Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

VTCN1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
79679 V-set domain containing T cell activation inhibitor 1 chr1 -117753082 - 117758582 117753582

Transcription Factor Binding Sites

 
Download all TFBS in the VTCN1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
NR2F1_nuclearreceptor_DBD_monomeric_13_1 SELEX - 117751924 117751936 6.0E-06 CAGAGGTCAGATG 13
TFAP2B_TFAP_DBD_dimeric_11_1 SELEX - 117744646 117744656 5.0E-06 AGCCCCAGGCA 11
TFAP2A_TFAP_DBD_dimeric_11_1 SELEX - 117744646 117744656 6.0E-06 AGCCCCAGGCA 11
IRF7_IRF_DBD_trimeric_17_1 SELEX + 117744668 117744684 4.0E-06 GAAAAGAAATTCCCTCC 17
GRHL1_CP2_DBD_dimer-of-dimers_17_1 SELEX + 117751877 117751893 7.0E-06 AACCAGTCAGACTGGAT 17
GRHL1_CP2_DBD_dimer-of-dimers_17_1 SELEX - 117751877 117751893 3.0E-06 ATCCAGTCTGACTGGTT 17
TFAP2C_TFAP_full_dimeric_11_1 SELEX - 117744646 117744656 6.0E-06 AGCCCCAGGCA 11
Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX - 117744646 117744656 6.0E-06 AGCCCCAGGCA 11
Irx3_homeodomain_DBD_dimeric_12_1 SELEX + 117744701 117744712 5.0E-06 TTACATGACTTA 12
V_BTEB3_Q5_M01865 TRANSFAC + 117751954 117751966 9.0E-06 TTGCAGGAGGAGT 13
V_IK_Q5_M01169 TRANSFAC + 117753728 117753737 1.0E-06 TTTGGGAGGG 10
V_P50P50_Q3_M01223 TRANSFAC - 117744671 117744683 1.0E-05 GAGGGAATTTCTT 13
V_TR4_Q2_M01725 TRANSFAC + 117751926 117751936 7.0E-06 TCTGACCTCTG 11
V_LYF1_01_M00141 TRANSFAC + 117753728 117753736 9.0E-06 TTTGGGAGG 9
V_ZFP410_03_M02832 TRANSFAC - 117751914 117751930 7.0E-06 TCAGATGGGATGTGTGG 17
V_NFKB_Q6_M00194 TRANSFAC - 117744670 117744683 9.0E-06 GAGGGAATTTCTTT 14
V_AP1_Q4_M00188 TRANSFAC + 117753540 117753550 1.0E-05 GGTGACTCACA 11
V_JUNDM2_04_M02876 TRANSFAC + 117753537 117753552 0.0E+00 CTTGGTGACTCACAAC 16
V_JUNDM2_04_M02876 TRANSFAC - 117753538 117753553 2.0E-06 GGTTGTGAGTCACCAA 16
V_PITX3_01_M01343 TRANSFAC - 117751857 117751872 9.0E-06 TGGAGGATTAGCAGGA 16
V_IK3_01_M00088 TRANSFAC - 117753645 117753657 9.0E-06 TGCAGGGAATTCT 13
V_OCT4_02_M01124 TRANSFAC - 117748287 117748301 1.0E-06 ATTCTCTTGCTAGTT 15
V_LUN1_01_M00480 TRANSFAC - 117753491 117753507 9.0E-06 ACCCAGATACGCTGGGA 17
V_TR4_03_M01782 TRANSFAC - 117751928 117751940 5.0E-06 TGTTCAGAGGTCA 13
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL