Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ZC3H14 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 79882 zinc finger CCCH-type containing 14 chr14 + 89024252 - 89030190 89029690 Transcription Factor Binding Sites   Download all TFBS in the ZC3H14 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR - 89026341 89026359 6.0E-06 TTTCCTCTAGGGGACAGTG 19 FOXO4_forkhead_DBD_dimeric_14_1 SELEX + 89026356 89026369 1.0E-06 GAAAACATGTTGTT 14 FOXO4_forkhead_DBD_dimeric_14_1 SELEX - 89026356 89026369 0.0E+00 AACAACATGTTTTC 14 MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 89029998 89030015 1.0E-06 GCCATTAAGGGGAAATTA 18 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX + 89029958 89029969 8.0E-06 GCCTTTCTCACA 12 TCF7L1_HMG_full_monomeric_12_1 SELEX - 89029974 89029985 7.0E-06 AAAGAGCAAACG 12 BARHL2_homeodomain_full_dimeric_16_1 SELEX - 89030000 89030015 7.0E-06 TAATTTCCCCTTAATG 16 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX - 89030000 89030015 5.0E-06 TAATTTCCCCTTAATG 16 NFATC1_NFAT_full_dimeric_15_1 SELEX + 89026389 89026403 4.0E-06 TTTCCAAGCTGGGAA 15 NFATC1_NFAT_full_dimeric_15_1 SELEX - 89026389 89026403 5.0E-06 TTCCCAGCTTGGAAA 15 Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 89029998 89030015 1.0E-06 GCCATTAAGGGGAAATTA 18 NR3C1_MA0113.1 JASPAR + 89026408 89026425 1.0E-06 AAAAAAATACTGTCCAGT 18 FOXO3_forkhead_full_dimeric_14_1 SELEX + 89026356 89026369 1.0E-06 GAAAACATGTTGTT 14 FOXO3_forkhead_full_dimeric_14_1 SELEX - 89026356 89026369 1.0E-06 AACAACATGTTTTC 14 NRF1_NRF_full_dimeric_12_1 SELEX - 89029299 89029310 2.0E-06 CGCGCATGCGCC 12 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 89029998 89030015 2.0E-06 GCCATTAAGGGGAAATTA 18 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 89026404 89026416 8.0E-06 AAAAAAAAAAATA 13 FOXO6_forkhead_DBD_dimeric_14_1 SELEX + 89026356 89026369 1.0E-06 GAAAACATGTTGTT 14 FOXO6_forkhead_DBD_dimeric_14_1 SELEX - 89026356 89026369 1.0E-06 AACAACATGTTTTC 14 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 89026401 89026413 5.0E-06 GAAAAAAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 89026402 89026414 6.0E-06 AAAAAAAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 89026404 89026416 4.0E-06 AAAAAAAAAAATA 13 Zfx_MA0146.1 JASPAR + 89029600 89029613 7.0E-06 GACGCCGCGGCCTG 14 FOXO1_forkhead_DBD_dimeric_14_1 SELEX + 89026356 89026369 1.0E-06 GAAAACATGTTGTT 14 FOXO1_forkhead_DBD_dimeric_14_1 SELEX - 89026356 89026369 0.0E+00 AACAACATGTTTTC 14 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 89026401 89026414 8.0E-06 GAAAAAAAAAAAAA 14 V_AP2ALPHA_Q6_M01857 TRANSFAC - 89029360 89029370 6.0E-06 CGCCCCCGGCC 11 V_STAT3_01_M00225 TRANSFAC + 89026363 89026383 8.0E-06 TGTTGTTTCCCCTAAATCAGA 21 V_TST1_02_M01316 TRANSFAC - 89029111 89029127 5.0E-06 TAAGAATGAATTAAATG 17 V_ZFX_01_M01593 TRANSFAC - 89029601 89029616 3.0E-06 GGCCAGGCCGCGGCGT 16 V_HMGIY_Q3_M01010 TRANSFAC - 89026406 89026420 3.0E-06 ACAGTATTTTTTTTT 15 V_EVI1_04_M00081 TRANSFAC + 89026400 89026414 4.0E-06 GGAAAAAAAAAAAAA 15 V_EVI1_04_M00081 TRANSFAC + 89026402 89026416 2.0E-06 AAAAAAAAAAAAATA 15 V_POU1F1_Q6_M00744 TRANSFAC - 89029113 89029122 7.0E-06 ATGAATTAAA 10 V_SP1_02_M01303 TRANSFAC + 89029841 89029851 5.0E-06 GGGGTGGGGGG 11 V_NR3C1_01_M02219 TRANSFAC + 89026408 89026425 1.0E-06 AAAAAAATACTGTCCAGT 18 V_TCFAP2E_04_M02926 TRANSFAC + 89026398 89026411 9.0E-06 TGGGAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 89026401 89026414 3.0E-06 GAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 89026402 89026415 3.0E-06 AAAAAAAAAAAAAT 14 V_TCFAP2E_04_M02926 TRANSFAC + 89026403 89026416 1.0E-06 AAAAAAAAAAAATA 14 V_REX1_01_M01695 TRANSFAC - 89026461 89026470 1.0E-05 GAAGCCATTA 10 V_NRSE_B_M00325 TRANSFAC + 89029469 89029489 8.0E-06 CGCAGAGCCATGGAGATCGGC 21 V_RPC155_01_M01798 TRANSFAC - 89029063 89029078 2.0E-06 ACGCGAGTTCAAATCC 16 V_ELF4_04_M02850 TRANSFAC + 89026399 89026415 1.0E-06 GGGAAAAAAAAAAAAAT 17 V_ELF4_04_M02850 TRANSFAC + 89026400 89026416 1.0E-06 GGAAAAAAAAAAAAATA 17 V_ELF4_04_M02850 TRANSFAC + 89026401 89026417 0.0E+00 GAAAAAAAAAAAAATAC 17 V_ZNF219_01_M01122 TRANSFAC - 89029842 89029853 2.0E-06 CGCCCCCCACCC 12 V_HELIOSA_02_M01004 TRANSFAC - 89029944 89029954 6.0E-06 TCTAGGAAAAC 11 V_ZFP105_03_M02827 TRANSFAC + 89026400 89026414 4.0E-06 GGAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 89026401 89026415 2.0E-06 GAAAAAAAAAAAAAT 15 V_ZFP105_03_M02827 TRANSFAC + 89026402 89026416 0.0E+00 AAAAAAAAAAAAATA 15 V_ZFP105_03_M02827 TRANSFAC + 89026403 89026417 1.0E-06 AAAAAAAAAAAATAC 15 V_NFAT_Q6_M00302 TRANSFAC + 89026351 89026362 6.0E-06 TAGAGGAAAACA 12 V_IRX4_01_M01410 TRANSFAC - 89026354 89026370 5.0E-06 AAACAACATGTTTTCCT 17 V_SP1SP3_Q4_M01219 TRANSFAC - 89029378 89029388 5.0E-06 CCGCCTCCTCC 11 V_PIT1_01_M01465 TRANSFAC - 89029111 89029127 3.0E-06 TAAGAATGAATTAAATG 17 V_MUSCLE_INI_B_M00321 TRANSFAC - 89029835 89029855 2.0E-06 ACCGCCCCCCACCCCGCACCC 21 V_NCX_02_M01420 TRANSFAC - 89029108 89029124 8.0E-06 GAATGAATTAAATGTGT 17 V_IRX3_01_M01318 TRANSFAC - 89026354 89026370 7.0E-06 AAACAACATGTTTTCCT 17 V_MZF1_02_M00084 TRANSFAC - 89026368 89026380 9.0E-06 GATTTAGGGGAAA 13 V_IRX5_01_M01472 TRANSFAC - 89026354 89026370 7.0E-06 AAACAACATGTTTTCCT 17 V_PTF1BETA_Q6_M00657 TRANSFAC + 89030006 89030019 4.0E-06 GGGGAAATTACAAG 14 V_IRX3_02_M01485 TRANSFAC - 89026354 89026370 1.0E-05 AAACAACATGTTTTCCT 17 V_MTF1_06_M02882 TRANSFAC + 89026403 89026416 1.0E-06 AAAAAAAAAAAATA 14 V_FAC1_01_M00456 TRANSFAC + 89026401 89026414 9.0E-06 GAAAAAAAAAAAAA 14 V_FAC1_01_M00456 TRANSFAC + 89026403 89026416 2.0E-06 AAAAAAAAAAAATA 14 V_BRN4_01_M01473 TRANSFAC - 89029111 89029127 3.0E-06 TAAGAATGAATTAAATG 17 V_T3R_Q6_M00963 TRANSFAC - 89029730 89029738 7.0E-06 CCTGTCCTT 9 V_GFI1B_01_M01058 TRANSFAC + 89026375 89026386 5.0E-06 TAAATCAGAGAA 12 V_ZBTB4_04_M02929 TRANSFAC - 89029041 89029056 5.0E-06 CACTTACTGTCAGTAT 16 V_ZFP206_01_M01742 TRANSFAC + 89029281 89029291 1.0E-06 TGCGCAGGCGC 11 V_ZFP206_01_M01742 TRANSFAC - 89029300 89029310 2.0E-06 CGCGCATGCGC 11 V_BDP1_01_M01796 TRANSFAC + 89029063 89029074 0.0E+00 GGATTTGAACTC 12 V_ZFP161_04_M02933 TRANSFAC + 89029442 89029455 1.0E-06 GCCGCGCAGTGCTG 14 V_NRSF_01_M00256 TRANSFAC + 89029484 89029504 9.0E-06 ATCGGCACCGAGATCAGCCGC 21 V_FOXO3_01_M00477 TRANSFAC + 89029939 89029952 8.0E-06 GTCTTGTTTTCCTA 14 V_ASCL2_04_M02841 TRANSFAC - 89029333 89029348 9.0E-06 GTATCCCCGCCCCGGC 16 V_STAT1STAT1_Q3_M01212 TRANSFAC + 89026367 89026379 9.0E-06 GTTTCCCCTAAAT 13 V_NRF1_Q6_M00652 TRANSFAC + 89029301 89029310 4.0E-06 CGCATGCGCG 10 V_T3RBETA_Q6_01_M02119 TRANSFAC + 89029721 89029737 8.0E-06 GGGAAATGGAAGGACAG 17 V_SRF_06_M02916 TRANSFAC + 89026396 89026412 6.0E-06 GCTGGGAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 89026397 89026413 1.0E-06 CTGGGAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 89026398 89026414 2.0E-06 TGGGAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 89026399 89026415 0.0E+00 GGGAAAAAAAAAAAAAT 17 V_SRF_06_M02916 TRANSFAC + 89026400 89026416 0.0E+00 GGAAAAAAAAAAAAATA 17 V_SRF_06_M02916 TRANSFAC + 89026401 89026417 0.0E+00 GAAAAAAAAAAAAATAC 17 V_SRF_06_M02916 TRANSFAC + 89026402 89026418 4.0E-06 AAAAAAAAAAAAATACT 17 V_SRF_06_M02916 TRANSFAC + 89026403 89026419 6.0E-06 AAAAAAAAAAAATACTG 17 V_SRF_06_M02916 TRANSFAC + 89026404 89026420 5.0E-06 AAAAAAAAAAATACTGT 17 V_PUR1_Q4_M01721 TRANSFAC - 89026341 89026349 6.0E-06 GGGACAGTG 9 V_E2F_01_M00024 TRANSFAC - 89029259 89029273 4.0E-06 TACCCGCGAAACCTG 15 V_SOX1_03_M02802 TRANSFAC + 89029112 89029127 4.0E-06 ATTTAATTCATTCTTA 16 V_GFI1_Q6_01_M02010 TRANSFAC - 89026375 89026384 7.0E-06 CTCTGATTTA 10 V_TAACC_B_M00331 TRANSFAC - 89029098 89029120 9.0E-06 GAATTAAATGTGTAGCAGAAAGA 23 V_IRXB3_01_M01377 TRANSFAC - 89026354 89026370 6.0E-06 AAACAACATGTTTTCCT 17 V_BRF1_01_M01747 TRANSFAC - 89029062 89029074 3.0E-06 GAGTTCAAATCCA 13 V_TCF3_05_M02920 TRANSFAC + 89026397 89026411 2.0E-06 CTGGGAAAAAAAAAA 15 V_TCF3_05_M02920 TRANSFAC + 89026398 89026412 0.0E+00 TGGGAAAAAAAAAAA 15 V_TCF3_05_M02920 TRANSFAC + 89026399 89026413 4.0E-06 GGGAAAAAAAAAAAA 15 V_STAT1_05_M01260 TRANSFAC - 89026359 89026380 9.0E-06 GATTTAGGGGAAACAACATGTT 22 V_PAX4_04_M00380 TRANSFAC + 89026403 89026432 8.0E-06 AAAAAAAAAAAATACTGTCCAGTATAGTCT 30

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.