Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

PDZD3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 79849 PDZ domain containing 3 chr11 + 119051165 - 119056665 119056165 Transcription Factor Binding Sites   Download all TFBS in the PDZD3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SOX8_HMG_full_dimeric_17_1 SELEX + 119056146 119056162 7.0E-06 GATCAGTGGCTGTGATG 17 Pax4_MA0068.1 JASPAR + 119056043 119056072 0.0E+00 AAAAAAAAAAAAAAAAAAAAAGACTCTCAC 30 Pax4_MA0068.1 JASPAR + 119056044 119056073 2.0E-06 AAAAAAAAAAAAAAAAAAAAGACTCTCACT 30 Pax4_MA0068.1 JASPAR + 119056045 119056074 7.0E-06 AAAAAAAAAAAAAAAAAAAGACTCTCACTC 30 Pax4_MA0068.1 JASPAR + 119056046 119056075 0.0E+00 AAAAAAAAAAAAAAAAAAGACTCTCACTCC 30 Pax4_MA0068.1 JASPAR + 119056047 119056076 3.0E-06 AAAAAAAAAAAAAAAAAGACTCTCACTCCC 30 Pax4_MA0068.1 JASPAR + 119056048 119056077 0.0E+00 AAAAAAAAAAAAAAAAGACTCTCACTCCCG 30 Pax4_MA0068.1 JASPAR + 119056049 119056078 7.0E-06 AAAAAAAAAAAAAAAGACTCTCACTCCCGT 30 Pax4_MA0068.1 JASPAR + 119056050 119056079 7.0E-06 AAAAAAAAAAAAAAGACTCTCACTCCCGTT 30 Pax4_MA0068.1 JASPAR + 119056052 119056081 8.0E-06 AAAAAAAAAAAAGACTCTCACTCCCGTTAA 30 V_P300_01_M00033 TRANSFAC - 119056066 119056079 4.0E-06 AACGGGAGTGAGAG 14 V_PAX4_04_M00380 TRANSFAC + 119056043 119056072 2.0E-06 AAAAAAAAAAAAAAAAAAAAAGACTCTCAC 30 V_PAX4_04_M00380 TRANSFAC + 119056044 119056073 0.0E+00 AAAAAAAAAAAAAAAAAAAAGACTCTCACT 30 V_PAX4_04_M00380 TRANSFAC + 119056046 119056075 0.0E+00 AAAAAAAAAAAAAAAAAAGACTCTCACTCC 30 V_PAX4_04_M00380 TRANSFAC + 119056047 119056076 2.0E-06 AAAAAAAAAAAAAAAAAGACTCTCACTCCC 30 V_PAX4_04_M00380 TRANSFAC + 119056048 119056077 1.0E-06 AAAAAAAAAAAAAAAAGACTCTCACTCCCG 30 V_PAX4_04_M00380 TRANSFAC + 119056049 119056078 2.0E-06 AAAAAAAAAAAAAAAGACTCTCACTCCCGT 30

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.