Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

NOX5 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 79400 NADPH oxidase, EF-hand calcium binding domain 5 chr15 + 69217838 - 69223338 69222838 Transcription Factor Binding Sites   Download all TFBS in the NOX5 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints EMX2_homeodomain_DBD_dimeric_14_1 SELEX + 69225528 69225541 6.0E-06 GTATTAAGTAATTG 14 EMX2_homeodomain_DBD_dimeric_14_1 SELEX - 69225528 69225541 8.0E-06 CAATTACTTAATAC 14 LHX2_homeodomain_DBD_dimeric_15_1 SELEX + 69225536 69225550 6.0E-06 TAATTGCATTTATTG 15 Lhx8_homeodomain_DBD_dimeric_12_1 SELEX + 69225536 69225547 1.0E-06 TAATTGCATTTA 12 Lhx8_homeodomain_DBD_dimeric_12_1 SELEX - 69225536 69225547 0.0E+00 TAAATGCAATTA 12 SOX8_HMG_full_dimeric_17_1 SELEX + 69225533 69225549 5.0E-06 AAGTAATTGCATTTATT 17 Pax4_MA0068.1 JASPAR - 69225521 69225550 7.0E-06 CAATAAATGCAATTACTTAATACACCCGTG 30 PROP1_homeodomain_full_dimeric_11_1 SELEX - 69225536 69225546 8.0E-06 AAATGCAATTA 11 SP1_MA0079.2 JASPAR + 69222771 69222780 7.0E-06 CCCCGCCCCC 10 SP1_MA0079.2 JASPAR + 69222823 69222832 3.0E-06 CCCCTCCCCC 10 PHOX2B_homeodomain_full_dimeric_11_1 SELEX - 69225536 69225546 4.0E-06 AAATGCAATTA 11 Alx4_homeodomain_DBD_dimeric_13_1 SELEX - 69225535 69225547 9.0E-06 TAAATGCAATTAC 13 CART1_homeodomain_DBD_dimeric_13_1 SELEX - 69225535 69225547 5.0E-06 TAAATGCAATTAC 13 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 69222908 69222922 7.0E-06 CGAAAGGGAAGGTGT 15 LHX6_homeodomain_full_dimeric_12_1 SELEX + 69225536 69225547 2.0E-06 TAATTGCATTTA 12 TBX20_TBX_DBD_monomeric_15_1 SELEX - 69225466 69225480 7.0E-06 AAAAATGTGTCAAAG 15 PHOX2A_homeodomain_DBD_dimeric_11_1 SELEX - 69225536 69225546 5.0E-06 AAATGCAATTA 11 NRF1_NRF_full_dimeric_12_1 SELEX + 69222727 69222738 8.0E-06 CGAGCATGCGCA 12 NRF1_NRF_full_dimeric_12_1 SELEX - 69222727 69222738 7.0E-06 TGCGCATGCTCG 12 V_CDX2_Q5_01_M01659 TRANSFAC - 69225541 69225551 1.0E-05 TCAATAAATGC 11 V_ZFP410_04_M02936 TRANSFAC - 69222741 69222757 6.0E-06 CCGCCCCGCCCCTTCCT 17 V_HMGIY_Q3_M01010 TRANSFAC - 69225531 69225545 1.0E-06 AATGCAATTACTTAA 15 V_PROP1_01_M01294 TRANSFAC + 69225536 69225546 5.0E-06 TAATTGCATTT 11 V_SP1_Q6_01_M00931 TRANSFAC + 69222746 69222755 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC + 69222751 69222760 4.0E-06 GGGGCGGGGC 10 V_ISL2_01_M01328 TRANSFAC - 69225528 69225543 6.0E-06 TGCAATTACTTAATAC 16 V_CEBP_Q2_M00190 TRANSFAC - 69225506 69225519 7.0E-06 TGTTTGCGTAATAA 14 V_SP1_03_M02281 TRANSFAC + 69222771 69222780 7.0E-06 CCCCGCCCCC 10 V_SP1_03_M02281 TRANSFAC + 69222823 69222832 3.0E-06 CCCCTCCCCC 10 V_HOXA2_01_M01402 TRANSFAC - 69225530 69225545 9.0E-06 AATGCAATTACTTAAT 16 V_DLX2_01_M01468 TRANSFAC - 69225530 69225545 2.0E-06 AATGCAATTACTTAAT 16 V_HOXC6_01_M01406 TRANSFAC - 69225530 69225546 9.0E-06 AAATGCAATTACTTAAT 17 V_PSX1_01_M01435 TRANSFAC + 69225527 69225543 9.0E-06 TGTATTAAGTAATTGCA 17 V_TCFAP2E_04_M02926 TRANSFAC - 69225474 69225487 7.0E-06 GTCTAGAAAAAATG 14 V_HBP1_Q2_M01661 TRANSFAC - 69225544 69225552 4.0E-06 TTCAATAAA 9 V_GC_01_M00255 TRANSFAC + 69222744 69222757 1.0E-06 AAGGGGCGGGGCGG 14 V_HOXA6_01_M01392 TRANSFAC - 69225530 69225545 1.0E-06 AATGCAATTACTTAAT 16 V_ZBP89_Q4_M01816 TRANSFAC + 69222824 69222833 4.0E-06 CCCTCCCCCA 10 V_SP1_Q6_M00196 TRANSFAC + 69222744 69222756 1.0E-06 AAGGGGCGGGGCG 13 V_SP1_Q6_M00196 TRANSFAC + 69222749 69222761 7.0E-06 GCGGGGCGGGGCG 13 V_HOXB6_01_M01460 TRANSFAC - 69225502 69225517 8.0E-06 TTTGCGTAATAACCTC 16 V_HOXB6_01_M01460 TRANSFAC + 69225530 69225545 3.0E-06 ATTAAGTAATTGCATT 16 V_HOXB6_01_M01460 TRANSFAC - 69225532 69225547 5.0E-06 TAAATGCAATTACTTA 16 V_MAZ_Q6_01_M02023 TRANSFAC - 69222819 69222832 2.0E-06 GGGGGAGGGGAGAG 14 V_SP1SP3_Q4_M01219 TRANSFAC + 69222773 69222783 8.0E-06 CCGCCCCCTGC 11 V_PBX1_05_M01967 TRANSFAC + 69223056 69223069 4.0E-06 AGTGAGTGACGGGC 14 V_NKX3A_01_M00451 TRANSFAC + 69225529 69225540 3.0E-06 TATTAAGTAATT 12 V_NCX_02_M01420 TRANSFAC + 69225528 69225544 8.0E-06 GTATTAAGTAATTGCAT 17 V_SP4_Q5_M01273 TRANSFAC - 69222745 69222755 8.0E-06 GCCCCGCCCCT 11 V_SP4_Q5_M01273 TRANSFAC - 69222750 69222760 2.0E-06 GCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC + 69222770 69222780 5.0E-06 CCCCCGCCCCC 11 V_POU5F1_01_M01307 TRANSFAC - 69225536 69225545 4.0E-06 AATGCAATTA 10 V_CEBPA_01_M00116 TRANSFAC + 69225506 69225519 7.0E-06 TTATTACGCAAACA 14 V_DMRT7_01_M01151 TRANSFAC + 69225468 69225481 1.0E-06 TTGACACATTTTTT 14 V_ZFP206_01_M01742 TRANSFAC - 69222728 69222738 3.0E-06 TGCGCATGCTC 11 V_BARX2_01_M01431 TRANSFAC + 69225532 69225547 6.0E-06 TAAGTAATTGCATTTA 16 V_ZFP281_01_M01597 TRANSFAC - 69222823 69222833 1.0E-06 TGGGGGAGGGG 11 V_MOX1_01_M01443 TRANSFAC - 69225530 69225545 4.0E-06 AATGCAATTACTTAAT 16 V_BSX_01_M01442 TRANSFAC - 69225530 69225545 1.0E-06 AATGCAATTACTTAAT 16 V_SP1_Q2_01_M00933 TRANSFAC - 69222745 69222754 7.0E-06 CCCCGCCCCT 10 V_SP1_Q2_01_M00933 TRANSFAC + 69222771 69222780 4.0E-06 CCCCGCCCCC 10 V_HMX3_02_M01413 TRANSFAC - 69225530 69225546 9.0E-06 AAATGCAATTACTTAAT 17 V_SP1_Q4_01_M00932 TRANSFAC + 69222744 69222756 1.0E-06 AAGGGGCGGGGCG 13 V_BARX1_01_M01340 TRANSFAC - 69225530 69225545 1.0E-06 AATGCAATTACTTAAT 16 V_DMRT1_01_M01146 TRANSFAC + 69225468 69225482 9.0E-06 TTGACACATTTTTTC 15 V_HOX13_02_M01452 TRANSFAC - 69225530 69225545 7.0E-06 AATGCAATTACTTAAT 16 V_HOXC8_01_M01321 TRANSFAC + 69225530 69225545 9.0E-06 ATTAAGTAATTGCATT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.