Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

IRX6


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSSMotifs
79190 iroquois homeobox 6 chr16 +55353470 - 55358970 55358470 V_IRXB3_01_M01377

Transcription Factor Binding Sites

 
Download all TFBS in the IRX6 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
CTCF_MA0139.1 JASPAR + 55357812 55357830 1.0E-06 CGGCCTCGAGGGGGCGCTA 19
ZNF75A_C2H2_DBD_monomeric_12_1 SELEX + 55362581 55362592 9.0E-06 GCTTTTCTCACT 12
Esrrb_MA0141.1 JASPAR + 55357866 55357877 6.0E-06 GCTCCAAGGTCA 12
SP1_MA0079.2 JASPAR + 55358161 55358170 3.0E-06 CCCCTCCCCC 10
znf143_MA0088.1 JASPAR - 55359231 55359250 1.0E-06 GATTTTCCAGCGTGCACTCC 20
ESRRG_nuclearreceptor_full_monomeric_10_1 SELEX + 55357869 55357878 6.0E-06 CCAAGGTCAA 10
CTCF_C2H2_full_monomeric_17_1 SELEX - 55357813 55357829 9.0E-06 AGCGCCCCCTCGAGGCC 17
TEAD3_TEA_DBD_dimeric_17_1 SELEX + 55362551 55362567 5.0E-06 ACATTCCTCGGATTTCC 17
Esrra_nuclearreceptor_DBD_monomeric_11_1 SELEX + 55357868 55357878 4.0E-06 TCCAAGGTCAA 11
FEV_MA0156.1 JASPAR - 55362601 55362608 1.0E-05 CAGGAAAT 8
Myf_MA0055.1 JASPAR + 55357850 55357861 3.0E-06 AGGCAGCTGCAG 12
ESRRB_nuclearreceptor_DBD_monomeric_11_1 SELEX + 55357869 55357879 8.0E-06 CCAAGGTCAAG 11
TEAD1_TEA_full_dimeric_17_1 SELEX + 55362551 55362567 4.0E-06 ACATTCCTCGGATTTCC 17
TP53_MA0106.1 JASPAR + 55357719 55357738 4.0E-06 GAGGAGATGCCCAGGGATCT 20
TEAD1_MA0090.1 JASPAR + 55362550 55362561 6.0E-06 GACATTCCTCGG 12
V_NFAT_Q4_01_M00935 TRANSFAC + 55359241 55359250 7.0E-06 CTGGAAAATC 10
V_LRH1_Q5_01_M02098 TRANSFAC + 55357867 55357877 7.0E-06 CTCCAAGGTCA 11
V_NFAT3_Q3_M01734 TRANSFAC - 55359242 55359251 1.0E-05 AGATTTTCCA 10
V_GCNF_Q3_M02009 TRANSFAC + 55357870 55357879 1.0E-06 CAAGGTCAAG 10
V_SP1_03_M02281 TRANSFAC + 55358161 55358170 3.0E-06 CCCCTCCCCC 10
V_ZFP691_03_M02833 TRANSFAC - 55359262 55359278 1.0E-05 GTCAGAGTGCTCATGTT 17
V_MYF_01_M01302 TRANSFAC + 55357850 55357861 3.0E-06 AGGCAGCTGCAG 12
V_FKLF_Q5_M01837 TRANSFAC - 55358142 55358151 5.0E-06 GGGGTGGGCG 10
V_ZBP89_Q4_M01816 TRANSFAC + 55358162 55358171 4.0E-06 CCCTCCCCCA 10
V_ERR1_Q3_M01841 TRANSFAC - 55357866 55357880 0.0E+00 CCTTGACCTTGGAGC 15
V_DAX1_01_M01248 TRANSFAC + 55357864 55357883 5.0E-06 AAGCTCCAAGGTCAAGGCCC 20
V_TEF_01_M01305 TRANSFAC + 55362550 55362561 6.0E-06 GACATTCCTCGG 12
V_STAF_02_M00264 TRANSFAC - 55359229 55359249 3.0E-06 ATTTTCCAGCGTGCACTCCGG 21
V_CTCF_02_M01259 TRANSFAC + 55357809 55357828 6.0E-06 CCTCGGCCTCGAGGGGGCGC 20
V_CTCF_01_M01200 TRANSFAC + 55357811 55357830 0.0E+00 TCGGCCTCGAGGGGGCGCTA 20
V_SF1_Q6_01_M01132 TRANSFAC - 55357869 55357877 7.0E-06 TGACCTTGG 9
V_GCNF_01_M00526 TRANSFAC + 55357868 55357885 6.0E-06 TCCAAGGTCAAGGCCCTG 18
V_TEF1_Q6_03_M01817 TRANSFAC - 55362551 55362559 3.0E-06 GAGGAATGT 9
V_ERR2_01_M01589 TRANSFAC + 55357869 55357880 5.0E-06 CCAAGGTCAAGG 12
V_STAT6_02_M00500 TRANSFAC + 55362600 55362607 1.0E-05 GATTTCCT 8
V_ESRRA_03_M02748 TRANSFAC + 55357866 55357882 6.0E-06 GCTCCAAGGTCAAGGCC 17
V_ZFP281_01_M01597 TRANSFAC - 55358161 55358171 1.0E-06 TGGGGGAGGGG 11
V_MEF3_B_M00319 TRANSFAC - 55359259 55359271 6.0E-06 TGCTCATGTTTCA 13
V_ZFP281_04_M02831 TRANSFAC + 55358159 55358173 2.0E-06 TCCCCCTCCCCCACG 15
V_NUR77_Q5_M01217 TRANSFAC - 55357869 55357878 7.0E-06 TTGACCTTGG 10
V_ERR1_Q2_01_M02093 TRANSFAC + 55357870 55357880 2.0E-06 CAAGGTCAAGG 11
V_FEV_01_M02269 TRANSFAC - 55362601 55362608 1.0E-05 CAGGAAAT 8
V_T3RALPHA_Q6_M01724 TRANSFAC - 55359253 55359263 6.0E-06 TTTCAGGTCAC 11
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL