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RBM42


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
79171 RNA binding motif protein 42 chr19 +36114979 - 36120479 36119979

Transcription Factor Binding Sites

 
Download all TFBS in the RBM42 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
STAT1_MA0137.2 JASPAR + 36119526 36119540 1.0E-06 GTCTTCCTGGAAACC 15
STAT1_MA0137.2 JASPAR - 36119526 36119540 7.0E-06 GGTTTCCAGGAAGAC 15
NFYA_MA0060.1 JASPAR - 36119847 36119862 2.0E-06 ATAGGCCAATCAGAGT 16
NFYA_MA0060.1 JASPAR - 36119885 36119900 9.0E-06 GAGAGCCAATGAGATT 16
XBP1_bZIP_DBD_dimeric_12_1 SELEX + 36119912 36119923 2.0E-06 TATGACGTCATG 12
XBP1_bZIP_DBD_dimeric_12_1 SELEX - 36119912 36119923 4.0E-06 CATGACGTCATA 12
Creb5_bZIP_DBD_dimeric_12_1 SELEX + 36119912 36119923 2.0E-06 TATGACGTCATG 12
Creb5_bZIP_DBD_dimeric_12_1 SELEX - 36119912 36119923 1.0E-06 CATGACGTCATA 12
Klf4_MA0039.2 JASPAR + 36119873 36119882 3.0E-06 AGGGTGTGGC 10
JDP2_bZIP_full_dimeric_12_1 SELEX + 36119912 36119923 1.0E-06 TATGACGTCATG 12
JDP2_bZIP_full_dimeric_12_1 SELEX - 36119912 36119923 1.0E-06 CATGACGTCATA 12
ATF7_bZIP_DBD_dimeric_14_1 SELEX + 36119911 36119924 1.0E-06 GTATGACGTCATGC 14
ATF7_bZIP_DBD_dimeric_14_1 SELEX - 36119911 36119924 1.0E-06 GCATGACGTCATAC 14
NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX + 36119456 36119471 4.0E-06 TCATCTTTAAATGTCT 16
NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX - 36119456 36119471 2.0E-06 AGACATTTAAAGATGA 16
CREB3_bZIP_full_dimeric_14_1 SELEX + 36119911 36119924 4.0E-06 GTATGACGTCATGC 14
CREB3_bZIP_full_dimeric_14_1 SELEX - 36119911 36119924 2.0E-06 GCATGACGTCATAC 14
Stat3_MA0144.1 JASPAR - 36119528 36119537 1.0E-06 TTCCAGGAAG 10
Stat3_MA0144.1 JASPAR + 36119529 36119538 4.0E-06 TTCCTGGAAA 10
RUNX1_MA0002.2 JASPAR - 36119536 36119546 5.0E-06 ACCTGTGGTTT 11
V_AML_Q6_M00769 TRANSFAC - 36119534 36119548 9.0E-06 CGACCTGTGGTTTCC 15
V_MEQCJUN_02_M02048 TRANSFAC + 36119912 36119922 2.0E-06 TATGACGTCAT 11
V_MEQCJUN_02_M02048 TRANSFAC - 36119913 36119923 3.0E-06 CATGACGTCAT 11
V_ATF3_Q6_01_M01863 TRANSFAC - 36119912 36119922 9.0E-06 ATGACGTCATA 11
V_ATF3_Q6_01_M01863 TRANSFAC + 36119913 36119923 7.0E-06 ATGACGTCATG 11
V_GABPA_04_M02858 TRANSFAC + 36119859 36119874 5.0E-06 CTATATTCCCCCTGAG 16
V_STAT5B_01_M00459 TRANSFAC - 36119526 36119540 9.0E-06 GGTTTCCAGGAAGAC 15
V_JUNDM2_03_M02772 TRANSFAC + 36119910 36119925 5.0E-06 TGTATGACGTCATGCG 16
V_JUNDM2_03_M02772 TRANSFAC - 36119910 36119925 2.0E-06 CGCATGACGTCATACA 16
V_CMYB_Q5_M01821 TRANSFAC + 36119735 36119745 1.0E-06 CCCAACTGACT 11
V_AP4_Q6_02_M01860 TRANSFAC + 36119359 36119371 5.0E-06 TCAGCTGTGGCCC 13
V_ATF4_Q2_M00514 TRANSFAC - 36119912 36119923 6.0E-06 CATGACGTCATA 12
V_NFY_Q6_01_M00775 TRANSFAC - 36119851 36119863 9.0E-06 TATAGGCCAATCA 13
V_TCFAP2E_04_M02926 TRANSFAC + 36119340 36119353 0.0E+00 TACGGGAAAAAAAA 14
V_PAX4_01_M00373 TRANSFAC + 36119914 36119934 6.0E-06 TGACGTCATGCGCCAGCGCCC 21
V_BARBIE_01_M00238 TRANSFAC - 36119453 36119467 1.0E-05 ATTTAAAGATGAGAG 15
V_RUNX1_01_M02257 TRANSFAC - 36119536 36119546 5.0E-06 ACCTGTGGTTT 11
V_GADP_01_M01258 TRANSFAC + 36119646 36119657 9.0E-06 AACTTCCGGCGC 12
V_ELK1_02_M00025 TRANSFAC - 36119645 36119658 9.0E-06 CGCGCCGGAAGTTT 14
V_KLF7_03_M02773 TRANSFAC - 36119870 36119885 9.0E-06 TTGGCCACACCCTCAG 16
V_ATF3_Q6_M00513 TRANSFAC + 36119911 36119924 7.0E-06 GTATGACGTCATGC 14
V_STAT3_03_M01595 TRANSFAC - 36119524 36119539 1.0E-06 GTTTCCAGGAAGACCG 16
V_STAT3_03_M01595 TRANSFAC + 36119527 36119542 7.0E-06 TCTTCCTGGAAACCAC 16
V_KAISO_01_M01119 TRANSFAC + 36119693 36119702 7.0E-06 TTCCTGCGAT 10
V_VJUN_01_M00036 TRANSFAC + 36119910 36119925 8.0E-06 TGTATGACGTCATGCG 16
V_VJUN_01_M00036 TRANSFAC - 36119910 36119925 4.0E-06 CGCATGACGTCATACA 16
V_CAAT_01_M00254 TRANSFAC - 36119851 36119862 9.0E-06 ATAGGCCAATCA 12
V_ALPHACP1_01_M00687 TRANSFAC - 36119888 36119898 7.0E-06 GAGCCAATGAG 11
V_NFYC_Q5_M02107 TRANSFAC - 36119847 36119860 1.0E-06 AGGCCAATCAGAGT 14
V_HEN1_02_M00058 TRANSFAC + 36119352 36119373 9.0E-06 AAAAGGGTCAGCTGTGGCCCAA 22
V_T3R_Q6_M00963 TRANSFAC - 36119376 36119384 7.0E-06 CCTGTCCTT 9
V_ATF1_03_M02738 TRANSFAC + 36119910 36119925 5.0E-06 TGTATGACGTCATGCG 16
V_ATF2_Q5_M01862 TRANSFAC - 36119913 36119924 1.0E-06 GCATGACGTCAT 12
V_NFY_01_M00287 TRANSFAC - 36119847 36119862 1.0E-06 ATAGGCCAATCAGAGT 16
V_NFY_01_M00287 TRANSFAC - 36119885 36119900 8.0E-06 GAGAGCCAATGAGATT 16
V_STAT1STAT1_Q3_M01212 TRANSFAC - 36119527 36119539 0.0E+00 GTTTCCAGGAAGA 13
V_T3RBETA_Q6_01_M02119 TRANSFAC - 36119834 36119850 3.0E-06 GAGTGAGAGAAGGACAC 17
V_SRF_Q4_M00810 TRANSFAC + 36119369 36119386 3.0E-06 CCCAAGAAAGGACAGGGA 18
V_SRF_02_M01257 TRANSFAC + 36119368 36119385 6.0E-06 GCCCAAGAAAGGACAGGG 18
V_SRF_06_M02916 TRANSFAC + 36119343 36119359 2.0E-06 GGGAAAAAAAAAAGGGT 17
V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC - 36119536 36119543 1.0E-05 TGTGGTTT 8
V_EKLF_Q5_M01874 TRANSFAC - 36119872 36119881 5.0E-06 CCACACCCTC 10
V_CREB_02_M00113 TRANSFAC - 36119947 36119958 8.0E-06 AGGATGACGTCC 12
V_NFYA_Q5_M02106 TRANSFAC - 36119847 36119860 2.0E-06 AGGCCAATCAGAGT 14
V_NFYA_Q5_M02106 TRANSFAC - 36119885 36119898 1.0E-05 GAGCCAATGAGATT 14
V_ATF_B_M00338 TRANSFAC - 36119911 36119922 9.0E-06 ATGACGTCATAC 12
V_TCF3_05_M02920 TRANSFAC + 36119341 36119355 0.0E+00 ACGGGAAAAAAAAAA 15
V_TCF3_05_M02920 TRANSFAC + 36119342 36119356 7.0E-06 CGGGAAAAAAAAAAG 15
V_COUP_DR1_Q6_M00765 TRANSFAC - 36119701 36119713 9.0E-06 GGACCTTTGAGAT 13
V_STAT1_05_M01260 TRANSFAC - 36119519 36119540 2.0E-06 GGTTTCCAGGAAGACCGGAGAC 22
V_STAT1_05_M01260 TRANSFAC + 36119526 36119547 1.0E-06 GTCTTCCTGGAAACCACAGGTC 22
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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