric_12_1 SELEX - 43427716 43427727 3.0E-06 TGGCATCTGTCA 12 IRF5_IRF_full_monomeric_11_1 SELEX - 43425730 43425740 1.0E-06 AACCGAAACTC 11 Pou2f2_POU_DBD_monomeric_9_1 SELEX + 43425764 43425772 7.0E-06 TATGCAAAA 9 POU4F3_POU_DBD_monomeric_16_1 SELEX - 43425755 43425770 2.0E-06 TTGCATAAGTAATACG 16 LEF1_HMG_DBD_monomeric_15_1 SELEX + 43427828 43427842 9.0E-06 GGATATCAAAGGAAA 15 Meis3_MEIS_DBD_dimeric_12_1 SELEX + 43427716 43427727 9.0E-06 TGACAGATGCCA 12 Meis3_MEIS_DBD_dimeric_12_1 SELEX - 43427716 43427727 6.0E-06 TGGCATCTGTCA 12 EOMES_TBX_DBD_monomeric_13_1 SELEX + 43425575 43425587 9.0E-06 AAGGTGTTATTAA 13 POU2F3_POU_DBD_dimeric_12_1 SELEX - 43425759 43425770 8.0E-06 TTGCATAAGTAA 12 NFAT5_NFAT_DBD_dimeric_14_1 SELEX + 43427808 43427821 3.0E-06 ATGGAAAAAACCAA 14 Gata1_MA0035.2 JASPAR + 43420843 43420853 6.0E-06 TGAGATAAGGA 11 POU1F1_POU_DBD_monomeric_17_1 SELEX - 43425757 43425773 1.0E-06 GTTTTGCATAAGTAATA 17 IRF9_IRF_full_trimeric_15_1 SELEX - 43425731 43425745 9.0E-06 AAGAGAACCGAAACT 15 T_TBX_full_dimeric_16_1 SELEX + 43425496 43425511 1.0E-06 TGACACATTTGTGAGA 16 T_TBX_full_dimeric_16_1 SELEX - 43425496 43425511 2.0E-06 TCTCACAAATGTGTCA 16 TGIF2LX_MEIS_full_dimeric_12_1 SELEX + 43427716 43427727 5.0E-06 TGACAGATGCCA 12 Pou5f1_MA0142.1 JASPAR + 43425758 43425772 8.0E-06 ATTACTTATGCAAAA 15 ELF1_ETS_full_monomeric_12_1 SELEX + 43425912 43425923 9.0E-06 AGTCCGGAAGTG 12 Meis2_MEIS_DBD_dimeric_12_1 SELEX + 43427716 43427727 5.0E-06 TGACAGATGCCA 12 Meis2_MEIS_DBD_dimeric_12_1 SELEX - 43427716 43427727 9.0E-06 TGGCATCTGTCA 12 GLI2_C2H2_DBD_monomeric_12_1 SELEX - 43426021 43426032 0.0E+00 GCGACCACCCTG 12 IRF3_IRF_full_trimeric_21_1 SELEX - 43425730 43425750 2.0E-06 CAGAAAAGAGAACCGAAACTC 21 POU3F3_POU_DBD_dimeric_12_1 SELEX - 43425759 43425770 1.0E-05 TTGCATAAGTAA 12 TGIF1_MEIS_DBD_dimeric_12_1 SELEX + 43427716 43427727 5.0E-06 TGACAGATGCCA 12 TGIF1_MEIS_DBD_dimeric_12_1 SELEX - 43427716 43427727 4.0E-06 TGGCATCTGTCA 12 POU4F1_POU_DBD_monomeric_14_1 SELEX - 43425757 43425770 3.0E-06 TTGCATAAGTAATA 14 V_FOXP1_01_M00987 TRANSFAC + 43420966 43420985 2.0E-06 TTATTTAAGATGTTTATCAA 20 V_MEIS1BHOXA9_02_M00421 TRANSFAC + 43425496 43425509 3.0E-06 TGACACATTTGTGA 14 V_TCF3_01_M01594 TRANSFAC - 43427827 43427839 2.0E-06 CCTTTGATATCCA 13 V_LEF1_04_M02774 TRANSFAC - 43427827 43427843 6.0E-06 ATTTCCTTTGATATCCA 17 V_POU3F3_01_M03090 TRANSFAC - 43425759 43425775 2.0E-06 TCGTTTTGCATAAGTAA 17 V_GATA1_Q6_M02004 TRANSFAC + 43420840 43420854 1.0E-06 GGTTGAGATAAGGAC 15 V_TCF4_Q5_01_M02033 TRANSFAC + 43427832 43427841 1.0E-06 ATCAAAGGAA 10 V_POU5F1_02_M02245 TRANSFAC + 43425758 43425772 8.0E-06 ATTACTTATGCAAAA 15 V_OCTAMER_01_M01324 TRANSFAC - 43425759 43425775 2.0E-06 TCGTTTTGCATAAGTAA 17 V_OCT1_01_M00135 TRANSFAC + 43425759 43425777 6.0E-06 TTACTTATGCAAAACGAGC 19 V_CEBP_Q2_M00190 TRANSFAC - 43425760 43425773 9.0E-06 GTTTTGCATAAGTA 14 V_IRF3_05_M02767 TRANSFAC - 43425730 43425743 1.0E-06 GAGAACCGAAACTC 14 V_GATA_C_M00203 TRANSFAC + 43420845 43420855 1.0E-06 AGATAAGGACT 11 V_NFAT2_01_M01748 TRANSFAC + 43427808 43427816 3.0E-06 ATGGAAAAA 9 V_LXRB_RXRA_Q5_M02021 TRANSFAC + 43425619 43425633 1.0E-06 TGAGGTCAGGAGTGA 15 V_E2_Q6_M00181 TRANSFAC - 43425711 43425726 8.0E-06 ACACCAATGACGGTGG 16 V_HELIOSA_02_M01004 TRANSFAC + 43427806 43427816 5.0E-06 TCATGGAAAAA 11 V_TCF3_04_M02816 TRANSFAC + 43427827 43427843 2.0E-06 TGGATATCAAAGGAAAT 17 V_IPF1_Q4_M00436 TRANSFAC - 43425579 43425590 5.0E-06 GAGTTAATAACA 12 V_IRF2_01_M00063 TRANSFAC - 43425731 43425743 8.0E-06 GAGAACCGAAACT 13 V_ISRE_01_M00258 TRANSFAC + 43425730 43425744 4.0E-06 GAGTTTCGGTTCTCT 15 V_GATA1_09_M02254 TRANSFAC + 43420843 43420853 6.0E-06 TGAGATAAGGA 11 V_TCF7_03_M02817 TRANSFAC + 43427827 43427843 1.0E-06 TGGATATCAAAGGAAAT 17 V_ISGF3G_03_M02771 TRANSFAC - 43425729 43425743 6.0E-06 GAGAACCGAAACTCT 15 V_LMO2COM_01_M00277 TRANSFAC + 43425802 43425813 9.0E-06 GGGCAGGTGCTG 12 V_OCT4_02_M01124 TRANSFAC - 43420977 43420991 0.0E+00 ATTGTCTTGATAAAC 15 V_SOX11_03_M02795 TRANSFAC + 43427724 43427740 3.0E-06 GCCAAAACAAAGGAACA 17 V_TBX5_01_M01019 TRANSFAC + 43425574 43425585 8.0E-06 GAAGGTGTTATT 12 V_OCT1_B_M00342 TRANSFAC + 43425764 43425773 6.0E-06 TATGCAAAAC 10 V_FOXO1_Q5_M01216 TRANSFAC + 43427726 43427734 8.0E-06 CAAAACAAA 9 V_LEF1_Q2_01_M01022 TRANSFAC - 43425540 43425549 4.0E-06 TATCAAAGTG 10 V_IRF5_03_M02769 TRANSFAC - 43425729 43425743 7.0E-06 GAGAACCGAAACTCT 15 V_CNOT3_01_M01253 TRANSFAC + 43425976 43425985 8.0E-06 GGCCGCGCCC 10 V_FOXL1_02_M02857 TRANSFAC + 43427722 43427737 7.0E-06 ATGCCAAAACAAAGGA 16 V_LUN1_01_M00480 TRANSFAC + 43425306 43425322 1.0E-06 TTCCAGCTACTTAAGGT 17 V_FOXJ3_06_M02855 TRANSFAC + 43427721 43427737 0.0E+00 GATGCCAAAACAAAGGA 17 V_PXR_Q2_M00964 TRANSFAC - 43425580 43425591 8.0E-06 GGAGTTAATAAC 12 V_CEBPB_Q6_M01896 TRANSFAC + 43425763 43425772 9.0E-06 TTATGCAAAA 10 V_LEF1TCF1_Q4_M00978 TRANSFAC - 43427829 43427839 1.0E-05 CCTTTGATATC 11 V_LXRA_RXRA_Q3_M00647 TRANSFAC + 43425617 43425631 2.0E-06 ACTGAGGTCAGGAGT 15 V_SOX4_01_M01308 TRANSFAC + 43427729 43427736 1.0E-05 AACAAAGG 8 V_RFX3_05_M02892 TRANSFAC + 43425535 43425557 8.0E-06 ATTCTCACTTTGATACAACAACC 23 V_SOX2_Q6_M01272 TRANSFAC - 43427725 43427740 2.0E-06 TGTTCCTTTGTTTTGG 16 V_CEBP_Q2_01_M00912 TRANSFAC - 43425760 43425771 8.0E-06 TTTGCATAAGTA 12 V_LTF_Q6_M01692 TRANSFAC + 43425781 43425789 1.0E-05 GTCACTTGC 9 V_SMAD1_01_M01590 TRANSFAC + 43427726 43427737 0.0E+00 CAAAACAAAGGA 12 V_SOX9_Q4_M01284 TRANSFAC + 43427728 43427738 0.0E+00 AAACAAAGGAA 11 V_CEBPA_Q6_M01866 TRANSFAC + 43425760 43425772 3.0E-06 TACTTATGCAAAA 13 V_NANOG_02_M01247 TRANSFAC + 43427722 43427741 1.0E-06 ATGCCAAAACAAAGGAACAG 20 V_OCT4_01_M01125 TRANSFAC + 43425758 43425772 1.0E-06 ATTACTTATGCAAAA 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.